ViewGene

Locus Name:
GeneID:
Location:

GeneID:6264
TrivialName: PA14_23710
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_23710
PAO1 Ortholog Locus:
Sequence Length:1437
Protein Length:478
Start: 2063452
Stop: 2062016
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAC32046.1| (AF034152) ExiT [Mycobacterium smegmatis]
Identities = 98/311 (31%), Positives = 115/311 (36%), Gaps = 54/311 (17%)
Sequence:
TTGGCGCTAAGCTCCGGGCAGCCGAAACCAGCGGAGGCCCGCAATGGACCTGAACAGCCTCAACACCTTCAT
CGCCATTGCCGAGACCGGCAGCTTCTCCGAGGCCGGCGAGCGCCTGCACCTGACCCAACCGGCGGTGAGCAA
GCGCATCGCCGCCCTCGAACAGCAGCTCAATGCCCGGCTGTTCGACCGGGTCGGCCGCGAGGTCAACCTCAC
CGAGGCCGGCCGCGCCCTGCTGCCGCGCGCCTATCAGTTGCTCAACGTGCTCGACGACACCCGCCGGGCGCT
GAACAACCTCACCGGCGAGGTCAGCGGCCGGCTGGTCCTGGCCACCAGCCACCACATCGGCCTGCATCGCCT
GCCGCCGCTGCTGCGCGCCTTCACCCGGGCGCATCCGCAGGTGGCGCTGGATATCCAGTTCCTGGATTCGGA
AGTGGCCTACGAGGAGATCCTTCATGGCCGTGCGGAACTGGCGGTGATCACCCTGGCCCCGGAAACCGCCGA
ACCGGTGCGCGCAGTCCCGGTGTGGGACGACCCGCTGGACTTCGTCGCCGCCCCGGAGCACCCGCTGGCCCG
ACAGGGCACGGTGTTCCTCGCCGACGTCGCCAAGCACCCCGCGGTATTCCCCGGCGGCAACACCTTCACCCA
CCACATCGTGCGGCGCATGTTCGAAGCCGAAGGGCTGACGCCGAACATCGCCATGAGCACCAACTACCTGGA
GACCATCAAGATGATGGTCTCCATCGGCCTGGCCTGGAGCGTGCTGCCGCGGACCATGCTCGACGACCAGGT
GGTGCGCCTGCCGCTACAGGACATCCAGCTCAGCCGCCAGCTCGGCTACATCCTGCACACCGAGCGGACCCT
GTCGAACGCCGCGCGCGCCTTCATGCGCCTGCTCGACGAACAGGCATTCGGCAACGGCACTCCAGCGGCCTG
AAGCGATTCAGGTCGAACGCCACGGGTAGGCCCTCCCCTCTTCGCCGTCCGCGGCCAGCGCTCACCCGACCT
GCATGCCAATGCCCTCGCGACTCAGCCCTCGCCGACCCACGCCTGCACCTCGACCTCCACGTCGACCCCCAG
CGCCAGCCCGGCGGTCACCGTCGAGCGTACCGGCAAGGCCCCCTGCACATGACGCTGGTAGACCTCGTTGAA
ACCGGCGAAGTGGGCCATGTCCGACAGCCAGACGGTGACCTTCACCAGTTGGTCGAAACGCGCGCCACAGCT
CTCCAGGGTCTCGCCGATGCGTGCCATCACCGCTTCGGTCTGGGTCTGGATATCGCCACGTACCACCTCGCC
GGTCGGACTCATCGGCACCTGTCCGGAAAGAAACAGGAAGCCGCCGGCCCGCACCGCGCGGGAAAAGGGAAA
CGGCAGGCTGCTGGGGTAACGCTGGATGTCATCGCTCATCTGGATTGCCTCCTGTGGATGAAGCGCTAG
Translation:
MALSSGQPKPAEARNGPEQPQHLHRHCRDRQLLRGRRAPAPDPTGGEQAHRRPRTAAQCPAVRPGRPRGQPH
RGRPRPAAARLSVAQRARRHPPGAEQPHRRGQRPAGPGHQPPHRPASPAAAAARLHPGASAGGAGYPVPGFG
SGLRGDPSWPCGTGGDHPGPGNRRTGARSPGVGRPAGLRRRPGAPAGPTGHGVPRRRRQAPRGIPRRQHLHP
