ViewGene

Locus Name:
GeneID:
Location:

GeneID:6260
TrivialName: PA14_23870
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_23870
PAO1 Ortholog Locus:
Sequence Length:1668
Protein Length:555
Start: 2077241
Stop: 2075574
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGGCTGGCTTGGCGGCGGGCTGGCGGCCGGCGCCTGGGTCTGGGCAGGCGGCGGGGTCGCCGGCAGGCC
GCCGATCGGCTGGCTGGGCTGGCCGGCGGCGGCCGGGGAGCCTTCCTCGACGATCTCGGGAGCGATGTCTTC
TTCGCCGGGCTGCAGTTCCGGCACCTCGGTCGGCTGCACCTCGACACTGGGCATGGCCGGCGCTTGCGGGCG
CGGCGGCGCTTCCACCACGACCTGGCGCGACTCGTCTTCGCGGGTGAACAGCATCGGCAGGAAGATCACCGC
CAGGGCGATCAGCACCAACGCCCCGACGATGCGCTGCTTCAGCCCTCTTTCCAGCAAGGCCATGGTTTACTC
CCCCTTATCCGTTCTACGGGCCAGCCACTCCAGGCCTTCGGCCACGCTATAGAACGATCCGAACAGCAGAAT
GACATCATCCGCGGTAGCCTTGGCGCACTGCGCGTCCAGGGCAGCGGCGATATCCGCATGGCTGCTCGCCGG
AACCTGGCGCAGGATCAGCGCCGCCTCCAGCTCCGCGGCCGGCCGCGAACGCGGGGTCGGCAACGGTGCAAC
GGCCCAATCCTGCACCAAGCCGGTCAAGGGTTCCAGTACGCCATCCAGGTCTTTGTCCGCCAGCAGGCCGAA
GACCGCCAGGTAGCGTCCTCGTGGCGCTGCGGCACGCAGGCGTTGCGCCAGGTACTGGGCGGCCTGGGGATT
GTGCCCGACGTCCAGCAGGAGCTGGCGTGGCTGGCCGTCCCAGGACAGGTCGCGGCGATCGAGGCGACCGGT
CACCCGGGTCCGCCGCAGCGCCTCGGCCAGGCGCTCCGCCTGCCAGGGCAACTCGAGCAACGCGTAGGCCTG
CAGGGCCAGCGCGGCGTTTTCCATGGGCAACTCGAGCAACGGCAGATCGTGCAGCGACAGCGCCTGGCCGTC
CGCGGCCAGCCCGCGCCAGTGCCAGCCATAATCGGCGAGCGCCAGGTCGTAGTCGCGACCGCGCAGGTAAAG
CGGTGCCCCCAGCGCAGCCACCTGCTCCAGCAATGGCTGCGGGGGATCGAGATCGCCGCACAGGGCCGGTTT
GCCGGCGCGCAGGATACCGGCTTTCTCGAAAGCCACGCTTTCGCGGGTATCGCCCAGCCACTCGGCATGGTC
CAGGCCGATGCTGGTGATCAGCGCCAGGTCGGCGTCGATCAGGTTGACCGCATCCAGGCGCCCGCCAAGGCC
GACTTCCAGCACCGCGAAGTCCAGCCCGGCGCGCTCGAACAGCCAGAAGGCGGCCAGCGTGCCCATTTCGAA
ATAGGTCAGGGAAATCTCGCCGCGTGCGGCCTCCACCGCGGAGAAGGCGTCGCACAGTTGCGCATCGCCGGC
CTCGATGCCGTCGATCCGCACCCGCTCGTTATAGCGCAGCAGGTGCGGCGAGCTGTAGACCCCGACCGACAA
CCCCTGCTCACGCAGCAGCTCGGCGAGCAGGGCGCAGGTAGAGCCCTTGCCGTTGGTCCCGGTAACGGTGAC
CACGCGTTTCGCCGGCCTTCCCAGGCCGAGCCGGCGCGCTACCTCGCGGGAACGCTCCAGACCCATGTCGAT
GGCCGTCGGATGGAGTTGTTCGAGATAGCTCAGCCAATCGGCCAGGGAACGCTGGGTCATGCGGATACGGGG
CTCGGCGAATGA
Translation:
MRLAWRRAGGRRLGLGRRRGRRQAADRLAGLAGGGRGAFLDDLGSDVFFAGLQFRHLGRLHLDTGHGRRLRA
RRRFHHDLARLVFAGEQHRQEDHRQGDQHQRPDDALLQPSFQQGHGLLPLIRSTGQPLQAFGHAIERSEQQN
DIIRGSLGALRVQGSGDIRMAARRNLAQDQRRLQLRGRPRTRGRQRCNGPILHQAGQGFQYAIQVFVRQQAE
DRQVASSWRCGTQALRQVLGGLGIVPDVQQELAWLAVPGQVAAIEATGHPGPPQRLGQALRLPGQLEQRVGL
QGQRGVFHGQLEQRQIVQRQRLAVRGQPAPVPAIIGERQVVVATAQVKRCPQRSHLLQQWLRGIEIAAQGRF
