ViewGene

Locus Name:
GeneID:
Location:

GeneID:6267
TrivialName: PA14_23550
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_23550
PAO1 Ortholog Locus:
Sequence Length:1446
Protein Length:481
Start: 2052722
Stop: 2051277
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCCCGGTGATGGCCGGGAACATCAGCGGCATCACGTCGCGCAGCTTGAGCTGGAGGTGTTCGGCGACAGC
CTGGATGCAGCCGGTGATGCGTTCCTTCTCCCACTGGCGCAGGGATTCGAGTTTCCACAGCACCAGTTGCAG
AACCTGGCGGACCTGGGTCGGATCGAGCTTCTTGTGTTCGAACAGCGAAGCGTCCAGCGGCACCCCGCCGCT
GAAGAAGAATCCGGCCAGCGGTGCGATCTGGCTGAAGTTCTCCACCCGTCCCTGCACGTGCGGAGCGATCTT
CATCAGGTATTCGGGATTCAACGCCCACTTCTGCACCTCACGGGCGAACTCCTCCACGGACTGCTCGCGGAT
CCACTGCCCGTTCAGCCAGGAGAGCTTCTCCAGGTCGAAGATCGGTCCGCCCAGGGAGACGCGCGACAGGTC
GAAATGCTCGATCATCTCGGCGAGGGTGAATTTCTCGCGCTCGTCCGGCATCGACCAGCCCATCCGCCCAAG
GTAGTTGAGCAGCGCCTGCGGCAGGTAGCCCATGCGTTCGTAGAAGGTGATAGAGGTCGGGTTCTTGCGCTT
GGACAGCTTGCTCTTGTCCGGGTTGCGCAGCAGCGGCATGTAGCACAGCTGCGGCTGCTCCCAGCCGAAATA
CTCGTAGAGCTTGATCAGCTTGGGCGCCGACGGCAGCCACTCTTCGCCGCGCAGGACGTGGGTGATGCCCAT
CAGGTGGTCGTCGACCACGTTGGCGAGGAAGTAGGTGGGCAGGCCGTCGGCCTTCATCAGCACCTGCATGTC
CATGCGATCCCACGGAATCTCGACATCGCCGCGGAGCATGTCCGGCACCACGCAGACACCCTCGGTCGGCAC
CTTCATGCGGGTGACATGGGACTCGCCGGCGGCGAGGCGGCGCTGCACCTCATCCTTCGGCAGGTGCATGCA
GTGGCCGTCGTAGCGCGGGGTTTCCTTGCGCGCCATCTGCTCGGCGCGAACCGCATCGAGGCGCTCGGGCGT
GCAGAAGCAGGTGAAGGCATGGCCCTTCTCGACCAGTTCGTCCGAATACCTCTTGTAGATGTGCCCGCGCTC
GCTCTGCCGGTACGGGCCATGCGGGCCGCCGACGTCCGGGCCCTCGTCCCACTCGATGCCGAGCCAGCGCAG
GGCGTCGTAGATCTGCTGCTCGGACTCCCGCGTCGAACGCAGCTGGTCGGTGTCCTCGATGCGCAGGATGAA
CTGACCGCCGTGCTGACGCGCGAAGCACAGGTTGAACAGCGCGATGTATGCGGTACCGACGTGCGGGTCGCC
CGTCGGCGACGGGGCGATGCGAGTACGAACAGTGGTCATGGAGACTCTCTTGCCAAGCGGAAGTTAAAACGG
AAATTCAGGGGCGCGATGTTATCAGGCGGGCCGCCTCCGGCTCCAGTAAACGACCGGTGTCGGCCGGCAGGC
GGCTGA
Translation:
MPGDGREHQRHHVAQLELEVFGDSLDAAGDAFLLPLAQGFEFPQHQLQNLADLGRIELLVFEQRSVQRHPAA
EEESGQRCDLAEVLHPSLHVRSDLHQVFGIQRPLLHLTGELLHGLLADPLPVQPGELLQVEDRSAQGDARQV
EMLDHLGEGEFLALVRHRPAHPPKVVEQRLRQVAHAFVEGDRGRVLALGQLALVRVAQQRHVAQLRLLPAEI
LVELDQLGRRRQPLFAAQDVGDAHQVVVDHVGEEVGGQAVGLHQHLHVHAIPRNLDIAAEHVRHHADTLGRH
