ViewGene

Locus Name:
GeneID:
Location:

GeneID:6304
TrivialName: PA14_21950
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_21950
PAO1 Ortholog Locus:
Sequence Length:1869
Protein Length:622
Start: 1908722
Stop: 1910590
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 116/390 (29%), Positives = 154/390 (39%), Gaps = 66/390 (16%)
Sequence:
GTGGGCGGCGCCGAGGATTTCGCAGAGCGTGCCGCAGAGGTCGGTCTGCAGCGGTTGCGCCAGGTCGTCGCG
GCTGAAGGCGTCGCCGAAGACGAACAGCGGCACCTCGCGCTCCTCCTCGAGGATGCCGCCGTGGCTGCGGTC
CTCGTTCATTCCGTGATCGGCGGTGATCGCCACCTGGTAGCCGGCCGCCAGCCACTGGTGCAGGTATTCCGA
CAGCAGCGCGTCGGCGCGCCGCGCGGCGTTGCGGTAGGCGGGGCTGGCGAGGCCGTGCCTGTGCCCGGCGTC
GTCGATGTTCATCGAGTGGACCAGCATGAAGTTCGGTGCGTGCCGGCGGCGCAGGCTTTCCGCATCGGCGAA
CAGGTGCGAGTCCGGATAGTGGTCGTTCCAGTAGAAGTGTCCGCGCTGGATCGGCAGTGCGCTGTCGTCGGT
GTGGCGGTCGCGGGCCGGGTCGAACGGCGTGCGGTTGTACAGTTCGCTGACCCAGTGGTAGGCCGCTGCCGC
GGTACTCAGGCCGGCCGCGCGGGCATAGTGGAACAGGCTCTGTTCCTGGCTCAGGCGGACCACGTCGTTGTG
CAGGATGCCGCTATCGATCGGCGGCACTCCGGTGAGGATACATTCGTAGAGCGGCCGGGACAGCGAAGGCAA
CTCGCATTCCAGGCGGTACGACTGGCCGCGGCCGGCGCCGCAGAGGGCCTGGAGATGCCCCATGCAGTCGCG
GGCGACGCTGTGGTTGAGGCCGTCCAGCAGGACGAGGATGACGTCGTGGCGCATTCGGGGTATCCGTCGATG
CGGGGCGGCCGCCGGCGAGGGCGGCCGCGCTCCGCGTCACTGCATGTTGATGATCACCGCTTCCTGCCACTG
CCGCGGCAGGCGCTTGGAGGTTTCCTCCCAGGCCTTGGCGTCCTTGATCGGCTGGGCCTTGGCGTACTGCTC
GTTGGGCAGCAGTTGGGCCTTCACGTCGTCCGGCAGGGTCAGGCTCTCGGCGCGGATCGGTCGCGCGTTGCC
CTTGGCCAGGTTGATCTGTCCGGCGTCGCTGAAGATGTACTCGCGGGCGAGCTTGGCGGCGTTCGGGTGCTT
GGCGTACTTGTTGATGATGGTGGTGTAGCCGGAGATCACCGAGCCGTCCGAGGGGATCAGCACCTCGAAGCG
CTCCGGGTCGATCTGCTGGCGGTAGCTGAGGCCGTTGAAGTCCCAGACGATGCCGACTTCGACCTCGCCCTT
TTCCAGGGTGGCGATCACCGGGTTGGTCAGCGACAGGCGGCCCTGCTTGGCGATCTTGCCGAAGAACTCCAG
GCCCGGCTTGATGTTCTTCTCGTCGCCGCCGTTGGCGATGGCCGCGGCGAGCACCCCATTGACCGCCTGGGC
GGCAGCGCTGACGTCGCCGATGGTGACCTTGTACTTGCCCTGCAGCAGGTCGGCCCAGCTGTGCGGTACGTC
CTTCACCAGTTGTTTGTTGACGATGAAGGCGATGGTCCCGGTGTAGGCGAGCGCCCAGTGGCCGTCCTGGTC
TTTGGCCCAGGCCGGGATCTGTTCCCAGGTGCTCGGCTTGTACGGCTGGCTGACGCCCTGCTGCACGGCGAT
GGGGCCGAAGGCGGCGCCGACGTCGCCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCCTTGAACTTGGCCAG
CTCCTGGGCCGAACTCATGTCGGTATCCATGTGCTTGAGCCCATACTTGCTCTCAAGGTCCTTCCAGGTGTC
CTTCCAGTTCGCCCAGCTGTCGGGCATGCCGACGCTGTTGACCTGGCCTTCCTTGCGCGCGGCCTGTTCCAG
CGCCTGCAGGTCCGCTTCGGCGGCCAACGCCAGGCCGCTGCCGAGGGCGATGGCGGTTCCCAGCAATGA
Translation:
MGGAEDFAERAAEVGLQRLRQVVAAEGVAEDEQRHLALLLEDAAVAAVLVHSVIGGDRHLVAGRQPLVQVFR
QQRVGAPRGVAVGGAGEAVPVPGVVDVHRVDQHEVRCVPAAQAFRIGEQVRVRIVVVPVEVSALDRQCAVVG
VAVAGRVERRAVVQFADPVVGRCRGTQAGRAGIVEQALFLAQADHVVVQDAAIDRRHSGEDTFVERPGQRRQ
LAFQAVRLAAAGAAEGLEMPHAVAGDAVVEAVQQDEDDVVAHSGYPSMRGGRRRGRPRSASLHVDDHRFLPL
