ViewGene

Locus Name:
GeneID:
Location:

GeneID:6194
TrivialName: PA14_26800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_26800
PAO1 Ortholog Locus:
Sequence Length:1362
Protein Length:453
Start: 2335106
Stop: 2333745
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04916.1|AE004581_3 (AE004581) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 102/389 (26%), Positives = 149/389 (38%), Gaps = 50/389 (12%)
Sequence:
ATGTCAGGCGCTCCGTTTCAGTTCGCGGGCCTGCTCTCGCGGCAGGCTGATGAGGAAGCGGGTTCCGCGGCC
CGGTTCGGAGGCCACGCGGATGGTCCCGCCATGTTGCTGGATGATCTTGTAGCTGATCGACAGGCCGAGCCC
GGTGCCCTGCCCCACCGGCTTGGTGGTGAAGAACGGGTCGAAGATCCGCCCGAGGACCTCGGCGGGCATGCC
CTTGCCGTTGTCCTGCACGGAGAGGAACACCTGGCGCTCGTCGGCCCAGCTCTTCAGCAGGATGCGGCCGAA
ACGCTCCATGGCCTGCGCGGCGTTGGTCAGCAGGTTCAGCAGCACCTGGTTGATCTGCGACGGCGCGCAGGC
GATAAGCGGCAGCTCGCCGAGCTGGCTGCTGATCTCGGCCTTGTCCTTGATGGCGGTGCGGGCGATCAGCAA
GGCGTTGCGCACGCAGTCGTTGAGGTCGACCTCCTCGCTGAAGGCGCGGTCCAGGCGGGCGAAGTCCTTGAG
CCCGGAAACCAGCTCGCCGATCTGGCCGAGGCCGTAGCGGGTATCGACGAACAACTGCCGCAGGTCCTCGCG
CAACTGTTCGACGGCGGCCTCGCGGCGTACCGCGTCGGCCGCCTGCAGCGCCTGCGCCAGGCGCGCTTCGTC
GCACTGCGGGTCGCCCAGGCAGTCGACCAGCGCCGCCTGGGCATCGGCCAGGCGCAACAAGGGATCGCTCAG
CTCCTCCAGCAGCGCCAGGTTGTTGCCGACGTAGCCGAGCGGCGTGTTCAGCTCGTGTGCGACCCCGGCCAC
CATCTGCCCGAGCGAAGCCATCTTTTCCGACTGCACCAGTTGCGCCTGGGACTCCTTGAGGTCCACCAGCGC
CTTGCGCAGCACCCGGTTGCGCTGGGCGATGCGCGCCTCCATGGCCTTCAGCAGGTCGAGCACGGTGCCCAG
GCCACGGTAGCGGCCCTCTTCGTCGACCAGGGCGAAGTCCTCGGTGATCGGATACTGCAGGCGACCGGTGAC
CTGCTGCGCCGCCTCTTCCAGGCTGGCGCCGAGGGAGACGCTGAGGGGCGCCCGGTTCATGACGTCGCGCAC
CGGATGGCGGCCCCAGAGGTCGCGGCCGAAACGCTGCATGAAGATGTCCTGGAGGGTGTAGCGGCTGACCAG
GCCGAGGACCCGGCGCTCGTCGTCGACCACCGGCAGCGAGAGGAAGGCACGGTGCTCCGGCATCAGCAGGCG
GTCGGCGACGTCGCTGATGCTCATCGCCGGAGTCAGGGGTTCCACCGGGCGCAACAGACGGGACAACGCGCT
CGGAGACATCGGCAACCTCTCGCTGGCAGGCCCGGACGGGGCAATGAAGGGATACCCGCCAGTTAA
Translation:
MSGAPFQFAGLLSRQADEEAGSAARFGGHADGPAMLLDDLVADRQAEPGALPHRLGGEERVEDPPEDLGGHA
LAVVLHGEEHLALVGPALQQDAAETLHGLRGVGQQVQQHLVDLRRRAGDKRQLAELAADLGLVLDGGAGDQQ
GVAHAVVEVDLLAEGAVQAGEVLEPGNQLADLAEAVAGIDEQLPQVLAQLFDGGLAAYRVGRLQRLRQARFV
ALRVAQAVDQRRLGIGQAQQGIAQLLQQRQVVADVAERRVQLVCDPGHHLPERSHLFRLHQLRLGLLEVHQR