LHAGDMGLAGGEAALHLILRQVHAVAVVARGFLARHLLGANRIEALGRAEAGEGMALLDQFVRIPLVDVPAL
ALPVRAMRAADVRALVPLDAEPAQGVVDLLLGLPRRTQLVGVLDAQDELTAVLTREAQVEQRDVCGTDVRVA
RRRRGDASTNSGHGDSLAKRKLKRKFRGAMLSGGPPPAPVNDRCRPAGG*
AnnotationID:6268GeneID:6267
AnnotatorUID: diggins
Modification Date/Time: 2005-04-13 09:09:49
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12380
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29651
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49269How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2901209Stop: 2902654
Length: 1446
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCCGGTGATGGCCGGGAACATCAGCGGCATCACGTCGCGCAGCTTGAGCTGGAGGTGTTCGGCGACAGC
CTGGATGCAGCCGGTGATGCGTTCCTTCTCCCACTGGCGCAGGGATTCGAGTTTCCACAGCACCAGTTGCAG
AACCTGGCGGACCTGGGTCGGATCGAGCTTCTTGTGTTCGAACAGCGAAGCGTCCAGCGGCACCCCGCCGCT
GAAGAAGAATCCGGCCAGCGGTGCGATCTGGCTGAAGTTCTCCACCCGTCCCTGCACGTGCGGAGCGATCTT
CATCAGGTATTCGGGATTCAACGCCCACTTCTGCACCTCACGGGCGAACTCCTCCACGGACTGCTCGCGGAT
CCACTGCCCGTTCAGCCAGGAGAGCTTCTCCAGGTCGAAGATCGGTCCGCCCAGGGAGACGCGCGACAGGTC
GAAATGCTCGATCATCTCGGCGAGGGTGAATTTCTCGCGCTCGTCCGGCATCGACCAGCCCATCCGCCCAAG
GTAGTTGAGCAGCGCCTGCGGCAGGTAGCCCATGCGTTCGTAGAAGGTGATAGAGGTCGGGTTCTTGCGCTT
GGACAGCTTGCTCTTGTCCGGGTTGCGCAGCAGCGGCATGTAGCACAGCTGCGGCTGCTCCCAGCCGAAATA
CTCGTAGAGCTTGATCAGCTTGGGCGCCGACGGCAGCCACTCTTCGCCGCGCAGGACGTGGGTGATGCCCAT
CAGGTGGTCGTCGACCACGTTGGCGAGGAAGTAGGTGGGCAGGCCGTCGGCCTTCATCAGCACCTGCATGTC
CATGCGATCCCACGGAATCTCGACATCGCCGCGGAGCATGTCCGGCACCACGCAGACACCCTCGGTCGGCAC
CTTCATGCGGGTGACATGGGACTCGCCGGCGGCGAGGCGGCGCTGCACCTCATCCTTCGGCAGGTGCATGCA
GTGGCCGTCGTAGCGCGGGGTTTCCTTGCGCGCCATCTGCTCGGCGCGAACCGCATCGAGGCGCTCGGGCGT
GCAGAAGCAGGTGAAGGCATGGCCCTTCTCGACCAGTTCGTCCGAATACCTCTTGTAGATGTGCCCGCGCTC
GCTCTGCCGGTACGGGCCATGCGGGCCGCCGACGTCCGGGCCCTCGTCCCACTCGATGCCGAGCCAGCGCAG
GGCGTCGTAGATCTGCTGCTCGGACTCCCGCGTCGAACGCAGCTGGTCGGTGTCCTCGATGCGCAGGATGAA
CTGACCGCCGTGCTGACGCGCGAAGCACAGGTTGAACAGCGCGATGTATGCGGTACCGACGTGCGGGTCGCC
CGTCGGCGACGGGGCGATGCGAGTACGAACAGTGGTCATGGAGACTCTCTTGCCAAGCGGAAGTTAAAACGG
AAATTCAGGGGCGCGATGTTATCAGGCGGGCCGCCTCCGGCTCCAGTAAACGACCGGTGTCGGCCGGCAGGC
GGCTGA