ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6256

TrivialName: PA14_24000

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_24000

PAO1 Ortholog Locus:

Sequence Length: 1701

Protein Length: 566

Start: 2086583

Stop: 2084883

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAA23411.1| (D86947) hydrophilic protein [Pseudomonas aeruginosa] Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 20/215 (9%)

Sequence:

ATGCCAGGTCGCGCGCGGACAGTCCGCGGGCGAACGTCAGGCGCCCGCCCTGCCCGCTCTGCTCGCGGGTAC
GGGTGGGCTTCACATCGAGCGGCGCCAATTGGCGCTCGCGCAGCAATTGGCGGACCTGGCGCGCGCTGTCCG
CCTCCAGCACGCCCTTCTGCTGGCGACCGCTGGGGTCGAGGGCGAGGTATTCGAAGGCGGCCATTATTCTTC
CCGGGTCACGCGCAGGACTTCCTCGACCGTAGTGACGCCTTCCAGCACCTTGCGCCGACCGTCGTCGCGGAT
GCTTGGTCCGCTGGTGCGGGCATGCCGGGTCATTTCCTGCTCGGAGGATTCGTTGTGGATCAGCGAGCGCAT
GTGGTCGTCGAACACCACCAGTTCATAGATACCGGTACGCCCGCGATAGCCATGCTGGTGGCACTCGCCGCA
GCCGCGGGCGCGATGCAGGGTCGGCGGCGCGGCGGGATCGACGCCGAGCAGCGCGCACTCGGCCTCGTCGGC
GCGGTAGGGCTCCTTGCACGCCGGGCAGAGCACCCGCACCAGGCGCTGGGCCAGCACGCCAAGCATGGAGGA
GGACAGCAGGAACGGCTCGATGCCCATGTCCACCAGGCGGGTGATCGCGCCGATGGCGCTGTTGGTGTGCAG
GGTCGAGAGCACCAGGTGGCCGGTCAGCGAAGCCTGCACCGCGATCTCGGCGGTCTCCCGGTCGCGGATCTC
GCCGACCATCACCACGTCCGGGTCCTGCCGGAGGATCGCCCGCAGGCCGCGGGCGAAGGTCATGTCGACCTT
GGCGTTGACCTGGGTCTGGCCGATGCCCTCCAGGTGGTATTCGATCGGATCCTCGACGGTGAGGATGTTCCG
CGTGCGGTCGTTGAGCGTGGTCAGGCTGGCGTACAGGGTGGTGGTCTTGCCCGAGCCGGTGGGGCCGGTGAC
CAGCAGGATGCCGTGCGGCTTGCGCACCGTTTCGTCCATCAGCTTGCGGTCGCGCTCGCTCATGCCCAGGTG
TTGCAGGTTCAGGCGCCCGGCCTGCTTGTCGAGCAGACGCAGCACCACCCGTTCGCCGTTGGCCGAGGGCAG
GGTCGAGACGCGGATGTCCACCTCGCGCCCGCCGACCCGCAGGGAAATCCGCCCATCCTGGGGAATACGCTT
CTCGGCGATGTCCAGCCGCGCCATGACCTTGATCCGCGATACCAGCAGGGCCGCCAGCTCGCGCTTGGGCTC
CAGCACCTCGCGCAGCACGCCGTCGACGCGGAAGCGCACCACCAGGCGTTTCTCGAAGGTTTCCAGGTGGAT
GTCCGAGGCGTTCTCGCGGATCGCCTCGCCGAGGATCGCGTTGATCAGGCGAATGATCGGCGCGTCGTCCTC
CTGCTCCATCAGGTCCTCGGTTTCCGGGACCTGGTCGGCCAGCGCGGCGAGGTCCAGGCTGCCGCCGAGGTC
CTCGGCGAGCTGCATGGCCGCCGAGGAGTCGTGCTGGTAGGAGGCCGCCAGGGCCTGGTTGAAGGCGTCCTC
GCCGAGCGCCTTGAGCGGCAGGCGGCGGCCGGCGAAGCGCTGCGCCTCGGCGATCGCCGCCAGCTCCACCTG
CGGCCGGCAGGCCAGCCAGTACTGCTCCTCCAGGCACAGGAACAACAGGCCCTGGCGCTTGGCGAAGCTGAA
CGGCAGACGCCGTGGCGGTGCGGCCGGCGCGGCGATGTCGGGTAA

Translation:

MPGRARTVRGRTSGARPARSARGYGWASHRAAPIGARAAIGGPGARCPPPARPSAGDRWGRGRGIRRRPLFF
PGHAQDFLDRSDAFQHLAPTVVADAWSAGAGMPGHFLLGGFVVDQRAHVVVEHHQFIDTGTPAIAMLVALAA
AAGAMQGRRRGGIDAEQRALGLVGAVGLLARRAEHPHQALGQHAKHGGGQQERLDAHVHQAGDRADGAVGVQ
GREHQVAGQRSLHRDLGGLPVADLADHHHVRVLPEDRPQAAGEGHVDLGVDLGLADALQVVFDRILDGEDVP
RAVVERGQAGVQGGGLARAGGAGDQQDAVRLAHRFVHQLAVALAHAQVLQVQAPGLLVEQTQHHPFAVGRGQ
GRDADVHLAPADPQGNPPILGNTLLGDVQPRHDLDPRYQQGRQLALGLQHLAQHAVDAEAHHQAFLEGFQVD
VRGVLADRLAEDRVDQANDRRVVLLLHQVLGFRDLVGQRGEVQAAAEVLGELHGRRGVVLVGGRQGLVEGVL
AERLERQAAAGEALRLGDRRQLHLRPAGQPVLLLQAQEQQALALGEAERQTPWRCGRRGDVG*

AnnotationID:6257 GeneID:6256

AnnotatorUID: diggins

Modification Date/Time: 2005-04-13 06:06:51

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12362

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29629