ViewGene

Locus Name:
GeneID:
Location:

GeneID:6200
TrivialName: PA14_26630
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_26630
PAO1 Ortholog Locus:
Sequence Length:2244
Protein Length:747
Start: 2319783
Stop: 2322026
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAB71604.1| (AF020765) hypothetical protein [Myxococcus xanthus]
Identities = 77/299 (25%), Positives = 113/299 (37%), Gaps = 70/299 (23%)
Sequence:
TTGCCGAACCCAAGCCGCCGGCCAAGCCGAAGCCTGCGGCTACGCCGCCGAAGCCGGCCAGCAGGCCGGTCG
CCAAGGACAAGCCGGCGCCGGCGAAGCGCGCTTCCACTGCCCGTCTCGACCCCGAGGTGCGCAAGCCGCTGC
CGAGCGCCAAGCTGGACCTGCGCCTGCCGAAGGAACTGGTGCAGAAGATGGCGCCGCCCGGCACGGAAGAGA
CCCATAAGCCCAAGCCGCTGTTGCCGCCGATGTTCGAGGAAAAGGACGACAGCGACTTCCGCCTCAACGGCC
AGTTGCTCTATCGCGACCGCGAACTGGGCGTGTCGCGGCCCCTGGAAGGGGCCGAGTTGCAGTTCGAATTCC
GCCAGTAGGCCGCCCCGGCGCTCAGAAGCGGTAGCGCTGCTCCTGCAACGCCTGGTACAGCTCCGCGTCCAG
CGGCTGGTAGCCGGCGCTGCCGGGCAACCTGACGAAGAGTTTGTCGCTCACCCGCGCGGGATCGTAGGCGTC
GCGCTTGAGGTCGGTCTTCTTGTACTTGAAGGTGCCGGTGGTCTCGACTTCGCGCAGCAGGCGCAGGAACAC
CGGCGTGGCATAGGCCGGCAACTCGCGGTCGAGGTGCGCGGCGAGGGCGTCGCGGTCCAGTTCGACGCCATC
GGCCAGGCGCAGTGCGGCCATCCCGCAGCGGCCGTTGGTGCCGGGAATCTCCACGCCGTAGACCACCGCATC
TTCGACCCCGTCGAAGGCGCCGAGAGCGTTTTCCACCTCGGTGGTGGAAACGTTCTCGCCCTTCCAGCGGAA
GGTGTCGCCGAGACGGTCGACGAACTGGGTGTGCTTGAAACCGATGTCGCGCATCAGGTCGCCGGTGTTGAA
CCAGGCGTCGCCCTTCTTGAACACGTCGCGGAGGATCACCGCTTCGCTCTTGGCCGGATCGGTGTAGCCGTC
GAACGGCCACTTCGCGCTGATCTCGCTGATCAGCAGGCCGACCTCGCCCTTGCCGACCTTCTCCATGAAGCC
CTTGGCGTCGCGCACCGGGCGGTCGTTCTCCAGGTCGTAGCGGACGATGGCGTAGGTGGCTGGGGAGAAGCC
CACCGTATTGTCGAAATTGAATACGTTGGTGAAGCCGATGTTGCCTTCGCTGGAAGCGTAGAACTCGGTGAT
CCGCTGGATCTCGAAGCGTTGCTTGAACTCGGCCCAGATCGACGGGCGCAGGCCGTTGCCGATCATGCAGGT
CAGGCTATTGCCGCGTTCCTCGGCGCACGGCGGCTGGTTCAGCAGGTAGCGGCAGAGTTCGCCGATGTAGCC
GAAGCAGGTCGCCCGGTAGTGCTGCACGTCCTTCCAGAAACCGCTGGCGGAGAACTTGCGGCGCAGGGCCAT
GGCCGCGCCGCCGGCGAGCGCCGCGCTCCAGCAGACGGTCACGGCGTTGTTGTGGTAGCAGGGCAGGGTCAG
GTAGAGCACGTCGTCGCGGCCCAGGCCCAGGCCGGAATGGCCGAAGCCGCCGTAGGCCTTGATCCACTTGCC
GTGGCTCATGATCGAGGCTTTCGGCAGGCCGGTGGTGCCGGAGGTGTAGATGTAGAAGCAGGAGTCCTTGAG
