ViewGene

Locus Name:
GeneID:
Location:

GeneID:6278
TrivialName: PA14_22970
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_22970
PAO1 Ortholog Locus:
Sequence Length:1449
Protein Length:482
Start: 1993670
Stop: 1992222
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCGTTTTCTCGCGTGCGAAGGAACCCACCCGTGCCGCTCGGCGGCACGGAGCCAGTCGGGAGGATCGAGC
GGAGCCCAGGCCGGGCTCCGCGCCAGGGACTTACTGCGCCGCCGCCTCGATGGCGGCCGCCAGTTGCTGGGC
GGCCTTCTGCGGGTCCGCGGCGGGGTCGTTGAAGAAGTTGGTCACCACGTCGAAGATCGCCCCCTGCACGTA
GCTGGAAGCGGCCATGCTGTGGGCCATGCTCGGCACCAGGTTGCCGTCCTGGGAAGCCTGCTTGAAGTCCTT
CATCGACTGCTGGGCGCAACTGTCGAACGGCGCCATGTCGGCGTCCAGGCGAACCGGGATGGAGCCCTTGTT
GAGGTTGAAGTCCTTCTGGAAGGACGGATCGAGCACGCTGCGCGCCAGGTCTTCCTGGGCCTTGCGGTTCTC
CGCGTTGCTCAGCTTGAACATCACCAGCGAGTCGATGTTGTAGTCGAAGGCCTTCTGCGTGCCGGGGAACGG
CAGGCACTGGTAGTCCTTGCCCGGCACCTTGCCGGCGGCGGTGAATTCGCTCTTCGCCCAGTCGCCCATGAT
CTGCATCCCGGCCTTGCCGTTGATCACCATCGCCGTGGCGGCGCTCCATTCGCGACCGGCGGCGTCGGCATC
GACGTAGCCGCGGAGCTTCTTCAGCGCGGCGAACACCTCGACCATCTGCGCTCCGGTGAGGGTCGCCTTGTC
CTGTTCGACGAAGGCCTTGCGATAGCCTTCCGGACCCATCTTGCTCAGCACCAGGTTCTCGAACACGGTGCC
GTCCTGCCACGGTTGGCTGCCATGGGCCAGCGGCGTGAAACCGGCGGCCTTGAGCTTGTCGGCGGCGACGAA
CAGTTCGTCGAGGGTGGTCGGCGGGGTGGCGCCGGCCTTCTTGAACACTTCCGGGTTGATGTAGAGCCAGTT
GACCCGGTGTACGTTGATCGGCACTGCTACGTAGTCGCCGTCGTACTTCATGATCTGCGCCACCTGCTTCGG
CAGCAGGCTGTCCCACTTGCCTTCGGCGGCCACCGCGTTGAGGTCGGCGAGCAGGCCCAGTTCGCCCCACTC
CTGGATATCCGGCCCCTTGATCTGCGCCGCGGCCGGCGGATTGCCGGACACCGCGCGGGTCTTCAGCACCGT
CATCGCCGCCTCGCCGCCACCGCCGGCCACGGCGAAGTCCTTCCAGGTGTGGCCCTTGGCTTCGACCAGCTT
CTTCAGGGTTTCGGCGGCGCGCTTCTCGCCGGCGGAGGTCCACCAGTGCAGCACTTCGACTTCGCCGGCCTG
GGCCAGCAGCGGGGAGAGACAGAGGGAGGAAAGACAGATGACGGCAGAGAGGCGACGGATCGCATTCATGAG
GAAAACCTTCTTCTTGTTATTCGGAGCAAGTCTGCGCTTGCAATGCTTCGAGTCTATTCAAGCGTTCCGCGT
CGCGGGTAA
Translation:
MRFLACEGTHPCRSAARSQSGGSSGAQAGLRARDLLRRRLDGGRQLLGGLLRVRGGVVEEVGHHVEDRPLHV
AGSGHAVGHARHQVAVLGSLLEVLHRLLGATVERRHVGVQANRDGALVEVEVLLEGRIEHAARQVFLGLAVL
RVAQLEHHQRVDVVVEGLLRAGERQALVVLARHLAGGGEFALRPVAHDLHPGLAVDHHRRGGAPFATGGVGI
DVAAELLQRGEHLDHLRSGEGRLVLFDEGLAIAFRTHLAQHQVLEHGAVLPRLAAMGQRRETGGLELVGGDE