LAQHPVALGDARLHGLQQVEHGAQATVAALFVDQGEVLGDRILQATGDLLRRLFQAGAEGDAEGRPVHDVAH
RMAAPEVAAETLHEDVLEGVAADQAEDPALVVDHRQREEGTVLRHQQAVGDVADAHRRSQGFHRAQQTGQRA
RRHRQPLAGRPGRGNEGIPAS*
AnnotationID:6195GeneID:6194
AnnotatorUID: diggins
Modification Date/Time: 2004-12-02 08:08:15
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:12242
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29505
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:36162
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:6194_cdd.html
URL:
GC ORFID: 49196How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2618820Stop: 2620181
Length: 1362
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGTCAGGCGCTCCGTTTCAGTTCGCGGGCCTGCTCTCGCGGCAGGCTGATGAGGAAGCGGGTTCCGCGGCC
CGGTTCGGAGGCCACGCGGATGGTCCCGCCATGTTGCTGGATGATCTTGTAGCTGATCGACAGGCCGAGCCC
GGTGCCCTGCCCCACCGGCTTGGTGGTGAAGAACGGGTCGAAGATCCGCCCGAGGACCTCGGCGGGCATGCC
CTTGCCGTTGTCCTGCACGGAGAGGAACACCTGGCGCTCGTCGGCCCAGCTCTTCAGCAGGATGCGGCCGAA
ACGCTCCATGGCCTGCGCGGCGTTGGTCAGCAGGTTCAGCAGCACCTGGTTGATCTGCGACGGCGCGCAGGC
GATAAGCGGCAGCTCGCCGAGCTGGCTGCTGATCTCGGCCTTGTCCTTGATGGCGGTGCGGGCGATCAGCAA
GGCGTTGCGCACGCAGTCGTTGAGGTCGACCTCCTCGCTGAAGGCGCGGTCCAGGCGGGCGAAGTCCTTGAG
CCCGGAAACCAGCTCGCCGATCTGGCCGAGGCCGTAGCGGGTATCGACGAACAACTGCCGCAGGTCCTCGCG
CAACTGTTCGACGGCGGCCTCGCGGCGTACCGCGTCGGCCGCCTGCAGCGCCTGCGCCAGGCGCGCTTCGTC
GCACTGCGGGTCGCCCAGGCAGTCGACCAGCGCCGCCTGGGCATCGGCCAGGCGCAACAAGGGATCGCTCAG
CTCCTCCAGCAGCGCCAGGTTGTTGCCGACGTAGCCGAGCGGCGTGTTCAGCTCGTGTGCGACCCCGGCCAC
CATCTGCCCGAGCGAAGCCATCTTTTCCGACTGCACCAGTTGCGCCTGGGACTCCTTGAGGTCCACCAGCGC
CTTGCGCAGCACCCGGTTGCGCTGGGCGATGCGCGCCTCCATGGCCTTCAGCAGGTCGAGCACGGTGCCCAG
GCCACGGTAGCGGCCCTCTTCGTCGACCAGGGCGAAGTCCTCGGTGATCGGATACTGCAGGCGACCGGTGAC
CTGCTGCGCCGCCTCTTCCAGGCTGGCGCCGAGGGAGACGCTGAGGGGCGCCCGGTTCATGACGTCGCGCAC
CGGATGGCGGCCCCAGAGGTCGCGGCCGAAACGCTGCATGAAGATGTCCTGGAGGGTGTAGCGGCTGACCAG
GCCGAGGACCCGGCGCTCGTCGTCGACCACCGGCAGCGAGAGGAAGGCACGGTGCTCCGGCATCAGCAGGCG
GTCGGCGACGTCGCTGATGCTCATCGCCGGAGTCAGGGGTTCCACCGGGCGCAACAGACGGGACAACGCGCT
CGGAGACATCGGCAACCTCTCGCTGGCAGGCCCGGACGGGGCAATGAAGGGATACCCGCCAGTTAA