ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6181

TrivialName: PA14_27320

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_27320

PAO1 Ortholog Locus:

Sequence Length: 1683

Protein Length: 560

Start: 2370209

Stop: 2371891

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAM41083.1| (AE012281) filamentous haemagglutinin [Xanthomonas campestris pv. campestris str. ATCC 33913] Identities = 104/403 (25%), Positives = 151/403 (37%), Gaps = 40/403 (9%)

Sequence:

ATGCCGAGGCGAACGGCATGGACGATGCCGCCCTGCACGATCTGGCCGAGCAGTTGCGCAGCATGGCCGCCT
GGCTGGGCCTGGCGACGGTGGCGATCGAGGGGCGCGGGGAGTTGGCGGTGCGCTTGCGCGGGGTGCTGCTCT
AGCGAACGCTCCCGCCGGGCGGCGGGAGCGGCCGCGGCGCGCTCAGCGGCGTACCTGCTTCAGGGTTTCGGC
GATCAGGAAGGCCAGCTCCAGCGACTGGTCGGCGTTCAGCCGCGGGTCGCAGTGGGTGTGGTAGCGGTCGCT
GAGGCCGTCTTCGGTGATCGGTCGCGAACCGCCGATGCATTCGGTGACGTTCTGCCCGGTCATCTCGATGTG
GATGCCGCCGGCGTAGCTGCCTTCGGCCTGGTGCACCTCGAAGAACTGGCGGACTTCGGCGAGCACGCGGGC
GAAGTCGCGGGTCTTGTAGCCGCTGGAGGCCTTGATGGTATTGCCGTGCATCGGGTCGGAACTCCACAGCAC
CTGGCGGCCCTCGCGCTGGATGGCCTGGATCAGGCGCGGCAGGTGGTCGCCGACCTTGTCGGCACCCATCCG
CACGATCAGGTTGAGGCGGCCCGGATCGTTGTCCGGGTTGAGAATATCGATCAGGCGGATCAGCTCCTCGCT
GTCCATGCTCGGTCCGACCTTGACCCCGATCGGATTGCCTACGCCGCGCAGCATCTCGACATGAGCGCCGTC
GAGCTGGCGGGTGCGGTCGCCGATCCAGAGCATGTGCGCCGAGCAGTCGTACCACTCGCCGGTCAGGCTGTC
GCGGCGGGTCAGGGCTTCCTCGTAGTTCAGCAGGAGCGCTTCGTGGGCGGTGAAGAAGCTGGTTTCGCGGAG
CTGCGGCGCGCTGTCCAGGCCGCAGGCGCGCATGAAGGCGAGGGTCTCGTCGATGCGGTCGGCGAGTTGCTG
GTAGCGCTCGGCCAGCGCCGAGTTGGCGATGAAGTCGAGGTTCCAGCGGTGCACCTGGTGCAGGTCGGCGAA
GCCGCCCTGGGCGAAGGCGCGCAACAGGTTGAGGCTGGCGGTGGACTGGTGGTAGGCCTGCAACAGGCGCTC
CGGGTCCGGCACGCGGCTCTTCTCGTCGAAGCCGATGCCGTTGACTATGTCGCCGCGATAGGCAGGCAGGGT
CACGCCGTTCTGCGTTTCGTCGCCGGAGGAGCGCGGCTTGGCGAACTGGCCGGCCATGCGCCCGACCTTCAC
TACCGGGCAGCCGGCGGCGAAGGTCATTACCACCGCCATCTGCAACAGTACCTTGAAGGTATCGCGGATCTT
CGCCGCGGAAAATTCGGCGAAGCTTTCCGCGCAATCCCCGCCCTGGAGCAAGAAGGCGCGTCCGGCGGTGAC
TTCGGCGAACTGCCGGCGCAGCTCGCGAGCCTCGCCGGCGAAGACCAGCGGCGGGTATCCGGCGAGGGTCTG
CTCGACCCTGGCCAGGTGCGCGGCATCGGGGTACTCGGGTTGTTGCTGGATCGGCTTGGCCCTCCAGCTCTC
GGGGCTCCAGGACTGGCTCATCTACGACTCTTGGCAATGCTCGGGAAAGCGGATTGCGGCATGGTAGAGCAG
CTCGCCGCAGCGCCGCCAGCGATCGTTGCAATAGCGGAAATCCATCGTCGGGCCGGCTTTGCTATGCTGCGG
TGCTTTTGCCGGAGCGCCTGGCGATAG

Translation:

MPRRTAWTMPPCTIWPSSCAAWPPGWAWRRWRSRGAGSWRCACAGCCSSERSRRAAGAAAARSAAYLLQGFG
DQEGQLQRLVGVQPRVAVGVVAVAEAVFGDRSRTADAFGDVLPGHLDVDAAGVAAFGLVHLEELADFGEHAG
EVAGLVAAGGLDGIAVHRVGTPQHLAALALDGLDQARQVVADLVGTHPHDQVEAARIVVRVENIDQADQLLA
VHARSDLDPDRIAYAAQHLDMSAVELAGAVADPEHVRRAVVPLAGQAVAAGQGFLVVQQERFVGGEEAGFAE
LRRAVQAAGAHEGEGLVDAVGELLVALGQRRVGDEVEVPAVHLVQVGEAALGEGAQQVEAGGGLVVGLQQAL
RVRHAALLVEADAVDYVAAIGRQGHAVLRFVAGGARLGELAGHAPDLHYRAAGGEGHYHRHLQQYLEGIADL
RRGKFGEAFRAIPALEQEGASGGDFGELPAQLASLAGEDQRRVSGEGLLDPGQVRGIGVLGLLLDRLGPPAL
GAPGLAHLRLLAMLGKADCGMVEQLAAAPPAIVAIAEIHRRAGFAMLRCFCRSAWR*

AnnotationID:6182 GeneID:6181

AnnotatorUID: diggins

Modification Date/Time: 2005-04-06 19:07:36

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12218

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29480