AGAQDTGFLESHAFAGIAQPLGMVQADAGDQRQVGVDQVDRIQAPAKADFQHREVQPGALEQPEGGQRAHFE
IGQGNLAACGLHRGEGVAQLRIAGLDAVDPHPLVIAQQVRRAVDPDRQPLLTQQLGEQGAGRALAVGPGNGD
HAFRRPSQAEPARYLAGTLQTHVDGRRMELFEIAQPIGQGTLGHADTGLGE*
AnnotationID:6261GeneID:6260
AnnotatorUID: diggins
Modification Date/Time: 2005-04-13 06:06:21
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16057
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29637
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49262How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2876690Stop: 2878357
Length: 1668
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGGCTGGCTTGGCGGCGGGCTGGCGGCCGGCGCCTGGGTCTGGGCAGGCGGCGGGGTCGCCGGCAGGCC
GCCGATCGGCTGGCTGGGCTGGCCGGCGGCGGCCGGGGAGCCTTCCTCGACGATCTCGGGAGCGATGTCTTC
TTCGCCGGGCTGCAGTTCCGGCACCTCGGTCGGCTGCACCTCGACACTGGGCATGGCCGGCGCTTGCGGGCG
CGGCGGCGCTTCCACCACGACCTGGCGCGACTCGTCTTCGCGGGTGAACAGCATCGGCAGGAAGATCACCGC
CAGGGCGATCAGCACCAACGCCCCGACGATGCGCTGCTTCAGCCCTCTTTCCAGCAAGGCCATGGTTTACTC
CCCCTTATCCGTTCTACGGGCCAGCCACTCCAGGCCTTCGGCCACGCTATAGAACGATCCGAACAGCAGAAT
GACATCATCCGCGGTAGCCTTGGCGCACTGCGCGTCCAGGGCAGCGGCGATATCCGCATGGCTGCTCGCCGG
AACCTGGCGCAGGATCAGCGCCGCCTCCAGCTCCGCGGCCGGCCGCGAACGCGGGGTCGGCAACGGTGCAAC
GGCCCAATCCTGCACCAAGCCGGTCAAGGGTTCCAGTACGCCATCCAGGTCTTTGTCCGCCAGCAGGCCGAA
GACCGCCAGGTAGCGTCCTCGTGGCGCTGCGGCACGCAGGCGTTGCGCCAGGTACTGGGCGGCCTGGGGATT
GTGCCCGACGTCCAGCAGGAGCTGGCGTGGCTGGCCGTCCCAGGACAGGTCGCGGCGATCGAGGCGACCGGT
CACCCGGGTCCGCCGCAGCGCCTCGGCCAGGCGCTCCGCCTGCCAGGGCAACTCGAGCAACGCGTAGGCCTG
CAGGGCCAGCGCGGCGTTTTCCATGGGCAACTCGAGCAACGGCAGATCGTGCAGCGACAGCGCCTGGCCGTC
CGCGGCCAGCCCGCGCCAGTGCCAGCCATAATCGGCGAGCGCCAGGTCGTAGTCGCGACCGCGCAGGTAAAG
CGGTGCCCCCAGCGCAGCCACCTGCTCCAGCAATGGCTGCGGGGGATCGAGATCGCCGCACAGGGCCGGTTT
GCCGGCGCGCAGGATACCGGCTTTCTCGAAAGCCACGCTTTCGCGGGTATCGCCCAGCCACTCGGCATGGTC
CAGGCCGATGCTGGTGATCAGCGCCAGGTCGGCGTCGATCAGGTTGACCGCATCCAGGCGCCCGCCAAGGCC
GACTTCCAGCACCGCGAAGTCCAGCCCGGCGCGCTCGAACAGCCAGAAGGCGGCCAGCGTGCCCATTTCGAA
ATAGGTCAGGGAAATCTCGCCGCGTGCGGCCTCCACCGCGGAGAAGGCGTCGCACAGTTGCGCATCGCCGGC
CTCGATGCCGTCGATCCGCACCCGCTCGTTATAGCGCAGCAGGTGCGGCGAGCTGTAGACCCCGACCGACAA
CCCCTGCTCACGCAGCAGCTCGGCGAGCAGGGCGCAGGTAGAGCCCTTGCCGTTGGTCCCGGTAACGGTGAC
CACGCGTTTCGCCGGCCTTCCCAGGCCGAGCCGGCGCGCTACCTCGCGGGAACGCTCCAGACCCATGTCGAT
GGCCGTCGGATGGAGTTGTTCGAGATAGCTCAGCCAATCGGCCAGGGAACGCTGGGTCATGCGGATACGGGG
CTCGGCGAATGA