ViewGene
Locus Name:
GeneID:
Location:

GeneID:6284
TrivialName: PA14_22810
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_22810
PAO1 Ortholog Locus:
Sequence Length:933
Protein Length:310
Start: 1981950
Stop: 1981018
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGCTGGGGATTTTCCGGATGGATCTGGAAGAACTGGCTCATTCGGCCCCCTTGGCTTCGGAATGACGTTC
GGTATCGCGAAAATGCCTGGCGAAACGCGGCCACATGGCCGGAAGGTCCTCTGGAACCGCACGGTACATGCC
CAGTTCGGACCAGTCGCCCGGCGCGTGGAAATCGCTGCCGGCGGTGACCATCAGGCCGAACTCGCGGGCCAG
GATCGACAGGGTACCGACCTGTTCGGCCGGCTGCACCCCATTGACCACCTCGATGGCGTGTCCACCGGCCTG
GAGAAAGTCGGCGACCAGGCGCCGGCGCTTGGTCCGGGTGAAATCATAATGGTACGGGTGCGCCAGGCTGAT
CCAGGCGCGCGCCTCGCGCAGGCAGCCGACCACTTCCTCCAGGGTCGGCCAGTGCTGCTTGACGTCTCCCAG
CTTGCCGGCCCCCAGCCATTTGCGGAACGCGTCGGCGCGATCCTTGACCCAGCCGCCCTGGACCAGGAACTC
GGCGAAATGCGGCCGCGCCGGCGCGTTGCCGCTGTCGCCCAGGGCCCGCTGGATCGCCCGCGCGCCCTCCAG
CGCCCCGGGCATACCCTTGGCCGCCAGCCGTCGGTCGATTTCCTCGGCGCGCGCCCAGCGGCCGCGGTGCAG
GGCTTCAGTGGCCTGGCGCAGGGGAGCGGCGTCGAGGTCGAAACCGTAGCCCAGCACATGGATGGTGGCGCC
ACCCCAGGTGCAGGACAGCTCGACGCCGTTGACCAGTTCGATACTGAGTCGAGCGGCCGCCTGGTGGGCTTC
CGGCAAGCCTTCCAGGGTGTCGTGGTCGGTCAGCGCCAGCAGCCCGACGCCTTTCTCGTGGGCCCGCTGCAC
CAGGGCGGCGGGCGCGAGAACGCCATCGGAGGCGGTACTGTGGCAATGCAGATCGACACGCATGGCTGA
Translation:
MAGDFPDGSGRTGSFGPLGFGMTFGIAKMPGETRPHGRKVLWNRTVHAQFGPVARRVEIAAGGDHQAELAGQ
DRQGTDLFGRLHPIDHLDGVSTGLEKVGDQAPALGPGEIIMVRVRQADPGARLAQAADHFLQGRPVLLDVSQ
LAGPQPFAERVGAILDPAALDQELGEMRPRRRVAAVAQGPLDRPRALQRPGHTLGRQPSVDFLGARPAAAVQ
GFSGLAQGSGVEVETVAQHMDGGATPGAGQLDAVDQFDTESSGRLVGFRQAFQGVVVGQRQQPDAFLVGPLH
QGGGRENAIGGGTVAMQIDTHG*
AnnotationID:6285GeneID:6284
AnnotatorUID: diggins
Modification Date/Time: 2005-04-14 07:07:17
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16084




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29682




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49286How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2971981Stop: 2972913

          
Length: 933


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGGCTGGGGATTTTCCGGATGGATCTGGAAGAACTGGCTCATTCGGCCCCCTTGGCTTCGGAATGACGTTC 
GGTATCGCGAAAATGCCTGGCGAAACGCGGCCACATGGCCGGAAGGTCCTCTGGAACCGCACGGTACATGCC 
CAGTTCGGACCAGTCGCCCGGCGCGTGGAAATCGCTGCCGGCGGTGACCATCAGGCCGAACTCGCGGGCCAG 
GATCGACAGGGTACCGACCTGTTCGGCCGGCTGCACCCCATTGACCACCTCGATGGCGTGTCCACCGGCCTG 
GAGAAAGTCGGCGACCAGGCGCCGGCGCTTGGTCCGGGTGAAATCATAATGGTACGGGTGCGCCAGGCTGAT 
CCAGGCGCGCGCCTCGCGCAGGCAGCCGACCACTTCCTCCAGGGTCGGCCAGTGCTGCTTGACGTCTCCCAG 
CTTGCCGGCCCCCAGCCATTTGCGGAACGCGTCGGCGCGATCCTTGACCCAGCCGCCCTGGACCAGGAACTC 
GGCGAAATGCGGCCGCGCCGGCGCGTTGCCGCTGTCGCCCAGGGCCCGCTGGATCGCCCGCGCGCCCTCCAG 
CGCCCCGGGCATACCCTTGGCCGCCAGCCGTCGGTCGATTTCCTCGGCGCGCGCCCAGCGGCCGCGGTGCAG 
GGCTTCAGTGGCCTGGCGCAGGGGAGCGGCGTCGAGGTCGAAACCGTAGCCCAGCACATGGATGGTGGCGCC 
ACCCCAGGTGCAGGACAGCTCGACGCCGTTGACCAGTTCGATACTGAGTCGAGCGGCCGCCTGGTGGGCTTC 
CGGCAAGCCTTCCAGGGTGTCGTGGTCGGTCAGCGCCAGCAGCCCGACGCCTTTCTCGTGGGCCCGCTGCAC 
CAGGGCGGCGGGCGCGAGAACGCCATCGGAGGCGGTACTGTGGCAATGCAGATCGACACGCATGGCTGA