ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6235

TrivialName: PA14_25070

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_25070

PAO1 Ortholog Locus:

Sequence Length: 3513

Protein Length: 1170

Start: 2196178

Stop: 2192666

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG30261.1|AF307334_7 (AF307334) unknown [Ectothiorhodospira shaposhnikovii] Identities = 91/286 (31%), Positives = 124/286 (43%), Gaps = 27/286 (9%)

Sequence:

ATGCAGCCGGAAACGACTGACACTGAAAAACGAAAGCCGGGGCACGAGGCCCCGGCTTTCCCCTTCTACGAA
CGCTTAGACGCGCTCGAAGACGGTGGTGATACCCTGTCCCAGGCCCACGCACATGGTGGACACGCCAAGGGT
ACCGCCGTTCTGCTTCATCACGTTCAACAGGGTGCCGGAAATGCGTGCACCGGAGCAACCGAACGGGTGACC
CAGGGCAATGGCGCCGCCGTGGAGGTTGACCTTCTCGTCCATCTTGTCGAGCAGCTTGAGGTCCTTCAGCAC
CGGCAGGGCCTGGGCGGCGAAGGCTTCGTTGAGTTCGACGAAATCGATGTCGGCGATGGTCAGGCCGGCGCG
CTTGAGCGCCTTGTTGGTCGACGGCACCGGGCCGTAGCCCATGATCGCCGGGTCGACACCCGCCACGGCCAT
GGAGCGGATCACCGCCATCGGCTGGATGCCCAGGTCCTGGGCGCGCTGGGCCGACATCACGATCATGCAGGA
GGCACCGTCGGTGATCTGCGAGGAGGTCCCCGCGGTCACGGTGCCGCCTTTCGGATTGAACGCCGGCTTCAA
CTGGGCCAGGGTCTCGACGGTGGTTTCCGGACGAATGGTCTCGTCGAAGTCGAAGACTTTCAGGAAACCGTT
CTCGTCATACCCTTCCATCGGGATGATCTCGTCCTTGAACTTGCCTTCCTGGGTGGCCTTCCAGGCCAGTTG
GTGCGAACGCGCGCCGAACTTGTCCTGCGCCTCACGGCTGATACCGTGCATCTTGCCGAGCATTTCCGCGGT
CAGGCCCATCATGCCCGAGGCCTTGGCGGCGTACAGGGACAGGTGCGGGTTCGGGTCGACGCCATGCATCAT
GCCGACGTGGCCCATGTGCTCCACGCCGCCGATGACGAATACATCGCCATTGCCGGTCTGGATCGCCTGGGC
GGCGGTGTGCAGCGCGCTCATCGACGAACCGCACAGGCGGCTGACGGTCTGCGCGGCGCTGGTGTGCGGGAT
CTGGGTCATCAGCGACGCCATGCGCGCGATGTTCCAGCCCTGTTCCAGGGTCTGGTTGACGCAACCCCAGAT
CACGTCTTCCACTTCGGCCGGGTCGACCTTCGGGTTACGCTCCAGCAGCTTGCTGATCAGGTGCGCCGACAT
GGTCTCGGCGCGAGTGTTGCGGTGCATGCCACCCTTGGAACGACCCATCGGGGTGCGGCCGAAGTCGACAAT
GACGACGTCTCTCGGATTCAGGCTCATAAATTCACTCTCGCTCTAGTCGTTCCGCGATTAACCGAAGAATTT
CTGACCGTTCTTGGCCATTTCACGCAGCTTCGCGGTCGGGTGGTACAGCGCGCCCAGCTCGGCGTACTTGTC
GGCCAGGGCCACGAACTCGGCGACACCGATCGAATCGATGTAGCGCAGAGCACCACCACGGAAGGGCGGGAA
GCCGATGCCGTAGATCAGGCCCATATCGGCCTCGGCAGCGGTCTCGACGATGCCGTCCTCCAGGCAACGCAC
GGTTTCCAGGCACAGCGGGATCATCATGAAGTTGACGATGTCCTCGTCGGTCACTTCGCGCTGCTCGACCAC
GATCGGCTTGAGCACTTCGTAGGCCTGCGGATCGGTGACCTTCTTCGGCTTGCCGCGCTTGTCGGTCTCGTA
GGCGTAGAAGCCCTTGCCGTTCTTCTGGCCCAGGCGGTTGGCCTCGTACATCACGTCGACGGCGGTCTTGCC
CTCGACCGCCATGCGGTCCGGGAAGCCCTCGGCCATGACGTCGCGGCCATGGTGGCCGGTGTCGATGCCGAC
CACGTCGGACAGGTAGGCCGGGCCCATGGGCCAGCCGAACTTCTCCATCACCTTGTCGATGCGCACGAAGTC
GACGCCGAAGCTCAGCAGCTTGGCGAAGCCGCCGAAGTACGGGAACAGCACGCGGTTGACCAGGAAGCCGGG
GCAATCGTTGACCACGATCGGGCTCTTGCCCATCTTCTTGGCGTAGGCGACGGTGGTGGCGATGGCGGTTTC
ACCGGTCTTCTCGCCACGGATCACTTCCACCAGCGGCATCATGTGCACCGGGTTGAAGAAATGCATGCCGCA
GAAGTTTTCCGGACGCTTCAGCGCCTGGGCCAGCAGGCTGATGGAGATGGTCGAGGTGTTGGAGGCGATGAT
CGCGTCTTCCTTCACCGCGCCTTCCACTTCGGCGAGCACGGCTTGCTTGACCTTGGGGTTCTCGACGACGGC
TTCGACGACGATGTCGACGTTGCCGAAGTCGCCATAGGACATGGTCGGACGGATGCCATTGAGCGCCTCGGC
CATCTTCGCCGGGGTCAGGCGACCCTTCTCGACGCGCTTGCCGAGCAGCTTGGCGGCCTCGTTCAGGCCCAT
CTGGATACCCTCTTCGCGGATATCCTTCATCAGGATCGGGGTGCCCTTGAGCGCCGACTGATAGGCGATGCC
GCCGCCCATGATGCCGGCGCCGAGCACGGCGGCCAGTTTCACGTCCTTGGCGACTTCGTCGTATTTCTTGGC
TTTCTTCTTCAGTTCCTGGTCATTCAGGAACAGGCCGATCAGGCTCTGCGCGACCGAGGTCTTGGCCAGCTT
GACGAAGCCGGCGGCTTCGACTTCCAGCGCCTTGTCGCGGCCGAAGTTGGCGGCCTTCTGGATGCTCTTGAT
GGCTTCCACCGGCGCCGGGTAGTTCGGACCGGCCTGGCCGGCGACGAAGCCCTTGGCGGTTTCGAAGGCCAT
CATCTGCTCGATTGCATTCAGCTTCAGCTTTTCCAGCTTCGGCTGGCGCCGTGCCTTGTGGTCCAGCTCGCC
GGCGACGGCGCGCTTGGCCAGGTCGAGGGCAGCGGCCTGCAGTTGCTCGGGAGCGACCACGGCGTCGACGGC
GCCGACCTTCAGGGCGTCCTCGGCCTTGTTTTCCTTGCCCGAGGCGATCCACTCGACGGCGTTATCGCAGCC
GATCAGGCGCGGCAGGCGGACGGTGCCGCCGAAGCCCGGGTAGATGCCCAGCTTGACTTCCGGCAGGCCGAC
CTTGGCGGTCGCGCTCATCACGCGGAAGTCCGCGGCCAGGCACATCTCCAGGCCGCCGCCGAGGGCGATGCC
GTTGATCGCGGCAACGGTGGGTACGTCCAGGTCTTCGAAGTCGCTGAAGATCTTGTTGGCTTCGAGGTTGCC
CGCCATCAGTTCCTCGTCGGGCAGCTGGAAGTTGTCAACGAACTCGGTGATGTCGGCACCAACGATGAACAC
GTCCTTTCCGCTGGTCACGATCACGCCCTTGACCGATGCATCGGCCTTGATCGCATCGACTGCCGCACGCAA
CTCACTGAGGGTGAGACGGTTGAACTTGTTGACGGACTCGCCCTTGAGATCGAAATTCAACTCGACGATGCC
GCCCTCAAGAGGCTTAACCGTGATGGCTTTACCTTGGTAAATCATCAACTGATCTCCACGCTATTATGGAAG
CTTGAACTTACACATCGGACGCCGTGTCGGGACCCTTTCGGCAACCGCCGAGCATAG

