ViewGene

Locus Name:
GeneID:
Location:

GeneID:6244
TrivialName: PA14_24540
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_24540
PAO1 Ortholog Locus:
Sequence Length:1614
Protein Length:537
Start: 2146294
Stop: 2144681
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG08937.1|AE004967_8 (AE004967) glucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase [Pseudomonas aeruginosa PAO1]
Identities = 82/335 (24%), Positives = 120/335 (35%), Gaps = 55/335 (16%)
Sequence:
ATGTCATGCAATCTCCGTGGCTTCGCGGTACAGCCCGCGGTAACGTCCGAGCATCAGCGCCTCGGTGTAGTA
GCGTTCGACCCGTTGCAGGCCGACCGCCTGGGCCGCCTGCCAGCGCTGCGGATTGCGCAGCAGGGCGAGGAT
CGCCCGCGAAGTGGCCTGCGGGTCGGCGATCGCCACCACCTCCCCGGCGCGGCCCAGGGCGCGATCTTCGGC
GTCGGCGCCTTCGATCAGTTCGCGGCAGGAGCCGACGTCGCTGCTCACCACCGGGGCGCCGGCAGCCCAGGC
TTCGAGGATCACCAGCGGCTGCGCTTCGCTGATCGAGGTGAGGACCATCAGGCCGAGTTGCGGCAGGACCTC
GCCGATCCGACGGAAACCGAGGAACTTCACCTTGTCCTGCAGGCCGAGGCTGGCCACCAGGCTGCGGCATTC
GCTGGCATAGTCCGGGTCTTCCTCCTCCGGACCGACGATCCAGCCCTCCGCCTCCGGCATCGCGCTGACCAC
CCCGCGCATGGCGCGGATGAAGGTCTTCACGTCCTTGATCGGCACTACCCGGCCGACCAGCCCGACCACCGG
CGGAATCCCCGGCGGCCGCCGTTCGAGGGCGCCGGCCCAGGCATCGAGGTCGATGCCGTTGGGGATCACCCG
GGTGCGCCGTGGCTCGGCGCCATCGAGTACCTGGCGCTGGCGGTTGCCTTCGTAGAGGGCGACGATCGGATT
GGCGGCGCGATAGGTGAGCAGGCCGACACGCTCGAAGAAGCGGATCCACAAGCGACGGATGTAGCTGACCTC
GGCATCCAGTCCGGTACTCAGCTGCTCGTCGGGGTTCTCCGCGATCCAGTTGGCCTGGGCCAGGTCGATCTT
GCGCTCCTTGGTGTAGATGCCGTGCTCGCTGAGCAGGTAGCGGCAGCCCCAGCGACGTTGCAGGATGCAGCC
CAGCAGGCCGGCGTAGCCGGTGGAGATCGAGTGCAGCATGCGCGCCCGCGGCATCCGCCGGGCCGCCTCGGC
GAGCATGAACACCGGCGCCTGCATCGAGCGCAGGGTCCAGAAGTAATTGACGAAGGACGGATCGGTGCAATA
GCGCTCGTAGCCTGCGGTGATCGCCTCCCAGCTGGCCTTGCTGTGGAGAAAGTCCTCGCGGCCGATGCGGCC
CTCGGCGAGCAGGTCGAGCAGCGCGTCGCCCTCCTCCACGTCCGGCGTCTCCGGGTAGTGGAAGAAACGGTG
CAGATCGCGCAACGCCTTTTCGGTCTCGCTACTGCCCTGTCGCGTCTGCGGGTTCGGCGAACTCCAGGCGGT
TTCCAGGAAGTGTTCCTCGATGTGCAGCACATTGTCCGGGATCGGGTAGTGGCGCTTGCCGTAGGCATCCTT
CTGGCCGCCGATGAAGAACACCGAGAAGGTCAGGTCGGGGAGACCGAGGATCAACTGGTTGACCCAGCTGGA
GACGCCGCCGCGGACATAGGGCCAGGTGCCCTCCAGCAGCAGGCAGACATCGGCGACGGGCGCCGTCGGAGC
GGTGTGTTCGGTCATGTCCAGTATCTCGCCAGGGCCGCGAAGGGCGGCCGTTGCAGCATGTCGTCGGGCATT
CCGGCGAGAAGCCGGGGGATGTCCCGGTAG
Translation:
MSCNLRGFAVQPAVTSEHQRLGVVAFDPLQADRLGRLPALRIAQQGEDRPRSGLRVGDRHHLPGAAQGAIFG
VGAFDQFAAGADVAAHHRGAGSPGFEDHQRLRFADRGEDHQAELRQDLADPTETEELHLVLQAEAGHQAAAF
AGIVRVFLLRTDDPALRLRHRADHPAHGADEGLHVLDRHYPADQPDHRRNPRRPPFEGAGPGIEVDAVGDHP
GAPWLGAIEYLALAVAFVEGDDRIGGAIGEQADTLEEADPQATDVADLGIQSGTQLLVGVLRDPVGLGQVDL
ALLGVDAVLAEQVAAAPATLQDAAQQAGVAGGDRVQHARPRHPPGRLGEHEHRRLHRAQGPEVIDEGRIGAI
ALVACGDRLPAGLAVEKVLAADAALGEQVEQRVALLHVRRLRVVEETVQIAQRLFGLATALSRLRVRRTPGG
FQEVFLDVQHIVRDRVVALAVGILLAADEEHREGQVGETEDQLVDPAGDAAADIGPGALQQQADIGDGRRRS
GVFGHVQYLARAAKGGRCSMSSGIPARSRGMSR*
AnnotationID:6245GeneID:6244
AnnotatorUID: diggins
Modification Date/Time: 2005-04-12 09:09:17
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits at any threshold.
