ViewGene

Locus Name:
GeneID:
Location:

GeneID:6273
TrivialName: PA14_23180
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_23180
PAO1 Ortholog Locus:
Sequence Length:1674
Protein Length:557
Start: 2008056
Stop: 2009729
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGTCGACGGATTGCAGGAAGCTGTCGAGGAAGGCTTCGCTGCGTTCCAGGTTCCAAGGCTGCAACTGGCG
GTCCAGCAGGTAGCGCACACCCAGGCGCTGGGCCTGGTCGAACAGCGCCGCGGTGTTGCTCAGGCGGCTGAT
GCCCAGGCAGCAGTAGGCGAACGGCCAGTCGCTGGCCTGGCAGAGTTCGGCGATCTGGCGGAACGGCGTGCC
GGAGCTGGCCCGTTCGGCGTGGCGCAGGTCGAAATGCGCGTCGAAATTGAGGATACCGATGCGCGGCAGGCG
CTCATGCCGACTCAAGTGGCGGGCGAGGCCGGCGAAGCTGGCGTAGGCGATTTCGTGGCCGCCGCCCAGGCC
GACCACCCGGTGGCCGCGCGCGAGCAGGTCGGCGACGCGTTGCGCGTAGCATTCCTGGGCGGCTTCCAGATC
GTCGCCGGCGACGATGTCGCCGGCATCGTAGATCGCTTGCTCGCCGTGCCAGGCCAGGTTGGCCAGCGCGCG
ACGCAAGGCTGGCGGTCCGTGGCGCGCGCCCTGGCGACCCTGGTTGCGGCGCACGCCTTCGTCGCTGGCGAA
ACCGAGCAGCACGCTGGCCGCTTCGGCGTCGTCTGCGTAGGGGCGCATCCATTGGTGCCAGCGCCGCGCGTC
GGCGCCTTCCTGGCTATCGATCCGGCCTTGCCAGAGGCTCATGTCGGGGGCGGGGTACATCGAAACTCCTGT
TGGTCAGTCCAGCCGCGCGGAAAGTCGCGCGGCGGCGTCGAGGGTCCATTGCCGCAAGCGTTCGCTGCGCGA
CTGGGCGCGCAAGGCGGGGGCCATCAGGCTGAGGGCGCCGTGCAGGCGCTGGCGGCTGTCCAGCAGCGGTAC
GCTGATGCCCCAGACGCCTTCGTCGATCTCGCCCTGGCTGACGGCGTAGCCCTGTTCGCGGATCAGCCGGAG
TTCCTGCTCCAGCTTGTCGATACGCTCGGCGGAGAATTCCTGGGCGAGGTACAGCTCCTCGCGCCGTTCGTC
CTCCAGGTGCGCCAGCAGGGCTTTGGCCGAGGCGCCATGCAACAGCGGCTGCGCCAGCCCTTTCTGGTAGCA
GCAGCGCAGCGGCTGCGGACTGTCGAACAGTTCCAGGCAGATCGCCTGCTGGTTGCTGGCCACCATCAGCGC
CACGCTCTCCTGGCTCAGGTCGGCCAGGCGCTTGAGTTCCGGTTTGGCGAGACCGATCAGCGAGGCCTCGCG
ATCGAATTTCTTCGCCAGTTGCAGGCAGGCCGGGCCGGGCAGGTAGCGGCCCTGGCCGGCCTGTTCTTCGGC
CAGGCCCCAGCGCAACAGGGTCTTCAGGTGCCGGTAGGTGCTGCTCAGCGGCTGCTCCAGGGTCAGCGACAG
CTCCTTGGCAGACAGGGCTTCGGGCGCCTGGCCAAGGGCAATGAGGATCTGCAGCAGGCGATCGGTGGGGGA
ATGCTTCGACATGGGAACTCCTTGACCCACAGGGTGAAGGCGATTTCCCGGAAAATGAAACCACTTTCCCAC
TCAGTGGGAAAAATATGTAAAAAGAATGGGAAGTTCCGGACGGGAAGAGGGAAGGGAAGGACAGGGCAGCCT
CGCCGGGCGGCGAGGCTGCCGGGGAATCACTGGGCGTCGAAGGCCTGGCCGTTGACGCCGGCGCTGTCCGGC
CCCATGAGGTACAGGTAG
Translation:
MVDGLQEAVEEGFAAFQVPRLQLAVQQVAHTQALGLVEQRRGVAQAADAQAAVGERPVAGLAEFGDLAERRA
GAGPFGVAQVEMRVEIEDTDARQALMPTQVAGEAGEAGVGDFVAAAQADHPVAAREQVGDALRVAFLGGFQI
VAGDDVAGIVDRLLAVPGQVGQRATQGWRSVARALATLVAAHAFVAGETEQHAGRFGVVCVGAHPLVPAPRV
GAFLAIDPALPEAHVGGGVHRNSCWSVQPRGKSRGGVEGPLPQAFAARLGAQGGGHQAEGAVQALAAVQQRY
ADAPDAFVDLALADGVALFADQPEFLLQLVDTLGGEFLGEVQLLAPFVLQVRQQGFGRGAMQQRLRQPFLVA