Translation:

MQPETTDTEKRKPGHEAPAFPFYERLDALEDGGDTLSQAHAHGGHAKGTAVLLHHVQQGAGNACTGATERVT
QGNGAAVEVDLLVHLVEQLEVLQHRQGLGGEGFVEFDEIDVGDGQAGALERLVGRRHRAVAHDRRVDTRHGH
GADHRHRLDAQVLGALGRHHDHAGGTVGDLRGGPRGHGAAFRIERRLQLGQGLDGGFRTNGLVEVEDFQETV
LVIPFHRDDLVLELAFLGGLPGQLVRTRAELVLRLTADTVHLAEHFRGQAHHARGLGGVQGQVRVRVDAMHH
ADVAHVLHAADDEYIAIAGLDRLGGGVQRAHRRTAQAADGLRGAGVRDLGHQRRHARDVPALFQGLVDATPD
HVFHFGRVDLRVTLQQLADQVRRHGLGASVAVHATLGTTHRGAAEVDNDDVSRIQAHKFTLALVVPRLTEEF
LTVLGHFTQLRGRVVQRAQLGVLVGQGHELGDTDRIDVAQSTTTEGREADAVDQAHIGLGSGLDDAVLQATH
GFQAQRDHHEVDDVLVGHFALLDHDRLEHFVGLRIGDLLRLAALVGLVGVEALAVLLAQAVGLVHHVDGGLA
LDRHAVREALGHDVAAMVAGVDADHVGQVGRAHGPAELLHHLVDAHEVDAEAQQLGEAAEVREQHAVDQEAG
AIVDHDRALAHLLGVGDGGGDGGFTGLLATDHFHQRHHVHRVEEMHAAEVFRTLQRLGQQADGDGRGVGGDD
RVFLHRAFHFGEHGLLDLGVLDDGFDDDVDVAEVAIGHGRTDAIERLGHLRRGQATLLDALAEQLGGLVQAH
LDTLFADILHQDRGALERRLIGDAAAHDAGAEHGGQFHVLGDFVVFLGFLLQFLVIQEQADQALRDRGLGQL
DEAGGFDFQRLVAAEVGGLLDALDGFHRRRVVRTGLAGDEALGGFEGHHLLDCIQLQLFQLRLAPCLVVQLA
GDGALGQVEGSGLQLLGSDHGVDGADLQGVLGLVFLARGDPLDGVIAADQARQADGAAEARVDAQLDFRQAD
LGGRAHHAEVRGQAHLQAAAEGDAVDRGNGGYVQVFEVAEDLVGFEVARHQFLVGQLEVVNELGDVGTNDEH
VLSAGHDHALDRCIGLDRIDCRTQLTEGETVELVDGLALEIEIQLDDAALKRLNRDGFTLVNHQLISTLLWK
LELTHRTPCRDPFGNRRA*

AnnotationID:6236 GeneID:6235

AnnotatorUID: diggins

Modification Date/Time: 2005-04-11 18:06:36

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12322

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29588