ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6192

TrivialName: PA14_26840

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_26840

PAO1 Ortholog Locus:

Sequence Length: 918

Protein Length: 305

Start: 2335638

Stop: 2336555

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD55197.1| (AL939113) putative membrane protein [Streptomyces coelicolor A3(2)] Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 15/148 (10%)

Sequence:

ATGGCTGAACACCGAACCGGTGGAGGTGCTGGTCAGCGACCTGAAGCTGGCCGGGGAGCATACCGCGCCGCT
GCTGAAATCCCTGGCCCAGGCCCATCCGCGCCTGCTCAGCCTGGTGGTTACGCCGTTCCGCGACACCCAGGC
CCTGCTCGAGCTGATCAACCAGGCGCAGATATTCCGCTACCTGCCCAAGCCGATCCGCAGGGGATTGTTCGA
GAAAGGCCTGAAGGCGGCCGCCGAGCAGGCCTTGTTGTGGCGCGGGCGAAGCCTGCCGGAGGTCGACCGGCT
GGCCGAGGTGCCGCGCGACGAGCGCGAGAAGGAACGGGTCGGCAGCCTGCTCGGCATGCTCGGCCGCCTGCG
CGAGCGGCTGACGGCCTGAACGCCGGCCTAGCCGGCGTCGCAACCGGCGGCCTTGGTCTGGCGGCTTTCCAC
CAGGCGTGCGCGGAGTACGTCGTAGCTCCAGTTGAAGGCCATGGTGTAGGGCAGGAAGAACAGGATCAGGCC
CATGTCGAGGAGGAACGCCTCGACCAGTCCGATCGACAGCCACCAGGCGGCCAGCGGTACCAGCACCACGAT
CAGCCCCAGCTCGAAGAGCATCGCATGCAGCACCCGGACCTGCAGGGTGCGCTGGAAGCCCATGCGCCGCTG
GGCGCGGTCGAAGAGGCTGTTGAAAAGCATGTTCCAGAGCATCGCCACGGTGGAGAACATCAGCGTCAGCGC
ACCCATGTGCGCCAGGGGCTTGTTCATCACCAGCGACAGCACCGGCGCGGTGAGGAGGACGGCCAGGCCCTC
GAAGGCCAGGGCGTGGAAGACCCGCTCCTTGAGAGTCTTGTCGAGGGCGGTGTGGGTGTGGGTCATGGCGAA
CGCTCCCGGTTCGTCGTTGAAGTCGGGCTGTATTGTCATCGGTCTTTGGGATAG

Translation:

MAEHRTGGGAGQRPEAGRGAYRAAAEIPGPGPSAPAQPGGYAVPRHPGPARADQPGADIPLPAQADPQGIVR
ERPEGGRRAGLVVARAKPAGGRPAGRGAARRAREGTGRQPARHARPPARAADGLNAGLAGVATGGLGLAAFH
QACAEYVVAPVEGHGVGQEEQDQAHVEEERLDQSDRQPPGGQRYQHHDQPQLEEHRMQHPDLQGALEAHAPL
GAVEEAVEKHVPEHRHGGEHQRQRTHVRQGLVHHQRQHRRGEEDGQALEGQGVEDPLLESLVEGGVGVGHGE
RSRFVVEVGLYCHRSLG*

AnnotationID:6193 GeneID:6192

AnnotatorUID: diggins

Modification Date/Time: 2004-12-02 08:08:11

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:12238

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29501

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:36165

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 6192_cdd.html

URL:

GC ORFID: `49194`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `2618288`	Stop: `2617371`
Length: `918`
Start Codon: `ATG`	Truncated Start:
Stop Codon: `TAG`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCTGAACACCGAACCGGTGGAGGTGCTGGTCAGCGACCTGAAGCTGGCCGGGGAGCATACCGCGCCGCT GCTGAAATCCCTGGCCCAGGCCCATCCGCGCCTGCTCAGCCTGGTGGTTACGCCGTTCCGCGACACCCAGGC CCTGCTCGAGCTGATCAACCAGGCGCAGATATTCCGCTACCTGCCCAAGCCGATCCGCAGGGGATTGTTCGA GAAAGGCCTGAAGGCGGCCGCCGAGCAGGCCTTGTTGTGGCGCGGGCGAAGCCTGCCGGAGGTCGACCGGCT GGCCGAGGTGCCGCGCGACGAGCGCGAGAAGGAACGGGTCGGCAGCCTGCTCGGCATGCTCGGCCGCCTGCG CGAGCGGCTGACGGCCTGAACGCCGGCCTAGCCGGCGTCGCAACCGGCGGCCTTGGTCTGGCGGCTTTCCAC CAGGCGTGCGCGGAGTACGTCGTAGCTCCAGTTGAAGGCCATGGTGTAGGGCAGGAAGAACAGGATCAGGCC CATGTCGAGGAGGAACGCCTCGACCAGTCCGATCGACAGCCACCAGGCGGCCAGCGGTACCAGCACCACGAT CAGCCCCAGCTCGAAGAGCATCGCATGCAGCACCCGGACCTGCAGGGTGCGCTGGAAGCCCATGCGCCGCTG GGCGCGGTCGAAGAGGCTGTTGAAAAGCATGTTCCAGAGCATCGCCACGGTGGAGAACATCAGCGTCAGCGC ACCCATGTGCGCCAGGGGCTTGTTCATCACCAGCGACAGCACCGGCGCGGTGAGGAGGACGGCCAGGCCCTC GAAGGCCAGGGCGTGGAAGACCCGCTCCTTGAGAGTCTTGTCGAGGGCGGTGTGGGTGTGGGTCATGGCGAA CGCTCCCGGTTCGTCGTTGAAGTCGGGCTGTATTGTCATCGGTCTTTGGGATAG