AAQRLRTVEQFQADRLLVAGHHQRHALLAQVGQALEFRFGETDQRGLAIEFLRQLQAGRAGQVAALAGLFFG
QAPAQQGLQVPVGAAQRLLQGQRQLLGRQGFGRLAKGNEDLQQAIGGGMLRHGNSLTHRVKAISRKMKPLSH
SVGKICKKNGKFRTGRGKGRTGQPRRAARLPGNHWASKAWPLTPALSGPMRYR*
AnnotationID:6274GeneID:6273
AnnotatorUID: diggins
Modification Date/Time: 2005-04-13 13:01:20
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16072
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29662
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49275How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2945875Stop: 2944202
Length: 1674
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGTCGACGGATTGCAGGAAGCTGTCGAGGAAGGCTTCGCTGCGTTCCAGGTTCCAAGGCTGCAACTGGCG
GTCCAGCAGGTAGCGCACACCCAGGCGCTGGGCCTGGTCGAACAGCGCCGCGGTGTTGCTCAGGCGGCTGAT
GCCCAGGCAGCAGTAGGCGAACGGCCAGTCGCTGGCCTGGCAGAGTTCGGCGATCTGGCGGAACGGCGTGCC
GGAGCTGGCCCGTTCGGCGTGGCGCAGGTCGAAATGCGCGTCGAAATTGAGGATACCGATGCGCGGCAGGCG
CTCATGCCGACTCAAGTGGCGGGCGAGGCCGGCGAAGCTGGCGTAGGCGATTTCGTGGCCGCCGCCCAGGCC
GACCACCCGGTGGCCGCGCGCGAGCAGGTCGGCGACGCGTTGCGCGTAGCATTCCTGGGCGGCTTCCAGATC
GTCGCCGGCGACGATGTCGCCGGCATCGTAGATCGCTTGCTCGCCGTGCCAGGCCAGGTTGGCCAGCGCGCG
ACGCAAGGCTGGCGGTCCGTGGCGCGCGCCCTGGCGACCCTGGTTGCGGCGCACGCCTTCGTCGCTGGCGAA
ACCGAGCAGCACGCTGGCCGCTTCGGCGTCGTCTGCGTAGGGGCGCATCCATTGGTGCCAGCGCCGCGCGTC
GGCGCCTTCCTGGCTATCGATCCGGCCTTGCCAGAGGCTCATGTCGGGGGCGGGGTACATCGAAACTCCTGT
TGGTCAGTCCAGCCGCGCGGAAAGTCGCGCGGCGGCGTCGAGGGTCCATTGCCGCAAGCGTTCGCTGCGCGA
CTGGGCGCGCAAGGCGGGGGCCATCAGGCTGAGGGCGCCGTGCAGGCGCTGGCGGCTGTCCAGCAGCGGTAC
GCTGATGCCCCAGACGCCTTCGTCGATCTCGCCCTGGCTGACGGCGTAGCCCTGTTCGCGGATCAGCCGGAG
TTCCTGCTCCAGCTTGTCGATACGCTCGGCGGAGAATTCCTGGGCGAGGTACAGCTCCTCGCGCCGTTCGTC
CTCCAGGTGCGCCAGCAGGGCTTTGGCCGAGGCGCCATGCAACAGCGGCTGCGCCAGCCCTTTCTGGTAGCA
GCAGCGCAGCGGCTGCGGACTGTCGAACAGTTCCAGGCAGATCGCCTGCTGGTTGCTGGCCACCATCAGCGC
CACGCTCTCCTGGCTCAGGTCGGCCAGGCGCTTGAGTTCCGGTTTGGCGAGACCGATCAGCGAGGCCTCGCG
ATCGAATTTCTTCGCCAGTTGCAGGCAGGCCGGGCCGGGCAGGTAGCGGCCCTGGCCGGCCTGTTCTTCGGC
CAGGCCCCAGCGCAACAGGGTCTTCAGGTGCCGGTAGGTGCTGCTCAGCGGCTGCTCCAGGGTCAGCGACAG
CTCCTTGGCAGACAGGGCTTCGGGCGCCTGGCCAAGGGCAATGAGGATCTGCAGCAGGCGATCGGTGGGGGA
ATGCTTCGACATGGGAACTCCTTGACCCACAGGGTGAAGGCGATTTCCCGGAAAATGAAACCACTTTCCCAC
TCAGTGGGAAAAATATGTAAAAAGAATGGGAAGTTCCGGACGGGAAGAGGGAAGGGAAGGACAGGGCAGCCT
CGCCGGGCGGCGAGGCTGCCGGGGAATCACTGGGCGTCGAAGGCCTGGCCGTTGACGCCGGCGCTGTCCGGC
CCCATGAGGTACAGGTAG