ViewGene
Locus Name:
GeneID:
Location:

GeneID:6207
TrivialName: PA14_26320
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_26320
PAO1 Ortholog Locus:
Sequence Length:828
Protein Length:275
Start: 2296823
Stop: 2295996
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCTCTGGTCGGCGAAGCCGAGGGCGCTGGCGAGGTCCGCCGGTTGCCCGCCGACAGCGAGCATCTGCCG
CGCCTTGGCCAGCCGCAACTGGACCAGGTAGGCGTAGGGTGGCAAGCCGTAGGCGGCCTTGAATGCACGGTT
CAGGCGGAAGCGGTCGGTGCCGCAGGCGCTGGCCAGCTCGTCCAGGCCGATGTCCTGGTAGAAGTGCGCATG
CAGGTAGTCGCGGGCTTTCTGCGCCACCAGCGGCAGGCGTGGATCGAATGGCTTCGCCTCGCGCCAGCCGAG
GTGCACGCGCAGCCGCTCCAGCACCAGCTCCAGGGCGGTCTGCCGCAGCAGTCGCAGCTCGCGGCCATGCAG
GACGCGGAAGGCCTGGGCGATGGCCAGGGTCAGGCGCGGGTCTTCGGTGAGGTTGGCGTGGAAGCCGGGGTC
GCGGTCGCTGGGCGCATCGTCGAAGGTCGCCCGCAGTTCGCGCCGCAGCCAGTCCGGCTGCAGGTACAGCAT
CGAGTAGGTGAAGCCGCCGGCGATCGGCGCGCGACCGTCGTGGATCTCCCCCGGTTCGACCAGGAATACCTG
GCCGGCGGTGCTGTCGTGTCGGCGTCGGCGGCAGTTGAATTGCTGCACGCCGATCTCGGTGTAGCCGATCAG
GTAGCTGTCGTGCCAGTGCGGATCGTAGGCGTGGCCCTCGAAATGGGCGCGCAGGGTCTCGATCCCGGTCTC
GGCGTCGCGGGCCAGGTCGATCCAGTCTCGGCTGCCCATCGTGCGTCAGGTCTTCCCACTCGTTGGTTTCGT
CGCCGCGACTATAACGCGCCCGTCCCGGGGTTCTAG
Translation:
MALVGEAEGAGEVRRLPADSEHLPRLGQPQLDQVGVGWQAVGGLECTVQAEAVGAAGAGQLVQADVLVEVRM
QVVAGFLRHQRQAWIEWLRLAPAEVHAQPLQHQLQGGLPQQSQLAAMQDAEGLGDGQGQARVFGEVGVEAGV
AVAGRIVEGRPQFAPQPVRLQVQHRVGEAAGDRRATVVDLPRFDQEYLAGGAVVSASAAVELLHADLGVADQ
VAVVPVRIVGVALEMGAQGLDPGLGVAGQVDPVSAAHRASGLPTRWFRRRDYNAPVPGF*
AnnotationID:6208GeneID:6207
AnnotatorUID: diggins
Modification Date/Time: 2005-04-08 07:07:28
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hita above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:12267




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29531




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49209How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2657102Stop: 2657929

          
Length: 828


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGCTCTGGTCGGCGAAGCCGAGGGCGCTGGCGAGGTCCGCCGGTTGCCCGCCGACAGCGAGCATCTGCCG 
CGCCTTGGCCAGCCGCAACTGGACCAGGTAGGCGTAGGGTGGCAAGCCGTAGGCGGCCTTGAATGCACGGTT 
CAGGCGGAAGCGGTCGGTGCCGCAGGCGCTGGCCAGCTCGTCCAGGCCGATGTCCTGGTAGAAGTGCGCATG 
CAGGTAGTCGCGGGCTTTCTGCGCCACCAGCGGCAGGCGTGGATCGAATGGCTTCGCCTCGCGCCAGCCGAG 
GTGCACGCGCAGCCGCTCCAGCACCAGCTCCAGGGCGGTCTGCCGCAGCAGTCGCAGCTCGCGGCCATGCAG 
GACGCGGAAGGCCTGGGCGATGGCCAGGGTCAGGCGCGGGTCTTCGGTGAGGTTGGCGTGGAAGCCGGGGTC 
GCGGTCGCTGGGCGCATCGTCGAAGGTCGCCCGCAGTTCGCGCCGCAGCCAGTCCGGCTGCAGGTACAGCAT 
CGAGTAGGTGAAGCCGCCGGCGATCGGCGCGCGACCGTCGTGGATCTCCCCCGGTTCGACCAGGAATACCTG 
GCCGGCGGTGCTGTCGTGTCGGCGTCGGCGGCAGTTGAATTGCTGCACGCCGATCTCGGTGTAGCCGATCAG 
GTAGCTGTCGTGCCAGTGCGGATCGTAGGCGTGGCCCTCGAAATGGGCGCGCAGGGTCTCGATCCCGGTCTC 
GGCGTCGCGGGCCAGGTCGATCCAGTCTCGGCTGCCCATCGTGCGTCAGGTCTTCCCACTCGTTGGTTTCGT 
CGCCGCGACTATAACGCGCCCGTCCCGGGGTTCTAG