CCGCACCCTGCCGGTGTCCTCGAGGTTCTCCGAGGTCTGTCCCTGGGCCAGGCGCATCAGGTTGCGCCAGCC
CATCGGCGGCGAGCCGGGATCGCCGAGGGTGTCGCCGTCGTCGACCCAGTAGCAATGGCCGGCGTTGCCGAG
CACCTCCTGGCGGACTTCCTCGAACACCTCGCGCAACTCTTCGCCGACCACGAAGTGGCCGGGCTTCACCAG
GTTCAGGCTGTGCACCAGGACCTTGCCGCGCTGGGTGGTGTTGACCAGTGCGCCGATGGCGCCGAGCTTGGC
CAGGGCGGCGAGGATCGCCAGCAGCTCGACGCGGTTCTCCAGCATCACCGCGACCACGCTGCCGTGGCCTAC
GCCCTCGGCCTTGAAGGCGCGCGCCAGGCGATTGGCCCAGCCGTTGAACAGGGCGTAGCTGATCCGCCGCTG
GCCGTCGAGCACCGCCGGGTTGTCCGGGTACAGGCGTGCCGCGCGCTCCAGCGCCCAGCCCAGGGACAGGCT
CTTCTCGCGGTTACGGATCGCGGTGTAGTACAGGCCGCGCAGCATGCGCGGCACGCGGCCGAAGGTGGCAGG
CAGGCGGGCAACGAAACGGTTGAAAGTGATCAGGTCGGCGTGGGTCATGGCTCTCGCGCTTTGTCGTTGTTG
TGCGGGGCGTAG
Translation:
MPNPSRRPSRSLRLRRRSRPAGRSPRTSRRRRSALPLPVSTPRCASRCRAPSWTCACRRNWCRRWRRPARKR
PISPSRCCRRCSRKRTTATSASTASCSIATANWACRGPWKGPSCSSNSASRPPRRSEAVALLLQRLVQLRVQ
RLVAGAAGQPDEEFVAHPRGIVGVALEVGLLVLEGAGGLDFAQQAQEHRRGIGRQLAVEVRGEGVAVQFDAI
GQAQCGHPAAAVGAGNLHAVDHRIFDPVEGAESVFHLGGGNVLALPAEGVAETVDELGVLETDVAHQVAGVE
PGVALLEHVAEDHRFALGRIGVAVERPLRADLADQQADLALADLLHEALGVAHRAVVLQVVADDGVGGWGEA
HRIVEIEYVGEADVAFAGSVELGDPLDLEALLELGPDRRAQAVADHAGQAIAAFLGARRLVQQVAAEFADVA
EAGRPVVLHVLPETAGGELAAQGHGRAAGERRAPADGHGVVVVAGQGQVEHVVAAQAQAGMAEAAVGLDPLA
VAHDRGFRQAGGAGGVDVEAGVLEPHPAGVLEVLRGLSLGQAHQVAPAHRRRAGIAEGVAVVDPVAMAGVAE
HLLADFLEHLAQLFADHEVAGLHQVQAVHQDLAALGGVDQCADGAELGQGGEDRQQLDAVLQHHRDHAAVAY
ALGLEGARQAIGPAVEQGVADPPLAVEHRRVVRVQACRALQRPAQGQALLAVTDRGVVQAAQHARHAAEGGR
QAGNETVESDQVGVGHGSRALSLLCGA*
AnnotationID:6201GeneID:6200
AnnotatorUID: diggins
Modification Date/Time: 2005-04-07 11:11:46
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15998
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29517
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49202How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2634143Stop: 2631900
Length: 2244
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCCGAACCCAAGCCGCCGGCCAAGCCGAAGCCTGCGGCTACGCCGCCGAAGCCGGCCAGCAGGCCGGTCG
CCAAGGACAAGCCGGCGCCGGCGAAGCGCGCTTCCACTGCCCGTCTCGACCCCGAGGTGCGCAAGCCGCTGC
CGAGCGCCAAGCTGGACCTGCGCCTGCCGAAGGAACTGGTGCAGAAGATGGCGCCGCCCGGCACGGAAGAGA
