ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6279

TrivialName: PA14_22950

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_22950

PAO1 Ortholog Locus:

Sequence Length: 1677

Protein Length: 558

Start: 1990290

Stop: 1991966

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD55362.1| (AL939124) probable translational initiation factor [Streptomyces coelicolor A3(2)] Identities = 119/407 (29%), Positives = 139/407 (34%), Gaps = 75/407 (18%)

Sequence:

GTGGCTACCTGCTGGCGGCGCAGGTGCGGCCGCACCTGCAGCCATGAGCGAACGGCGGCGCTGGTCGCCGGT
GCCGCGCTCGCTGCTCGGGCGCATGCTGCTCCTGACCCTGCTCGCGGTGCTGGTCGCGCAAGGGCTTTCCAG
CCTGTTCTGGCTGTCGCACCTGCGCTCCAGCCAGCGCGAGGGCCTGCTCACCAGCTCGCGCAGCCTGGCCTA
CTCGATGGCGGCCAGCGTCAGCTACTTCCGTTCCCTGCCGCTCGGCTACCGTCCGCTGGTGCTCGACCAGTT
GCGCAGCATGGGCGGTACGCGCTTCTTCGTCTCGCTGAACGACCGGCCGCTGGAGATGCGTGCCCTGCCGGA
CACGCCGAACAAGCAGGCGGTGCTGGAGATCGTCCAGGACGTGTTGCATCAACGCCTGGGCAAGGAGGTCGA
GCTGCAGGTCGAATTCGTCAGTCCCGACGAGCTGCGCCTGTTCAACGGCGCGCTGAAGCTCGACGAGCTGCC
GCGTTCCTGGGCGCACTACGCGCTGACCCTGGAGCCGGTGAACCCGCCGGTGCTGGTGACCCAGATCCGCAT
CGGCGACAGCGAGTGGCTGTACATCGCCAGCCTGATGCCGGCGCCGTACGTCAGCCTGGAACCCGAGGGACT
GCAACCGCAGCAGGTGCTCTCGATCGTTTTCACCAGCCTGTTGCTGCTGCTTTTCACCGGCTTGCTGATGCA
TTGGCAGAGCCGTCCGCTCAAGCGCCTGGCGCGCGCCGCCCGCGACCTGGCCCTGGGCAGTCCGTCGGCAGC
GCTGGAGGAACGCGGCGCCAGCGAACTGGTGGAGGTGGCGCGCGCCTTCAACACCATGCACGAGCGCATCGA
CCGCTACCTGAACGAGCGCGGGCAGTTGTTCAGCGCCATCTCCCACGACCTGCGCACGCCGATCACCCGCCT
GCGCCTGCGGGTAGAACTCCTCGAGGACGAGCGCTTGCAGGAGAAGTTCGGGCGCGACCTGGACGAGCTGGA
ACTGCTGGTGAAGGGCGCGCTGCAGTGCGTGAAGGACACCGATATCCACGAGAACGTCGAGCCGGTCGACCT
CAACCTGTTGCTCCAGCACATCGCCGAGCCCTACCTGGCCGATGGCCGGGTGGAGGTCGTCGGTCGCGCCGC
GGAGCCTTATCCGGGCAAGCCCCTGGCGCTCAAGCGCTGTATCGGCAACCTGCTGGACAATGCGCTGAAATA
CGGCGAACGCGCCCGCCTGAGCCTGGAGGACGGACCGGAAGCGGTGGTGCTGCACGTCGACGACGACGGCCC
CGGCGTGCCCGAGCAGCGCCTGGAACAGATCTTCGAGCCGCGCTTCCGCCTGTCTCCGCGAGGGCAGGGCTA
CGGGCTGGGCCTGGGCATCGCGCGCAACATCGCGCACACCCATGGCGGCGAAGTCAGTTTGCAGAACCGTCG
CGAGGGCGGCCTGCGGGTCAGCCTGCGCTTGCCGCGCCTGGGGCTGGAGTGATGGGCTGGCTTGGCGGGCCC
TTGAACGAGGCAGGTAGGCACGAGGTTCTCCCGCGTTCTGTGGCAGCGGCAGACAGAGGCGGAGCGGGCGCT
ATGGCAGTGTTTGCGCGGGCATCGATTGCTCGGGCTGAAGTTTCGTCGGCAGAAGATACTCGGGCCGTACAT
CGTCGATTTCGTCTGTCATGA

Translation:

MATCWRRRCGRTCSHERTAALVAGAALAARAHAAPDPARGAGRARAFQPVLAVAPALQPARGPAHQLAQPGL
LDGGQRQLLPFPAARLPSAGARPVAQHGRYALLRLAERPAAGDACPAGHAEQAGGAGDRPGRVASTPGQGGR
AAGRIRQSRRAAPVQRRAEARRAAAFLGALRADPGAGEPAGAGDPDPHRRQRVAVHRQPDAGAVRQPGTRGT
ATAAGALDRFHQPVAAAFHRLADALAEPSAQAPGARRPRPGPGQSVGSAGGTRRQRTGGGGARLQHHARAHR
PLPERARAVVQRHLPRPAHADHPPAPAGRTPRGRALAGEVRARPGRAGTAGEGRAAVREGHRYPRERRAGRP
QPVAPAHRRALPGRWPGGGRRSRRGALSGQAPGAQALYRQPAGQCAEIRRTRPPEPGGRTGSGGAARRRRRP
RRARAAPGTDLRAALPPVSARAGLRAGPGHRAQHRAHPWRRSQFAEPSRGRPAGQPALAAPGAGVMGWLGGP
LNEAGRHEVLPRSVAAADRGGAGAMAVFARASIARAEVSSAEDTRAVHRRFRLS*

AnnotationID:6280 GeneID:6279

AnnotatorUID: diggins

Modification Date/Time: 2005-04-14 07:07:03

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16080

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29672