ViewGene

Locus Name:
GeneID:
Location:

GeneID:6206
TrivialName: PA14_26370
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_26370
PAO1 Ortholog Locus:
Sequence Length:924
Protein Length:307
Start: 2298724
Stop: 2299647
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAM37943.1| (AE011953) PilL protein [Xanthomonas axonopodis pv. citri str. 306]
Identities = 74/285 (25%), Positives = 112/285 (39%), Gaps = 41/285 (14%)
Sequence:
GTGCGGCAGCATGAGTCCGACGAAGCCGATGGCGCCGCTCACCGAGACCAGCACGCCGGTCAGCAGCGAGCA
GCAGACGAAGACCCACAGGCGTACGCGGCGGGCGTCCAGGCCGAGGGTCACGGCGGTCTGTTCGCCGGCCAT
CAGCGCGTTCAGCGCACGGCCCAGCCCGAGCAGCACCAGCAGGCCGCCGGCCACGCACAGCGCCGGCAGCCA
GATCAGCGACCAGCGCGCCAGGCCGAGGCCGCCGAGCATCCAGAACAGCACCGAGGAGGCGGCGCGGTGGTC
GCCGAGGAACAGCAGCAGGTTGGCCAGCGCCAGGAGCACGAAGGACACCGCGACCCCCGCCAGCAACAGCCG
GTCGCTGCCCAGGCGGCGGCCGCGGCTGGCCACGCCGAGCACCAGCAGCATGCTGCCGAGGGCGCCGAGGAA
GGCCGCCAGCGGCAGGGTCAGCAGGCCGATCACCTCGCCGATGTAGAGCACCACCAGCACCGCGCCGAGGGT
CGCGCCGGAGGTGGCGCCGAGCAGGTGCGGATCGGCCAGCGGATTGCGCGTGACCGCCTGCAGCGCCGCTCC
CACCAGCGCCAGGCCGGCGCCGACGCAGGCACCGAGCAGTACCCGTGGGGCGCGGATCAGCCAGACGATGTG
CTCCTGGCCGGCGCTCCAGGCACCGGGCTCCGCCGCTACGCCGAACAGGCGCTGGAGGACGATGCGGCCGAC
CAGGCCGCTGTCCAGTCGCGCCGGACCGAAGCCGAGGGCGACCACGCAGGACAGGCCGAGCAACAGGACCAG
GCTGCCCAGCAACAGGCAATAGGCGCGAGGGCTGCGGAACAGGGTCATGGACGTGGCGCCCGAGGGTGGAGG
CCGGCGACCAGGGTTTCTATCGCCGCGGCGTTGCCGATGCCTGGCGTGGCCTGGTTATAG
Translation:
MRQHESDEADGAAHRDQHAGQQRAADEDPQAYAAGVQAEGHGGLFAGHQRVQRTAQPEQHQQAAGHAQRRQP
DQRPARQAEAAEHPEQHRGGGAVVAEEQQQVGQRQEHEGHRDPRQQQPVAAQAAAAAGHAEHQQHAAEGAEE
GRQRQGQQADHLADVEHHQHRAEGRAGGGAEQVRIGQRIARDRLQRRSHQRQAGADAGTEQYPWGADQPDDV
LLAGAPGTGLRRYAEQALEDDAADQAAVQSRRTEAEGDHAGQAEQQDQAAQQQAIGARAAEQGHGRGARGWR
PATRVSIAAALPMPGVAWL*
AnnotationID:6207GeneID:6206
AnnotatorUID: diggins
Modification Date/Time: 2004-11-30 21:09:47
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16004
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29529
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49208How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2655201Stop: 2654278
Length: 924
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGGCAGCATGAGTCCGACGAAGCCGATGGCGCCGCTCACCGAGACCAGCACGCCGGTCAGCAGCGAGCA
GCAGACGAAGACCCACAGGCGTACGCGGCGGGCGTCCAGGCCGAGGGTCACGGCGGTCTGTTCGCCGGCCAT
CAGCGCGTTCAGCGCACGGCCCAGCCCGAGCAGCACCAGCAGGCCGCCGGCCACGCACAGCGCCGGCAGCCA
GATCAGCGACCAGCGCGCCAGGCCGAGGCCGCCGAGCATCCAGAACAGCACCGAGGAGGCGGCGCGGTGGTC
GCCGAGGAACAGCAGCAGGTTGGCCAGCGCCAGGAGCACGAAGGACACCGCGACCCCCGCCAGCAACAGCCG
GTCGCTGCCCAGGCGGCGGCCGCGGCTGGCCACGCCGAGCACCAGCAGCATGCTGCCGAGGGCGCCGAGGAA
GGCCGCCAGCGGCAGGGTCAGCAGGCCGATCACCTCGCCGATGTAGAGCACCACCAGCACCGCGCCGAGGGT
CGCGCCGGAGGTGGCGCCGAGCAGGTGCGGATCGGCCAGCGGATTGCGCGTGACCGCCTGCAGCGCCGCTCC
CACCAGCGCCAGGCCGGCGCCGACGCAGGCACCGAGCAGTACCCGTGGGGCGCGGATCAGCCAGACGATGTG
CTCCTGGCCGGCGCTCCAGGCACCGGGCTCCGCCGCTACGCCGAACAGGCGCTGGAGGACGATGCGGCCGAC
CAGGCCGCTGTCCAGTCGCGCCGGACCGAAGCCGAGGGCGACCACGCAGGACAGGCCGAGCAACAGGACCAG
GCTGCCCAGCAACAGGCAATAGGCGCGAGGGCTGCGGAACAGGGTCATGGACGTGGCGCCCGAGGGTGGAGG
CCGGCGACCAGGGTTTCTATCGCCGCGGCGTTGCCGATGCCTGGCGTGGCCTGGTTATAG