ViewGene

Locus Name:
GeneID:
Location:

GeneID:6204
TrivialName: PA14_26410
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_26410
PAO1 Ortholog Locus:
Sequence Length:2166
Protein Length:721
Start: 2301300
Stop: 2303465
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 201/751 (26%), Positives = 273/751 (36%), Gaps = 166/751 (22%)
Sequence:
ATGGCTACTCGCAGGTCCGGTGGTTCAGCAGAGACGATTGCCGCGGTGCCGGCTTCAGAAACTGAAGTCGGC
GGTGACGTTGAACGAGCGCGGCTGGCCCATGATCCATTGCTGGCCGTTGTTGTTGTCAGCCAGGGCGTACTG
GCGGTCGAACAGGTTGTACAGCTCAAGGCCGAGGGTCAGGTCCGGCCGTACCCGCCAGCCCAGGTTGGCGTC
GACCACCGTGTAGCCGGGCAGGCTGGCCTGGTTGGCGGCGTCGGCGTAGCGCCGGTCGACGTAGCGCAGCCC
GGCGCCGACGCGCAGGGTATCGGCGAAGGACTTGTCCAGCCAGAGGTTGGCGGTGCGCCGTGGCACGTTCCT
GGGGCGGTTGCCGTTGCGCGAGTAGGTCTGCTTGTCGATCGTTTCGTCGAAGTCGTCGTATTCGGCACGCAC
CAGCGCGGCGTTCGCCGACAGCCGCCAGTCCTGGGCCAGGTTCAGTTCCAGGCTGGCCTCCAGGCCGTCCGA
ACTCTGCTGGCCGACCTGCTGCGCGTCGTGCGGCGGCAGCGGGTTGGCGCTGAGCAGCTTCTTCTTGACGAT
ATGGTAGGCGGCCAGGGTCCATTCGCCGCGACCGTCCGGGAACAGTTGCTTGAGGCCGACCTCGGTCTGCTT
CGAGTGGGTCAGGTCCATTTGCTGCTGGGCCGCGTTGAGGGTGATCAGGTTGCTCACGCCGTCCTCGCTGGT
GGAGTACTGGCCGTACAGCGACAGTTCCGGGGTCAGCGCGAAGACCAGCCCGGCGCGCCAGTTGCCGCCCTG
CAGGCTGCGGTCGCTGCGGGTGCCGGCGCGCAGGTCGTCGCGGTCGATATGGTTCTGGTCGCGGCGCACCCC
GGTCACCAGCGACAGGCGCTCGTTGAGCTGCAGGCGGTTCTCGGCGAACAGGGCGAAGGTGCGGGTCTGGCT
GCGCGAGTGCGGCCGGTAGGGCGAGCGGCTTTCGAAGTAGCCGGGCGCGGGGTGCCAGGGGTCGATGTAGTC
GCCGCCGACATCGGTATAGGGCGAGTTGTTGGTCAGGCGGAAGCGGATGCGGTTGTACTCGGCGCCGACCAG
GGTGCGGCTGTCGAGGCCGAACAGGGCGTGCTGGAAGGCGAAGGTCTGGCGGTCGCCGATCTGCTCCTGCTC
GTGGCTGATGCGCAGGTAGTCCTTGCGCAACAGCTCTTCGCGCGGGACGTCCCATTCGTAGGTTTCGGCGTT
GCGCCAGTGGCGGCGGGCCTTGATGTAGTACAGCTGGTTGCTCGCGGTGACGCTGTCGGAAAGGCTCCAGTC
GCTGGTCAGGCGGGTCCACTGGTCGTTGTAGCGCTGCACGTCGTTGCGCACGTTGTAGTTCTTCTCGCGCAG
GCGCTTGTGGTACTTGCCGCCGACCAGCGGGGTGCCGAAGTCGTTCATCGGCTCCTGGTCGCCATAGTCGTG
GGCGAGGGTGAAGGCCAGATCGTCGCTGGCCTGCCAGCGCAGCGCCGCGCTGATGCCCAGGTTGCGCGAGTC
GCCACGGTCGATCCAGCCGTGGCTCTGCTGCTGGTTCAGGTTGAGCCGGTAGCTGAGGCTGTCGGTCAGCGA