PHRAAHVRSRRADAEHRHEHQLPGDHQDDGLHRPGLERAAADHARRPGGAPAATGHPAQPPARLHPAHRADP
VERRARLHAPARRTGIRQRHSSGLKRFRSNATGRPSPLRRPRPALTRPACQCPRDSALADPRLHLDLHVDPQ
RQPGGHRRAYRQGPLHMTLVDLVETGEVGHVRQPDGDLHQLVETRATALQGLADACHHRFGLGLDIATYHLA
GRTHRHLSGKKQEAAGPHRAGKGKRQAAGVTLDVIAHLDCLLWMKR*
AnnotationID:6265GeneID:6264
AnnotatorUID: diggins
Modification Date/Time: 2005-04-13 07:07:01
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16064
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29646
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49266How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2890479Stop: 2891915
Length: 1437
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGGCGCTAAGCTCCGGGCAGCCGAAACCAGCGGAGGCCCGCAATGGACCTGAACAGCCTCAACACCTTCAT
CGCCATTGCCGAGACCGGCAGCTTCTCCGAGGCCGGCGAGCGCCTGCACCTGACCCAACCGGCGGTGAGCAA
GCGCATCGCCGCCCTCGAACAGCAGCTCAATGCCCGGCTGTTCGACCGGGTCGGCCGCGAGGTCAACCTCAC
CGAGGCCGGCCGCGCCCTGCTGCCGCGCGCCTATCAGTTGCTCAACGTGCTCGACGACACCCGCCGGGCGCT
GAACAACCTCACCGGCGAGGTCAGCGGCCGGCTGGTCCTGGCCACCAGCCACCACATCGGCCTGCATCGCCT
GCCGCCGCTGCTGCGCGCCTTCACCCGGGCGCATCCGCAGGTGGCGCTGGATATCCAGTTCCTGGATTCGGA
AGTGGCCTACGAGGAGATCCTTCATGGCCGTGCGGAACTGGCGGTGATCACCCTGGCCCCGGAAACCGCCGA
ACCGGTGCGCGCAGTCCCGGTGTGGGACGACCCGCTGGACTTCGTCGCCGCCCCGGAGCACCCGCTGGCCCG
ACAGGGCACGGTGTTCCTCGCCGACGTCGCCAAGCACCCCGCGGTATTCCCCGGCGGCAACACCTTCACCCA
CCACATCGTGCGGCGCATGTTCGAAGCCGAAGGGCTGACGCCGAACATCGCCATGAGCACCAACTACCTGGA
GACCATCAAGATGATGGTCTCCATCGGCCTGGCCTGGAGCGTGCTGCCGCGGACCATGCTCGACGACCAGGT
GGTGCGCCTGCCGCTACAGGACATCCAGCTCAGCCGCCAGCTCGGCTACATCCTGCACACCGAGCGGACCCT
GTCGAACGCCGCGCGCGCCTTCATGCGCCTGCTCGACGAACAGGCATTCGGCAACGGCACTCCAGCGGCCTG
AAGCGATTCAGGTCGAACGCCACGGGTAGGCCCTCCCCTCTTCGCCGTCCGCGGCCAGCGCTCACCCGACCT
GCATGCCAATGCCCTCGCGACTCAGCCCTCGCCGACCCACGCCTGCACCTCGACCTCCACGTCGACCCCCAG
CGCCAGCCCGGCGGTCACCGTCGAGCGTACCGGCAAGGCCCCCTGCACATGACGCTGGTAGACCTCGTTGAA
ACCGGCGAAGTGGGCCATGTCCGACAGCCAGACGGTGACCTTCACCAGTTGGTCGAAACGCGCGCCACAGCT
CTCCAGGGTCTCGCCGATGCGTGCCATCACCGCTTCGGTCTGGGTCTGGATATCGCCACGTACCACCTCGCC
GGTCGGACTCATCGGCACCTGTCCGGAAAGAAACAGGAAGCCGCCGGCCCGCACCGCGCGGGAAAAGGGAAA
CGGCAGGCTGCTGGGGTAACGCTGGATGTCATCGCTCATCTGGATTGCCTCCTGTGGATGAAGCGCTAG