ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6240

TrivialName: PA14_24750

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:56

LocusName: PA14_24750

PAO1 Ortholog Locus:

Sequence Length: 1446

Protein Length: 481

Start: 2164511

Stop: 2165956

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAM38166.1| (AE011978) acidic amino acid rich protein [Xanthomonas axonopodis pv. citri str. 306] Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 9/119 (7%)

Sequence:

GTGCGCAGGCCGAGCAACAGCGGGGCCAGGGCGACGCCCAGGCGCAGCAGACGCTGCCAGCGTCCGCCCTTG
CCAAGCAGTACGCCCAGCAGTGCGGCTCCGCCGGCGCCCCAGAGCGCCGCATTGCCACCGCCGAACAGTTGC
TGGCTGAGGTTGTGGCCCAGCCCCTGGGCCTGGCGGAAGGGTTGCACCAGCAGTTGGCTTTCGCGGCGCAAT
TGCTGGCGCTGCATTTCCAGGCGCAGGCGGATCACCGCCTTGCGCAATTCGCGACGCGACAGGCCGGTCGCG
TTCACCGGTAGTTGGCTCATGCGCGTTTCCTTGTCATGGCAGCAGTCGCTCGCGGTCGTTGGCCAGTTCTTC
CAGGGTGGCGCTGAACGGCGAGCTTTCGTCGTTGATCGACTGGTACAGGCGCCAGCCGCAGAACAGCGAGCC
GATCACGTAGAACAGGCACAACCCGAGCGCCGCTGCGAGCCGGTTGGTGTCCCAGAACACGATCAGCACCAG
CAGCGACAGGCCGACCAGCAGGAGCAGGGCGAATACCAGGGCCAGCCCGGCGAACAGCAGCAGGCGCAGGGT
GTTGGCCTTCTGTTCCTGCAGCTCGATGCCGAACAGCTCGACGTGACCGTGCAACAGGCCGAGGAAGGCGGC
GCCGAAGCGCCGCAGGGAGGGGCGGCCGTCCGCCGGGTCCTTTCCTTCGCTCATGGCTCAGCGCCGGCTGAC
CAACAGGCCAAGCAGGAAGCCGACGCCGGCGGCGATGCCGATGCTCTGCCAGGGGTGTTCGCCGACGTACAC
CTCGGTGGCGTCCACCGCGGCCTGGCTGCGTTCGCGGACGTTGTCCTTCAGCGAGTCCTTGGTGTCGCGCAA
GGTGTCGCGAGCGCGCTTGAGGCTGTCGTGGATCTTGCCGCGGATTTCTTCCGCCTGGTCGCCCGCCACGTC
GGCGGTGCTTTGCAGGAGTTTCTCGGTATCGGCGACCAGTGCCTGGAATTCAGCCAACAGTTCATCCTTTGC
AGCGTTTGCAGTGGTCTTGCGGGGCATGACGAGCTCCTCTGGTCATGGGGTGTGTTTTTTTCGAGCCGAGCG
CGGGGCGGAAGGTTCAACCGATGGGTAATTTCCGCGCGTTGCCGGTCGCTCCCGGCGCTCCTTTCATTAAAG
ACTGCCACAGCGTGCCTGTCGGCGCGGCTGCGGCGAGATGACGCCCATCCGGCTGCTTCGCAACGGGGCGCG
AACTGGTATGGCGCTTGCAATTCCCTGGTGCGCACGTCGGCCGGAATGCCCCTTGCGAGGGCGCCAGGCGCT
CCCGGAGGGTACTTCGGGATGAACGTCCAACCCAATGAAAATCAAGGAAAGTCCGAGAGCTTTCCATGCTGC
CTCAGGCACCTTGCGAAACATCTGCCGAAGAAAAGCAGCGGTTCGCACGACGACTACTGCTTCGTCATGGTG
CGTTGA

Translation:

MRRPSNSGARATPRRSRRCQRPPLPSSTPSSAAPPAPQSAALPPPNSCWLRLWPSPWAWRKGCTSSWLSRRN
CWRCISRRRRITALRNSRRDRPVAFTGSWLMRVSLSWQQSLAVVGQFFQGGAERRAFVVDRLVQAPAAEQRA
DHVEQAQPERRCEPVGVPEHDQHQQRQADQQEQGEYQGQPGEQQQAQGVGLLFLQLDAEQLDVTVQQAEEGG
AEAPQGGAAVRRVLSFAHGSAPADQQAKQEADAGGDADALPGVFADVHLGGVHRGLAAFADVVLQRVLGVAQ
GVASALEAVVDLAADFFRLVARHVGGALQEFLGIGDQCLEFSQQFILCSVCSGLAGHDELLWSWGVFFSSRA
RGGRFNRWVISARCRSLPALLSLKTATACLSARLRRDDAHPAASQRGANWYGACNSLVRTSAGMPLARAPGA
PGGYFGMNVQPNENQGKSESFPCCLRHLAKHLPKKSSGSHDDYCFVMVR*

AnnotationID:6241 GeneID:6240

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:09

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16044

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29597