GCCGCCGCTGTCCAGGGCCAACTGGCGGTTGTCGTAGGAGCCGTAGCCGAGGCGCAGGTGGTTGCGGATCTC
GCCGGCGAAAGGCTTCTTCGGCACCACGTTGATCACCGCGCCGGTGGCGCCTTCGCCGTACAGCACCGAGGC
CGGGCCGCGGATCACGTCGATGCGCTCGACCATCCACGGATCGCTGGGGAAGTTCACCGTGCCCATGCCGGT
GTACAGGCGCGTGCCGTCGAACAGTTGCATCACCGATGCGTGGCCGCTGAAGCCGCGCGCCGAGAGGCCGGT
ACCGCCATCTCCTGGGGTGCCGATGAAGCTGATGCCGGGGCTGCGGGTGACGGCGGCCTGGACGCTGGGGTT
GTTGCGCCGGCGAACTTCCTCGCCGCTGATGCTGCTGGTGCTCGCCGGGGTGTCCAGGGCGCTGAGGCCCAG
GCGCGAACCGGCACTGACCGGCGTGGCGAGATCGATGTGGTCGAGTTCGGCGGGGTCCTGGCGAACGCTGAC
CAACTGGCTGGGCAGGGCGAGGGCGGCTTCCTCGGTTTCGGCGAGGGCGGGCGGTACCAGCAGCAGGCTGGT
GGATAG
Translation:
MATRRSGGSAETIAAVPASETEVGGDVERARLAHDPLLAVVVVSQGVLAVEQVVQLKAEGQVRPYPPAQVGV
DHRVAGQAGLVGGVGVAPVDVAQPGADAQGIGEGLVQPEVGGAPWHVPGAVAVARVGLLVDRFVEVVVFGTH
QRGVRRQPPVLGQVQFQAGLQAVRTLLADLLRVVRRQRVGAEQLLLDDMVGGQGPFAATVREQLLEADLGLL
RVGQVHLLLGRVEGDQVAHAVLAGGVLAVQRQFRGQREDQPGAPVAALQAAVAAGAGAQVVAVDMVLVAAHP
GHQRQALVELQAVLGEQGEGAGLAARVRPVGRAAFEVAGRGVPGVDVVAADIGIGRVVGQAEADAVVLGADQ
GAAVEAEQGVLEGEGLAVADLLLLVADAQVVLAQQLFARDVPFVGFGVAPVAAGLDVVQLVARGDAVGKAPV
AGQAGPLVVVALHVVAHVVVLLAQALVVLAADQRGAEVVHRLLVAIVVGEGEGQIVAGLPAQRRADAQVARV
ATVDPAVALLLVQVEPVAEAVGQRAAAVQGQLAVVVGAVAEAQVVADLAGERLLRHHVDHRAGGAFAVQHRG
RAADHVDALDHPRIAGEVHRAHAGVQARAVEQLHHRCVAAEAARREAGTAISWGADEADAGAAGDGGLDAGV
VAPANFLAADAAGARRGVQGAEAQARTGTDRRGEIDVVEFGGVLANADQLAGQGEGGFLGFGEGGRYQQQAG
G*
AnnotationID:6205GeneID:6204
AnnotatorUID: diggins
Modification Date/Time: 2005-04-08 07:07:36
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12262
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29525
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49206How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2652625Stop: 2650460
Length: 2166
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCTACTCGCAGGTCCGGTGGTTCAGCAGAGACGATTGCCGCGGTGCCGGCTTCAGAAACTGAAGTCGGC
GGTGACGTTGAACGAGCGCGGCTGGCCCATGATCCATTGCTGGCCGTTGTTGTTGTCAGCCAGGGCGTACTG
GCGGTCGAACAGGTTGTACAGCTCAAGGCCGAGGGTCAGGTCCGGCCGTACCCGCCAGCCCAGGTTGGCGTC
