ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6199

TrivialName: PA14_26660

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_26660

PAO1 Ortholog Locus:

Sequence Length: 2274

Protein Length: 757

Start: 2324622

Stop: 2322349

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC69248.1| (AP005027) putative oxidoreductase [Streptomyces avermitilis MA-4680] Identities = 181/557 (32%), Positives = 198/557 (35%), Gaps = 116/557 (20%)

Sequence:

GTGCATCCCCGGCTACGAAGGCGCCGAACAGGACGACGCGACCCTGCGGCGCGAGGCCGAACGCATCGGCTA
CCCGCTGATGATCAAGGCCAGCGCCGGCGGCGGCGGCCGCGGCATGCGCCTGGTGGAGGAACCCGGCCAACT
GCTGGAACAGTTGCGCACTGCGCGCTCGGAAGCGCTGGGCGCCTTCGGCAGCGCCGAGCTGATCCTGGAGAG
GGCCGTGCTGCGCCCGCGCCATGTGGAGATCCAGGTGTTCGGCGACCGCCACGGCAACCTGCTCTACCTCGG
CGAACGCGACTGCTCGGTGCAGCGCCGCCACCAGAAGGTCATCGAGGAAGCCCCCTGCCCGGTGCTCGATGC
CGACCTGCGTCGCGCCATGGGCGAGGCGGCGGTGAAGGCCGCGGCCTCGGTCAACTACGTGGGCGCCGGCAC
CGTCGAGTTTCTTCTCGGCGAGGATGGTCGCTTCTACTTCCTGGAGATGAATACCCGCCTGCAGGTCGAACA
CCCGGTCACCGAACTGGTCACCGGCCAGGACCTGGTGGCCTGGCAGATCCGCATCGCCGAGGGCCATCCGCT
GCCGCTGCGGCAGGAGCAGGTGGAACTGCGCGGGCATGCCATCGAGGTCCGCCTCTACGCCGAGGACGCCGG
TCGCGGCTTCCTGCCGCAGACCGGCACGGTGCTGCGCTGGGACCCGGAACTGCTGCCCGGCGTACGCATCGA
CCATGGCCTGGTCGAGGGGCAGGCGGTGACGCCCTTCTACGACCCGATGCTGGCCAAGCTGATCGCCTACGG
GGCGACCCGCGACGAAGCCCGGCGCAAGCTGATCCGCGCGCTGGAGCGCTGCGTGCTGCTGGGGGTCGACGG
CAACCAGCGGTTCCTCGCCAACCTCCTGGCGCATCCGGACTTCGCCGCCGGCGAGGCGACCACCGCCTTCAT
CGGCGAACGCTTCGCCGAAGACCCCAGCCTGCAACCGCGCCAGCCGGGCGCCGAGGAACTGGCCCTGGCCGC
CGCCCTGCTCTACCAGGCCGGCGCCGAGGCCAGTGCGCACCAGCCCGGCCTGGCCGGCTGGCGCAGCGCCGC
CGGGGCGCCGTGGAAGATCGTCCTGAAGCACGCCGAACAGCGCCTGGAGATCGGCCTGGAGGTCCTCGAAAG
CGGCCGTCGGCCGCGACTGCTGGCGCGCCTGGAGCGACGCGAGATCGCCGTGCGCCTGCTCGACTGCGACGG
ACGCTGGGCCAGCGTCGAACTCGACGGCATTCGCCGCCGCCACGCCTACCACCTGGACGGCGGGCGCCTCTG
GCTGTACGGCCACGGCGGCAACCTCGAACTGCTCGACGTCACCCACGCCGGCGCCAGCGCCCAGGTCGGCGC
CAGCTCCGGCACGCTCAAGGCGCCGATGGACGGCGCCATCGTCGAGGTGCTGGTCGGCGAGGGCGAACGGGT
CGGCAAGGGCCAACTGCTGCTGGTGCTGGAGGCAATGAAGATGGAACACCCGCTGAAGGCCGGAGTCGACGG
CGTGGTCCGCCGCGTCCAGGTCGGCCGTGGCGAGCAGGTACGCAACCGGCAGGTGCTGGTCGAGGTGGAAGC
CGACGCCTGAGACAACCCGCCGCTCATCCGCAACGACAACGACAAGAAAACGGAGACGCCCATGTCACTGCA
CGGCAAGACCCTGTTCATCACCGGCGCCAGCCGCGGCATCGGCCGGGAGATAGCCCTGCGCGCCGCGCGCGA
TGGCGCCAACCTGGTGATCGCGGCGAAGAGCGCCGAGCCGCATCCGAAGCTGGAAGGCACCATCTTCAGCGT
CGCCGCCGAGGTCGAGGCCGCCGGCGGCCAGGCCCTGCCGCTGCAACTCGACGTGCGCGACGAGCAGGCCGT
GGCGGCGGCCATGGCCCGCGCCGCCGAACGCTTCGGCGGGATCGACGCGCTGGTCAACAATGCCGGGGCGAT
CCGCCTGGTCGGGGTGGAAAAGCTGGAGCCCAAGCGCTTCGACCTGATGTACCAGATCAACACCCGCGCAGT
GCTGGTCTGCAGCCAGGCCGCCCTGCCCTACCTGCGCAGGAGCGCCAACGGCCACATCCTCAGCCTGTCGCC
GCCGATCAACCTGGCCGGCAGGTGGTTCGCCCAGCACGGCCCCTACACGGTCACCAAGTACGGCATGAGCAT
GCTTACCCTGGGGATGCACGAGGAGTTCGGGAAATACGCCATCAGCGTCAACGCGCTGTGGCCGAAGACCAT
GATCGCCACCGCCGCCATCGAGTTCGAGCTGGGCAGCCGTGA