PRQALGGFLPGLGVLDRLGLGVLLVGQQLGLHVVRQGQALGADRSRVALGQVDLSGVAEDVLAGELGGVRVL
GVLVDDGGVAGDHRAVRGDQHLEALRVDLLAVAEAVEVPDDADFDLALFQGGDHRVGQRQAALLGDLAEELQ
ARLDVLLVAAVGDGRGEHPIDRLGGSADVADGDLVLALQQVGPAVRYVLHQLFVDDEGDGPGVGERPVAVLV
FGPGRDLFPGARLVRLADALLHGDGAEGGADVADVGAGVVLLGLELGQLLGRTHVGIHVLEPILALKVLPGV
LPVRPAVGHADAVDLAFLARGLFQRLQVRFGGQRQAAAEGDGGSQQ*
AnnotationID:6305GeneID:6304
AnnotatorUID: diggins
Modification Date/Time: 2005-04-14 14:02:12
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16101
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29720
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49306How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3045209Stop: 3043341
Length: 1869
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGCGGCGCCGAGGATTTCGCAGAGCGTGCCGCAGAGGTCGGTCTGCAGCGGTTGCGCCAGGTCGTCGCG
GCTGAAGGCGTCGCCGAAGACGAACAGCGGCACCTCGCGCTCCTCCTCGAGGATGCCGCCGTGGCTGCGGTC
CTCGTTCATTCCGTGATCGGCGGTGATCGCCACCTGGTAGCCGGCCGCCAGCCACTGGTGCAGGTATTCCGA
CAGCAGCGCGTCGGCGCGCCGCGCGGCGTTGCGGTAGGCGGGGCTGGCGAGGCCGTGCCTGTGCCCGGCGTC
GTCGATGTTCATCGAGTGGACCAGCATGAAGTTCGGTGCGTGCCGGCGGCGCAGGCTTTCCGCATCGGCGAA
CAGGTGCGAGTCCGGATAGTGGTCGTTCCAGTAGAAGTGTCCGCGCTGGATCGGCAGTGCGCTGTCGTCGGT
GTGGCGGTCGCGGGCCGGGTCGAACGGCGTGCGGTTGTACAGTTCGCTGACCCAGTGGTAGGCCGCTGCCGC
GGTACTCAGGCCGGCCGCGCGGGCATAGTGGAACAGGCTCTGTTCCTGGCTCAGGCGGACCACGTCGTTGTG
CAGGATGCCGCTATCGATCGGCGGCACTCCGGTGAGGATACATTCGTAGAGCGGCCGGGACAGCGAAGGCAA
CTCGCATTCCAGGCGGTACGACTGGCCGCGGCCGGCGCCGCAGAGGGCCTGGAGATGCCCCATGCAGTCGCG
GGCGACGCTGTGGTTGAGGCCGTCCAGCAGGACGAGGATGACGTCGTGGCGCATTCGGGGTATCCGTCGATG
CGGGGCGGCCGCCGGCGAGGGCGGCCGCGCTCCGCGTCACTGCATGTTGATGATCACCGCTTCCTGCCACTG
CCGCGGCAGGCGCTTGGAGGTTTCCTCCCAGGCCTTGGCGTCCTTGATCGGCTGGGCCTTGGCGTACTGCTC
GTTGGGCAGCAGTTGGGCCTTCACGTCGTCCGGCAGGGTCAGGCTCTCGGCGCGGATCGGTCGCGCGTTGCC
CTTGGCCAGGTTGATCTGTCCGGCGTCGCTGAAGATGTACTCGCGGGCGAGCTTGGCGGCGTTCGGGTGCTT
GGCGTACTTGTTGATGATGGTGGTGTAGCCGGAGATCACCGAGCCGTCCGAGGGGATCAGCACCTCGAAGCG
CTCCGGGTCGATCTGCTGGCGGTAGCTGAGGCCGTTGAAGTCCCAGACGATGCCGACTTCGACCTCGCCCTT
TTCCAGGGTGGCGATCACCGGGTTGGTCAGCGACAGGCGGCCCTGCTTGGCGATCTTGCCGAAGAACTCCAG
GCCCGGCTTGATGTTCTTCTCGTCGCCGCCGTTGGCGATGGCCGCGGCGAGCACCCCATTGACCGCCTGGGC
GGCAGCGCTGACGTCGCCGATGGTGACCTTGTACTTGCCCTGCAGCAGGTCGGCCCAGCTGTGCGGTACGTC
CTTCACCAGTTGTTTGTTGACGATGAAGGCGATGGTCCCGGTGTAGGCGAGCGCCCAGTGGCCGTCCTGGTC
TTTGGCCCAGGCCGGGATCTGTTCCCAGGTGCTCGGCTTGTACGGCTGGCTGACGCCCTGCTGCACGGCGAT
GGGGCCGAAGGCGGCGCCGACGTCGCCGATGTCGGCGCTGGCGTTGTCCTTCTCGGCCTTGAACTTGGCCAG
CTCCTGGGCCGAACTCATGTCGGTATCCATGTGCTTGAGCCCATACTTGCTCTCAAGGTCCTTCCAGGTGTC
CTTCCAGTTCGCCCAGCTGTCGGGCATGCCGACGCTGTTGACCTGGCCTTCCTTGCGCGCGGCCTGTTCCAG
CGCCTGCAGGTCCGCTTCGGCGGCCAACGCCAGGCCGCTGCCGAGGGCGATGGCGGTTCCCAGCAATGA