GACCACCGTGTAGCCGGGCAGGCTGGCCTGGTTGGCGGCGTCGGCGTAGCGCCGGTCGACGTAGCGCAGCCC
GGCGCCGACGCGCAGGGTATCGGCGAAGGACTTGTCCAGCCAGAGGTTGGCGGTGCGCCGTGGCACGTTCCT
GGGGCGGTTGCCGTTGCGCGAGTAGGTCTGCTTGTCGATCGTTTCGTCGAAGTCGTCGTATTCGGCACGCAC
CAGCGCGGCGTTCGCCGACAGCCGCCAGTCCTGGGCCAGGTTCAGTTCCAGGCTGGCCTCCAGGCCGTCCGA
ACTCTGCTGGCCGACCTGCTGCGCGTCGTGCGGCGGCAGCGGGTTGGCGCTGAGCAGCTTCTTCTTGACGAT
ATGGTAGGCGGCCAGGGTCCATTCGCCGCGACCGTCCGGGAACAGTTGCTTGAGGCCGACCTCGGTCTGCTT
CGAGTGGGTCAGGTCCATTTGCTGCTGGGCCGCGTTGAGGGTGATCAGGTTGCTCACGCCGTCCTCGCTGGT
GGAGTACTGGCCGTACAGCGACAGTTCCGGGGTCAGCGCGAAGACCAGCCCGGCGCGCCAGTTGCCGCCCTG
CAGGCTGCGGTCGCTGCGGGTGCCGGCGCGCAGGTCGTCGCGGTCGATATGGTTCTGGTCGCGGCGCACCCC
GGTCACCAGCGACAGGCGCTCGTTGAGCTGCAGGCGGTTCTCGGCGAACAGGGCGAAGGTGCGGGTCTGGCT
GCGCGAGTGCGGCCGGTAGGGCGAGCGGCTTTCGAAGTAGCCGGGCGCGGGGTGCCAGGGGTCGATGTAGTC
GCCGCCGACATCGGTATAGGGCGAGTTGTTGGTCAGGCGGAAGCGGATGCGGTTGTACTCGGCGCCGACCAG
GGTGCGGCTGTCGAGGCCGAACAGGGCGTGCTGGAAGGCGAAGGTCTGGCGGTCGCCGATCTGCTCCTGCTC
GTGGCTGATGCGCAGGTAGTCCTTGCGCAACAGCTCTTCGCGCGGGACGTCCCATTCGTAGGTTTCGGCGTT
GCGCCAGTGGCGGCGGGCCTTGATGTAGTACAGCTGGTTGCTCGCGGTGACGCTGTCGGAAAGGCTCCAGTC
GCTGGTCAGGCGGGTCCACTGGTCGTTGTAGCGCTGCACGTCGTTGCGCACGTTGTAGTTCTTCTCGCGCAG
GCGCTTGTGGTACTTGCCGCCGACCAGCGGGGTGCCGAAGTCGTTCATCGGCTCCTGGTCGCCATAGTCGTG
GGCGAGGGTGAAGGCCAGATCGTCGCTGGCCTGCCAGCGCAGCGCCGCGCTGATGCCCAGGTTGCGCGAGTC
GCCACGGTCGATCCAGCCGTGGCTCTGCTGCTGGTTCAGGTTGAGCCGGTAGCTGAGGCTGTCGGTCAGCGA
GCCGCCGCTGTCCAGGGCCAACTGGCGGTTGTCGTAGGAGCCGTAGCCGAGGCGCAGGTGGTTGCGGATCTC
GCCGGCGAAAGGCTTCTTCGGCACCACGTTGATCACCGCGCCGGTGGCGCCTTCGCCGTACAGCACCGAGGC
CGGGCCGCGGATCACGTCGATGCGCTCGACCATCCACGGATCGCTGGGGAAGTTCACCGTGCCCATGCCGGT
GTACAGGCGCGTGCCGTCGAACAGTTGCATCACCGATGCGTGGCCGCTGAAGCCGCGCGCCGAGAGGCCGGT
ACCGCCATCTCCTGGGGTGCCGATGAAGCTGATGCCGGGGCTGCGGGTGACGGCGGCCTGGACGCTGGGGTT
GTTGCGCCGGCGAACTTCCTCGCCGCTGATGCTGCTGGTGCTCGCCGGGGTGTCCAGGGCGCTGAGGCCCAG
GCGCGAACCGGCACTGACCGGCGTGGCGAGATCGATGTGGTCGAGTTCGGCGGGGTCCTGGCGAACGCTGAC
CAACTGGCTGGGCAGGGCGAGGGCGGCTTCCTCGGTTTCGGCGAGGGCGGGCGGTACCAGCAGCAGGCTGGT
GGATAG