QFVEGGRRGGAGLLEHFRVDVEPVDPVYVDRHCYVVAVVLHDLRHLLRQQAVPLAFGGHRVEVGEQAQFAPL
LDIRPLDLRRGRRIAGHRAGLQHRHRRLAATAGHGEVLPGVALGFDQLLQGFGGALLAGGGPPVQHFDFAGL
GQQRGETEGGKTDDGREATDRIHEENLLLVIRSKSALAMLRVYSSVPRRG*
AnnotationID:6279GeneID:6278
AnnotatorUID: diggins
Modification Date/Time: 2005-04-14 06:06:12
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12398
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29670
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49280How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2960261Stop: 2961709
Length: 1449
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCGTTTTCTCGCGTGCGAAGGAACCCACCCGTGCCGCTCGGCGGCACGGAGCCAGTCGGGAGGATCGAGC
GGAGCCCAGGCCGGGCTCCGCGCCAGGGACTTACTGCGCCGCCGCCTCGATGGCGGCCGCCAGTTGCTGGGC
GGCCTTCTGCGGGTCCGCGGCGGGGTCGTTGAAGAAGTTGGTCACCACGTCGAAGATCGCCCCCTGCACGTA
GCTGGAAGCGGCCATGCTGTGGGCCATGCTCGGCACCAGGTTGCCGTCCTGGGAAGCCTGCTTGAAGTCCTT
CATCGACTGCTGGGCGCAACTGTCGAACGGCGCCATGTCGGCGTCCAGGCGAACCGGGATGGAGCCCTTGTT
GAGGTTGAAGTCCTTCTGGAAGGACGGATCGAGCACGCTGCGCGCCAGGTCTTCCTGGGCCTTGCGGTTCTC
CGCGTTGCTCAGCTTGAACATCACCAGCGAGTCGATGTTGTAGTCGAAGGCCTTCTGCGTGCCGGGGAACGG
CAGGCACTGGTAGTCCTTGCCCGGCACCTTGCCGGCGGCGGTGAATTCGCTCTTCGCCCAGTCGCCCATGAT
CTGCATCCCGGCCTTGCCGTTGATCACCATCGCCGTGGCGGCGCTCCATTCGCGACCGGCGGCGTCGGCATC
GACGTAGCCGCGGAGCTTCTTCAGCGCGGCGAACACCTCGACCATCTGCGCTCCGGTGAGGGTCGCCTTGTC
CTGTTCGACGAAGGCCTTGCGATAGCCTTCCGGACCCATCTTGCTCAGCACCAGGTTCTCGAACACGGTGCC
GTCCTGCCACGGTTGGCTGCCATGGGCCAGCGGCGTGAAACCGGCGGCCTTGAGCTTGTCGGCGGCGACGAA
CAGTTCGTCGAGGGTGGTCGGCGGGGTGGCGCCGGCCTTCTTGAACACTTCCGGGTTGATGTAGAGCCAGTT
GACCCGGTGTACGTTGATCGGCACTGCTACGTAGTCGCCGTCGTACTTCATGATCTGCGCCACCTGCTTCGG
CAGCAGGCTGTCCCACTTGCCTTCGGCGGCCACCGCGTTGAGGTCGGCGAGCAGGCCCAGTTCGCCCCACTC
CTGGATATCCGGCCCCTTGATCTGCGCCGCGGCCGGCGGATTGCCGGACACCGCGCGGGTCTTCAGCACCGT
CATCGCCGCCTCGCCGCCACCGCCGGCCACGGCGAAGTCCTTCCAGGTGTGGCCCTTGGCTTCGACCAGCTT
CTTCAGGGTTTCGGCGGCGCGCTTCTCGCCGGCGGAGGTCCACCAGTGCAGCACTTCGACTTCGCCGGCCTG
GGCCAGCAGCGGGGAGAGACAGAGGGAGGAAAGACAGATGACGGCAGAGAGGCGACGGATCGCATTCATGAG
GAAAACCTTCTTCTTGTTATTCGGAGCAAGTCTGCGCTTGCAATGCTTCGAGTCTATTCAAGCGTTCCGCGT
CGCGGGTAA