Translation:

MHPRLRRRRTGRRDPAARGRTHRLPADDQGQRRRRRPRHAPGGGTRPTAGTVAHCALGSAGRLRQRRADPGE
GRAAPAPCGDPGVRRPPRQPALPRRTRLLGAAPPPEGHRGSPLPGARCRPASRHGRGGGEGRGLGQLRGRRH
RRVSSRRGWSLLLPGDEYPPAGRTPGHRTGHRPGPGGLADPHRRGPSAAAAAGAGGTARACHRGPPLRRGRR
SRLPAADRHGAALGPGTAARRTHRPWPGRGAGGDALLRPDAGQADRLRGDPRRSPAQADPRAGALRAAGGRR
QPAVPRQPPGASGLRRRRGDHRLHRRTLRRRPQPATAPAGRRGTGPGRRPALPGRRRGQCAPARPGRLAQRR
RGAVEDRPEARRTAPGDRPGGPRKRPSAATAGAPGATRDRRAPARLRRTLGQRRTRRHSPPPRLPPGRRAPL
AVRPRRQPRTARRHPRRRQRPGRRQLRHAQGADGRRHRRGAGRRGRTGRQGPTAAGAGGNEDGTPAEGRSRR
RGPPRPGRPWRAGTQPAGAGRGGSRRLRQPAAHPQRQRQENGDAHVTARQDPVHHRRQPRHRPGDSPARRAR
WRQPGDRGEERRAASEAGRHHLQRRRRGRGRRRPGPAAATRRARRAGRGGGHGPRRRTLRRDRRAGQQCRGD
PPGRGGKAGAQALRPDVPDQHPRSAGLQPGRPALPAQERQRPHPQPVAADQPGRQVVRPARPLHGHQVRHEH
AYPGDARGVREIRHQRQRAVAEDHDRHRRHRVRAGQP*

AnnotationID:6200 GeneID:6199

AnnotatorUID: diggins

Modification Date/Time: 2004-12-01 10:10:21

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15996

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29514

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:36132

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: (text/plain)

Data: 6199_cdd.html

URL:

