ViewGene
Locus Name:
GeneID:
Location:

GeneID:6167
TrivialName: PA14_27820
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_27820
PAO1 Ortholog Locus:
Sequence Length:681
Protein Length:226
Start: 2410918
Stop: 2411598
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGATCAGGCGCTGCGGGTAGTCGTCGTCGACCTTGGCGCGCAGGCGGCGGATGGCCACCTCGATGACGTT
GGTATCGCTGTCGAAGTTCATGTCCCAGACCTGCGAGGCGATCAGCGACTTGGGCAGCACCTCGCCGCTGCG
CCGCAGCAGCAGTTCGAGCAGGGCGAACTCCTTGGCGGTGAGGTCGATCCGCTTGCCCTGGCGTTGCACCCG
GCGGCGCAGCAAATCGAGTTCGAGGTCGGCCAGTTGCAGGGTGGTCTCCTGCAACTGCTGGCTGCCCCGGCG
CAGCAGGGTGCGCACCCGGGCGAGCAGTTCGACGAAGGCGAACGGCTTCACCAGGTAATCGTCGGCGCCTTG
TTCGAGGCCGCGCACGCGGTCCTCTACGGCATCGCGGGCGGTCAGGAACAGCACCGGTATGGTCATCCCGGC
GTCGCGCACGCTGCGCAGGATCTGCCAGCCGTCACGGCCGGGCAGCATGACGTCGAGGATCAGCAGGTCGTA
GTCGCCGCCCAGGGCCAGTTGCTCGCCCTCGTTGCCATCGTCGCTCAGGTCGACGGCGAAGCCTGCCTCGGC
GAGCCCCTGGCGCAGGTACTGGCCGATGCGCGGTTCGTCTTCGACGATCAGCAGTTTCATGTTCATCCCTCG
TTACATTTGCCGGCCATGCCGACCTGTTTCTGA
Translation:
MDQALRVVVVDLGAQAADGHLDDVGIAVEVHVPDLRGDQRLGQHLAAAPQQQFEQGELLGGEVDPLALALHP
AAQQIEFEVGQLQGGLLQLLAAPAQQGAHPGEQFDEGERLHQVIVGALFEAAHAVLYGIAGGQEQHRYGHPG
VAHAAQDLPAVTAGQHDVEDQQVVVAAQGQLLALVAIVAQVDGEACLGEPLAQVLADARFVFDDQQFHVHPS
LHLPAMPTCF*
AnnotationID:6168GeneID:6167
AnnotatorUID: diggins
Modification Date/Time: 2005-04-06 09:09:22
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:12190




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29451




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49169How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2543008Stop: 2542328

          
Length: 681


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGATCAGGCGCTGCGGGTAGTCGTCGTCGACCTTGGCGCGCAGGCGGCGGATGGCCACCTCGATGACGTT 
GGTATCGCTGTCGAAGTTCATGTCCCAGACCTGCGAGGCGATCAGCGACTTGGGCAGCACCTCGCCGCTGCG 
CCGCAGCAGCAGTTCGAGCAGGGCGAACTCCTTGGCGGTGAGGTCGATCCGCTTGCCCTGGCGTTGCACCCG 
GCGGCGCAGCAAATCGAGTTCGAGGTCGGCCAGTTGCAGGGTGGTCTCCTGCAACTGCTGGCTGCCCCGGCG 
CAGCAGGGTGCGCACCCGGGCGAGCAGTTCGACGAAGGCGAACGGCTTCACCAGGTAATCGTCGGCGCCTTG 
TTCGAGGCCGCGCACGCGGTCCTCTACGGCATCGCGGGCGGTCAGGAACAGCACCGGTATGGTCATCCCGGC 
GTCGCGCACGCTGCGCAGGATCTGCCAGCCGTCACGGCCGGGCAGCATGACGTCGAGGATCAGCAGGTCGTA 
GTCGCCGCCCAGGGCCAGTTGCTCGCCCTCGTTGCCATCGTCGCTCAGGTCGACGGCGAAGCCTGCCTCGGC 
GAGCCCCTGGCGCAGGTACTGGCCGATGCGCGGTTCGTCTTCGACGATCAGCAGTTTCATGTTCATCCCTCG 
TTACATTTGCCGGCCATGCCGACCTGTTTCTGA