Genomic Context:
Comment:
ReferenceID:12340
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29604
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49246How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2807635Stop: 2809248
Length: 1614
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGTCATGCAATCTCCGTGGCTTCGCGGTACAGCCCGCGGTAACGTCCGAGCATCAGCGCCTCGGTGTAGTA
GCGTTCGACCCGTTGCAGGCCGACCGCCTGGGCCGCCTGCCAGCGCTGCGGATTGCGCAGCAGGGCGAGGAT
CGCCCGCGAAGTGGCCTGCGGGTCGGCGATCGCCACCACCTCCCCGGCGCGGCCCAGGGCGCGATCTTCGGC
GTCGGCGCCTTCGATCAGTTCGCGGCAGGAGCCGACGTCGCTGCTCACCACCGGGGCGCCGGCAGCCCAGGC
TTCGAGGATCACCAGCGGCTGCGCTTCGCTGATCGAGGTGAGGACCATCAGGCCGAGTTGCGGCAGGACCTC
GCCGATCCGACGGAAACCGAGGAACTTCACCTTGTCCTGCAGGCCGAGGCTGGCCACCAGGCTGCGGCATTC
GCTGGCATAGTCCGGGTCTTCCTCCTCCGGACCGACGATCCAGCCCTCCGCCTCCGGCATCGCGCTGACCAC
CCCGCGCATGGCGCGGATGAAGGTCTTCACGTCCTTGATCGGCACTACCCGGCCGACCAGCCCGACCACCGG
CGGAATCCCCGGCGGCCGCCGTTCGAGGGCGCCGGCCCAGGCATCGAGGTCGATGCCGTTGGGGATCACCCG
GGTGCGCCGTGGCTCGGCGCCATCGAGTACCTGGCGCTGGCGGTTGCCTTCGTAGAGGGCGACGATCGGATT
GGCGGCGCGATAGGTGAGCAGGCCGACACGCTCGAAGAAGCGGATCCACAAGCGACGGATGTAGCTGACCTC
GGCATCCAGTCCGGTACTCAGCTGCTCGTCGGGGTTCTCCGCGATCCAGTTGGCCTGGGCCAGGTCGATCTT
GCGCTCCTTGGTGTAGATGCCGTGCTCGCTGAGCAGGTAGCGGCAGCCCCAGCGACGTTGCAGGATGCAGCC
CAGCAGGCCGGCGTAGCCGGTGGAGATCGAGTGCAGCATGCGCGCCCGCGGCATCCGCCGGGCCGCCTCGGC
GAGCATGAACACCGGCGCCTGCATCGAGCGCAGGGTCCAGAAGTAATTGACGAAGGACGGATCGGTGCAATA
GCGCTCGTAGCCTGCGGTGATCGCCTCCCAGCTGGCCTTGCTGTGGAGAAAGTCCTCGCGGCCGATGCGGCC
CTCGGCGAGCAGGTCGAGCAGCGCGTCGCCCTCCTCCACGTCCGGCGTCTCCGGGTAGTGGAAGAAACGGTG
CAGATCGCGCAACGCCTTTTCGGTCTCGCTACTGCCCTGTCGCGTCTGCGGGTTCGGCGAACTCCAGGCGGT
TTCCAGGAAGTGTTCCTCGATGTGCAGCACATTGTCCGGGATCGGGTAGTGGCGCTTGCCGTAGGCATCCTT
CTGGCCGCCGATGAAGAACACCGAGAAGGTCAGGTCGGGGAGACCGAGGATCAACTGGTTGACCCAGCTGGA
GACGCCGCCGCGGACATAGGGCCAGGTGCCCTCCAGCAGCAGGCAGACATCGGCGACGGGCGCCGTCGGAGC
GGTGTGTTCGGTCATGTCCAGTATCTCGCCAGGGCCGCGAAGGGCGGCCGTTGCAGCATGTCGTCGGGCATT
CCGGCGAGAAGCCGGGGGATGTCCCGGTAG