GC ORFID: `49201`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `2629304`	Stop: `2631577`
Length: `2274`
Start Codon: `GTG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCATCCCCGGCTACGAAGGCGCCGAACAGGACGACGCGACCCTGCGGCGCGAGGCCGAACGCATCGGCTA CCCGCTGATGATCAAGGCCAGCGCCGGCGGCGGCGGCCGCGGCATGCGCCTGGTGGAGGAACCCGGCCAACT GCTGGAACAGTTGCGCACTGCGCGCTCGGAAGCGCTGGGCGCCTTCGGCAGCGCCGAGCTGATCCTGGAGAG GGCCGTGCTGCGCCCGCGCCATGTGGAGATCCAGGTGTTCGGCGACCGCCACGGCAACCTGCTCTACCTCGG CGAACGCGACTGCTCGGTGCAGCGCCGCCACCAGAAGGTCATCGAGGAAGCCCCCTGCCCGGTGCTCGATGC CGACCTGCGTCGCGCCATGGGCGAGGCGGCGGTGAAGGCCGCGGCCTCGGTCAACTACGTGGGCGCCGGCAC CGTCGAGTTTCTTCTCGGCGAGGATGGTCGCTTCTACTTCCTGGAGATGAATACCCGCCTGCAGGTCGAACA CCCGGTCACCGAACTGGTCACCGGCCAGGACCTGGTGGCCTGGCAGATCCGCATCGCCGAGGGCCATCCGCT GCCGCTGCGGCAGGAGCAGGTGGAACTGCGCGGGCATGCCATCGAGGTCCGCCTCTACGCCGAGGACGCCGG TCGCGGCTTCCTGCCGCAGACCGGCACGGTGCTGCGCTGGGACCCGGAACTGCTGCCCGGCGTACGCATCGA CCATGGCCTGGTCGAGGGGCAGGCGGTGACGCCCTTCTACGACCCGATGCTGGCCAAGCTGATCGCCTACGG GGCGACCCGCGACGAAGCCCGGCGCAAGCTGATCCGCGCGCTGGAGCGCTGCGTGCTGCTGGGGGTCGACGG CAACCAGCGGTTCCTCGCCAACCTCCTGGCGCATCCGGACTTCGCCGCCGGCGAGGCGACCACCGCCTTCAT CGGCGAACGCTTCGCCGAAGACCCCAGCCTGCAACCGCGCCAGCCGGGCGCCGAGGAACTGGCCCTGGCCGC CGCCCTGCTCTACCAGGCCGGCGCCGAGGCCAGTGCGCACCAGCCCGGCCTGGCCGGCTGGCGCAGCGCCGC CGGGGCGCCGTGGAAGATCGTCCTGAAGCACGCCGAACAGCGCCTGGAGATCGGCCTGGAGGTCCTCGAAAG CGGCCGTCGGCCGCGACTGCTGGCGCGCCTGGAGCGACGCGAGATCGCCGTGCGCCTGCTCGACTGCGACGG ACGCTGGGCCAGCGTCGAACTCGACGGCATTCGCCGCCGCCACGCCTACCACCTGGACGGCGGGCGCCTCTG GCTGTACGGCCACGGCGGCAACCTCGAACTGCTCGACGTCACCCACGCCGGCGCCAGCGCCCAGGTCGGCGC CAGCTCCGGCACGCTCAAGGCGCCGATGGACGGCGCCATCGTCGAGGTGCTGGTCGGCGAGGGCGAACGGGT CGGCAAGGGCCAACTGCTGCTGGTGCTGGAGGCAATGAAGATGGAACACCCGCTGAAGGCCGGAGTCGACGG CGTGGTCCGCCGCGTCCAGGTCGGCCGTGGCGAGCAGGTACGCAACCGGCAGGTGCTGGTCGAGGTGGAAGC CGACGCCTGAGACAACCCGCCGCTCATCCGCAACGACAACGACAAGAAAACGGAGACGCCCATGTCACTGCA CGGCAAGACCCTGTTCATCACCGGCGCCAGCCGCGGCATCGGCCGGGAGATAGCCCTGCGCGCCGCGCGCGA TGGCGCCAACCTGGTGATCGCGGCGAAGAGCGCCGAGCCGCATCCGAAGCTGGAAGGCACCATCTTCAGCGT CGCCGCCGAGGTCGAGGCCGCCGGCGGCCAGGCCCTGCCGCTGCAACTCGACGTGCGCGACGAGCAGGCCGT GGCGGCGGCCATGGCCCGCGCCGCCGAACGCTTCGGCGGGATCGACGCGCTGGTCAACAATGCCGGGGCGAT CCGCCTGGTCGGGGTGGAAAAGCTGGAGCCCAAGCGCTTCGACCTGATGTACCAGATCAACACCCGCGCAGT GCTGGTCTGCAGCCAGGCCGCCCTGCCCTACCTGCGCAGGAGCGCCAACGGCCACATCCTCAGCCTGTCGCC GCCGATCAACCTGGCCGGCAGGTGGTTCGCCCAGCACGGCCCCTACACGGTCACCAAGTACGGCATGAGCAT GCTTACCCTGGGGATGCACGAGGAGTTCGGGAAATACGCCATCAGCGTCAACGCGCTGTGGCCGAAGACCAT GATCGCCACCGCCGCCATCGAGTTCGAGCTGGGCAGCCGTGA