ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6246

TrivialName: PA14_24470

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_24470

PAO1 Ortholog Locus:

Sequence Length: 2220

Protein Length: 739

Start: 2134930

Stop: 2132712

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: TRUE

Missense Discrepancy: TRUE

Comments:
Homology: gb|AAF10482.1|AE001943_2 (AE001943) conserved hypothetical protein [Deinococcus radiodurans] Identities = 157/576 (27%), Positives = 209/576 (36%), Gaps = 129/576 (22%)

Sequence:

TTGCTTGCCGTCAGTCCGCTCGCATCAGGGGATGCAGACACCGTGCTGGCTGCTCTGCGCCAGGTCCATCAG
CTCGCGGTTGGCCACGGCGTACATGGCGTAGTCGGTACCCGACGCGGCACGCAGTTCGACCAGCATCGCCCG
CCAGCGCTCGACCAGCGGCAGGTGTTGTTCCAGCCACAGGCCGACGCGAGCCTCGACCTCCTTCGGTCCGTC
CTGCATCTGCAACACCGAGACGGTGATCGCCCGCTGCTGCCAGTCGAGGTCGTCGCGGAACGCCTCGCGGGC
CAGCGCCTGCCAGTTGTTCTCCACCGGCAGGTTGGTGATCTGTTGCAGGTACCAGGTAAGGTCCAGCGCGCT
GCCCACGGCGAAATAGGCCTTGGCCACTTCCGCGGTGTCCTGGCCGGTCACGTCGGACGCCTCGATGATCGG
CAGCAGCGTATACAGGTGGCTGGTGCCGGCCACCATGCGTGCCAGCAGTTCCGGTACGCCGGCGTCGACGTA
GGTCTGGTAGCGCGCCTGCCACAGCTCGCGGGTCGGCCCTTCGAGCAGCTCGTTGAGCTTCAGGCCGAGGGC
GGCGATGCGCGGGCCGAAGTGGGCCACGTCGCGCGCCGCGTCCAGCTCGTTGCGGCGGCTGCGGAGGAACCA
GCGGGTGGCGCGGCGACCGAGACGCATCAGTTCGTCCATCAGGGTCAGCTGGATATCAGCGGGCACCTGGTA
GTCGAGGTTCTCGATCTGGCGGAACCAGTGCGGCAGGTGGAACACGTCGCGAACGATCACGTAGGCCCCGGC
GACGTTGGCCGCGCTCATGCCGGTGGACTCCTTCAGGCGCTGCACGAAGGTGATGCCCATGTGGTTGACCAG
GTCGTTGGCGATCTGCGTGCTGACGATCTCGCGCTTCAGGCGATGGCGGCGCATGGCGTCGCCGAACTTCTC
CGCCAGCAATGCCGGGAAGGCGGTCTCCATGTCGCGGGTCAGGTAGTCGTCGTCCGGCACCAGCGATTTCAG
CAGCGATTCCTTGAGGTCGATCTTGCTGTAGGAGATCAGCACCGACAGCTCGGCGCGGGTCAGCCCCTGGCC
GGCACTGATGCGTTCCGCCAGTTCCTCGTCGGAAGGCAGGAACTCCAGGGCGCGATCGAGCTTGCCGCGCGC
CTCGAGGTCGCCCATCAGCCGCTTGTATTCGGCGATCCGCTCGCGGGCGCGGCGTTGCGCCAGGGACAGCGC
CTGGGTCTGCTTGTAGTTGTTGCCCAGCACCAGGGCGCCGACCGCGTCGGTCATCTTCACCAGCAGCGCGTT
GCGCTGCTTCTCGGTCATGTCGCCGGCCTGCACCACTTCGTTGAGCAGGATCTTGATGTTGACCTCATGGTC
GGAGCAGTCCACGCCACCGACGTTGTCGATGAAATCGGTGTTGTTGGCACCGCCGTGCAGGCCGAACTCGAC
CCGCGCCAGTTGGGTCATGCCCAGGTTGCCGCCCTCGCCCACCACCTTCGCGCGCAGCTCGCGGCCGTCGAC
GCGCAGACCGTCGTTGGCCTTGTCGCCGACATCGGCGTGGGTTTCCTTGCTCGACTTCACGTAGGTGCCGAT
ACCGCCGTTCCAGAGCAGGTCGACCGGCGCCTTGAGCAGCGCGTGGATCAGCTCGGTGGGCGCCAGCCTGTC
GGCCTGGATGTCGAAGCGCGCCTGCATTTCCGGGGTGATGGCGATGCTCTTGGCGCTGCGCAGGAAGATCCC
GCCGCCGGCGGAGATCAGCTTGGCGTCGTAGTCGGCCCAGCTCGAACGCGGCAGGTTGAACAGGCGCTGGCG
CTCGACGAAGCTGCTGGCGGCGTCCGGGTTCGGGTCGATGAAGATATGCATGTGGTTGAAGGCGGCCACCAG
TTGCAGCTTGTCCGACATCAGCAGGCCGTTGCCGAACACGTCGCCGGCCATGTCGCCGATGCCGATGACGCT
GATGTTGTCCTTCTGCACGTCGATGCCGCGTTCGCGGAAGTGCCGTTGCACGCTGACCCAGGCGCCCTTGGC
GGTAATCCCCATGCCCTTGTGGTCGTAGCCGGCGGAGCCGCCCCGAGGCGAAGGCGTCGCCGAGCCAGAAAC
CGTACTCGGCGGCGATGCCGTTGGCGATGTCGGAGAAGGTCGCCGTGCCCTTGTCCGCGGCGACCACCAGGT
AGGGATCGTCCTCGTCGTGGCGGACCACGTTGGCCGGCGGCACCACTTCGCCTTCCTTGA

