ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6241

TrivialName: PA14_24670

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_24670

PAO1 Ortholog Locus:

Sequence Length: 1695

Protein Length: 564

Start: 2157604

Stop: 2155911

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: TRUE

Missense Discrepancy: TRUE

Comments:
Homology: emb|CAE38371.1| (BX640432) putative GTP-binding protein [Bordetella parapertussis] Identities = 101/353 (28%), Positives = 145/353 (41%), Gaps = 40/353 (11%)

Sequence:

ATGCCGCTCGCCTCAGCGAACGGTGATTCTCCAGGCCCGATGGATCTTCGGATTACGCGCGAAATCCGGATC
GAGGGTTTCGCCAGTGATCTCTTCGACCGCATAGCGGGCCTGCACGCTCTCGTCCAGTTCGAACTTGCGGAA
GTTGTTGGAGAAATACAGCACCCCGCCCGGCGCCAGCCGCGCCATGGCCAGGTCGAGCAGTTCGACGTGGTC
GCGCTGCACGTCGAACACGCCTTCCATACGCTTGGAGTTGGAGAAGGTCGGCGGGTCGATGAAGATCAGTTC
GTACTGGCCATCGTCTTCCCGCAACCACTCCATCACGTCGCCGTGCACCAGGCGCTGCTTGTCGGAAAAGCC
GTTGAGCGACAGGTTGCGCCGCGCCCAGTCCAGGTAGGTCTTCGACAGGTCGACGCTGGTGGTGCTGCGCGC
GCCGCCCCTGGCCGCATGCACGGTGGCCGTGGCGGTATAGCAGAACAGGTTGAGGAAGCGCTTGCCGGCCGC
CTCCTTCTGGATGCGCAGGCGCATCGGCCGGTGATCGAGGAACAGCCCGGTATCCAGGTAATCGGTCAGGTT
CACCAGCAGGCGCACATCGCCCTCGCCCACCTCGAGGAACTTGCCCTCGCTGCTCTGCCGTTCGTACTGCTT
CTTGCCGGCCTGGCGCTCGCGGCGCTTGACCACCACCCGCTCCTGGGCAACGCCCAGGGTCTGCGGAATCGC
CGCCAGGGCGTCGAACAGGCGCGCCTGGGCTTTTGCCGGATCGATCGACTTGGGCGCGGCGTACTCCTGGAC
GTGAACCCAATCGCCGTAGATATCCACCGCCAGGGCATACTCCGGCATATCGGCGTCATACAGGCGATAGCA
CTCGATCTTGTCGCGGCGCGCCCATTTGCCCAGTTGCCGGAGGTTCTTCTGCAGGCGATTGGCGAACATCTG
CCCGCCCTCGCTCAGCCGTGCCGGCTCGCTCGGCGCCCGCGCCAGACCTTCGTCGTTGCGTTCGCCACGCTC
GCCGGTGACGAACTGGCGCGGCTCGACCTGGATCATCAGCAGCTTGCAGGCCAGCGCGCCGTTCCAGAACGC
GTATTGCTTATGGCTGCGGATACCCATGCGCTTGCCCAGTTCCGGCGCCCCGGTGAACACCCCGGCGCTCCA
GCCGATGCAGCTCTGGCGCAGGCGCTCGCCGAGGTTCTGGTAGAGATACAGCAGGCTGGCTTCGTCGCCGAG
GCGCTCGCCATAGGGCGGGTTGCAGATCACCAGGCCGGTCTGGCCCTTGTCCGGGCGCGGCTCGAAAGTCGC
CAGTTCGCCCTGGTAGATCTTCACCCAGTCGGCCACTCCGGCACGCTCGATATTGTTGCGCGCCGGCTGGAT
CAGGCGCGGGTCGGCCTCGTAGCCgcgaatCCAcaacggccgGcCTGGCCAGGCcgGCCgcCGCGCGCTGCT
GGgCttcctcgtggagctggcgccACAGCGCCGGCacgtgCCCCAGCCAATttgCtgaaGCCCCAGCGCTCG
CGcctgaGGTTCGGCGCGatatggGCAGCCATCAGCGCCGCCTCGACCAGGAAGGTGCCGACGCCACACATC
GGGTCGGCCAGGGCACCGCCCTCGGCGGCGATCTTCGGCCAGCCGGCACGGATCAACACCGCCGCCGCCAGG
TTCTCCTTCAGCGGCGCGGCGCCCTGCTGCAGACGATAG

Translation:

MPLASANGDSPGPMDLRITREIRIEGFASDLFDRIAGLHALVQFELAEVVGEIQHPARRQPRHGQVEQFDVV
ALHVEHAFHTLGVGEGRRVDEDQFVLAIVFPQPLHHVAVHQALLVGKAVERQVAPRPVQVGLRQVDAGGAAR
AAPGRMHGGRGGIAEQVEEALAGRLLLDAQAHRPVIEEQPGIQVIGQVHQQAHIALAHLEELALAALPFVLL
LAGLALAALDHHPLLGNAQGLRNRRQGVEQARLGFCRIDRLGRGVLLDVNPIAVDIHRQGILRHIGVIQAIA
LDLVAARPFAQLPEVLLQAIGEHLPALAQPCRLARRPRQTFVVAFATLAGDELARLDLDHQQLAGQRAVPER
VLLMAADTHALAQFRRPGEHPGAPADAALAQALAEVLVEIQQAGFVAEALAIGRVADHQAGLALVRARLESR
QFALVDLHPVGHSGTLDIVARRLDQARVGLVAANPQRPAWPGRPPRAAGLPRGAGATAPARAPANLLKPQRS
RLRFGAIWAAISAASTRKVPTPHIGSARAPPSAAIFGQPARINTAAARFSFSGAAPCCRR*

AnnotationID:6242 GeneID:6241

AnnotatorUID: diggins

Modification Date/Time: 2005-04-12 07:07:12

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12334

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29599