CCCATAAGCCCAAGCCGCTGTTGCCGCCGATGTTCGAGGAAAAGGACGACAGCGACTTCCGCCTCAACGGCC
AGTTGCTCTATCGCGACCGCGAACTGGGCGTGTCGCGGCCCCTGGAAGGGGCCGAGTTGCAGTTCGAATTCC
GCCAGTAGGCCGCCCCGGCGCTCAGAAGCGGTAGCGCTGCTCCTGCAACGCCTGGTACAGCTCCGCGTCCAG
CGGCTGGTAGCCGGCGCTGCCGGGCAACCTGACGAAGAGTTTGTCGCTCACCCGCGCGGGATCGTAGGCGTC
GCGCTTGAGGTCGGTCTTCTTGTACTTGAAGGTGCCGGTGGTCTCGACTTCGCGCAGCAGGCGCAGGAACAC
CGGCGTGGCATAGGCCGGCAACTCGCGGTCGAGGTGCGCGGCGAGGGCGTCGCGGTCCAGTTCGACGCCATC
GGCCAGGCGCAGTGCGGCCATCCCGCAGCGGCCGTTGGTGCCGGGAATCTCCACGCCGTAGACCACCGCATC
TTCGACCCCGTCGAAGGCGCCGAGAGCGTTTTCCACCTCGGTGGTGGAAACGTTCTCGCCCTTCCAGCGGAA
GGTGTCGCCGAGACGGTCGACGAACTGGGTGTGCTTGAAACCGATGTCGCGCATCAGGTCGCCGGTGTTGAA
CCAGGCGTCGCCCTTCTTGAACACGTCGCGGAGGATCACCGCTTCGCTCTTGGCCGGATCGGTGTAGCCGTC
GAACGGCCACTTCGCGCTGATCTCGCTGATCAGCAGGCCGACCTCGCCCTTGCCGACCTTCTCCATGAAGCC
CTTGGCGTCGCGCACCGGGCGGTCGTTCTCCAGGTCGTAGCGGACGATGGCGTAGGTGGCTGGGGAGAAGCC
CACCGTATTGTCGAAATTGAATACGTTGGTGAAGCCGATGTTGCCTTCGCTGGAAGCGTAGAACTCGGTGAT
CCGCTGGATCTCGAAGCGTTGCTTGAACTCGGCCCAGATCGACGGGCGCAGGCCGTTGCCGATCATGCAGGT
CAGGCTATTGCCGCGTTCCTCGGCGCACGGCGGCTGGTTCAGCAGGTAGCGGCAGAGTTCGCCGATGTAGCC
GAAGCAGGTCGCCCGGTAGTGCTGCACGTCCTTCCAGAAACCGCTGGCGGAGAACTTGCGGCGCAGGGCCAT
GGCCGCGCCGCCGGCGAGCGCCGCGCTCCAGCAGACGGTCACGGCGTTGTTGTGGTAGCAGGGCAGGGTCAG
GTAGAGCACGTCGTCGCGGCCCAGGCCCAGGCCGGAATGGCCGAAGCCGCCGTAGGCCTTGATCCACTTGCC
GTGGCTCATGATCGAGGCTTTCGGCAGGCCGGTGGTGCCGGAGGTGTAGATGTAGAAGCAGGAGTCCTTGAG
CCGCACCCTGCCGGTGTCCTCGAGGTTCTCCGAGGTCTGTCCCTGGGCCAGGCGCATCAGGTTGCGCCAGCC
CATCGGCGGCGAGCCGGGATCGCCGAGGGTGTCGCCGTCGTCGACCCAGTAGCAATGGCCGGCGTTGCCGAG
CACCTCCTGGCGGACTTCCTCGAACACCTCGCGCAACTCTTCGCCGACCACGAAGTGGCCGGGCTTCACCAG
GTTCAGGCTGTGCACCAGGACCTTGCCGCGCTGGGTGGTGTTGACCAGTGCGCCGATGGCGCCGAGCTTGGC
CAGGGCGGCGAGGATCGCCAGCAGCTCGACGCGGTTCTCCAGCATCACCGCGACCACGCTGCCGTGGCCTAC
GCCCTCGGCCTTGAAGGCGCGCGCCAGGCGATTGGCCCAGCCGTTGAACAGGGCGTAGCTGATCCGCCGCTG
GCCGTCGAGCACCGCCGGGTTGTCCGGGTACAGGCGTGCCGCGCGCTCCAGCGCCCAGCCCAGGGACAGGCT
CTTCTCGCGGTTACGGATCGCGGTGTAGTACAGGCCGCGCAGCATGCGCGGCACGCGGCCGAAGGTGGCAGG
CAGGCGGGCAACGAAACGGTTGAAAGTGATCAGGTCGGCGTGGGTCATGGCTCTCGCGCTTTGTCGTTGTTG
TGCGGGGCGTAG