Translation:

MLAVSPLASGDADTVLAALRQVHQLAVGHGVHGVVGTRRGTQFDQHRPPALDQRQVLFQPQADASLDLLRSV
LHLQHRDGDRPLLPVEVVAERLAGQRLPVVLHRQVGDLLQVPGKVQRAAHGEIGLGHFRGVLAGHVGRLDDR
QQRIQVAGAGHHACQQFRYAGVDVGLVARLPQLAGRPFEQLVELQAEGGDARAEVGHVARRVQLVAAAAEEP
AGGAATETHQFVHQGQLDISGHLVVEVLDLAEPVRQVEHVANDHVGPGDVGRAHAGGLLQALHEGDAHVVDQ
VVGDLRADDLALQAMAAHGVAELLRQQCREGGLHVAGQVVVVRHQRFQQRFLEVDLAVGDQHRQLGAGQPLA
GTDAFRQFLVGRQELQGAIELAARLEVAHQPLVFGDPLAGAALRQGQRLGLLVVVAQHQGADRVGHLHQQRV
ALLLGHVAGLHHFVEQDLDVDLMVGAVHATDVVDEIGVVGTAVQAELDPRQLGHAQVAALAHHLRAQLAAVD
AQTVVGLVADIGVGFLARLHVGADTAVPEQVDRRLEQRVDQLGGRQPVGLDVEARLHFRGDGDALGAAQEDP
AAGGDQLGVVVGPARTRQVEQALALDEAAGGVRVRVDEDMHVVEGGHQLQLVRHQQAVAEHVAGHVADADDA
DVVLLHVDAAFAEVPLHADPGALGGNPHALVVVAGGAAPRRRRRRARNRTRRRCRWRCRRRSPCPCPRRPPG
RDRPRRGGPRWPAAPLRLP*

AnnotationID:6247 GeneID:6246

AnnotatorUID: diggins

Modification Date/Time: 2005-04-12 09:09:42

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:16050

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29608