ViewGene

Locus Name:
GeneID:
Location:

GeneID:6156
TrivialName: PA14_28460
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_28460
PAO1 Ortholog Locus:
Sequence Length:231
Protein Length:76
Start: 2457898
Stop: 2457668
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN54669.1|AE015607_10 (AE015607) hypothetical protein [Shewanella oneidensis MR-1]
Identities = 34/76 (44%), Positives = 44/76 (57%)
Sequence:
ATGGACACCAGCCCGCACACCTTTTCCAACCTGTTCCGCCAGTTGGGGCTCCCCGCTGGGCGGGACGACATC
GTCGCCTTTCTCGCCCGGCACCACCTCGAGGAGGGCACGGCGCTGCCCGATGCGCCATTCTGGAACCCTGCC
CAGGCCAGCTTCCTGCGCGAGGCCCTGGCCGAGGACTCCGACTGGGCCGAACAGGTCGATGAACTGGCCTTG
CAACTGACCCGCTGA
Translation:
MDTSPHTFSNLFRQLGLPAGRDDIVAFLARHHLEEGTALPDAPFWNPAQASFLREALAEDSDWAEQVDELAL
QLTR*
AnnotationID:6157GeneID:6156
AnnotatorUID: diggins
Modification Date/Time: 2005-04-05 10:10:40
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12174
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29431
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49158How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2496028Stop: 2496258
Length: 231
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGACACCAGCCCGCACACCTTTTCCAACCTGTTCCGCCAGTTGGGGCTCCCCGCTGGGCGGGACGACATC
GTCGCCTTTCTCGCCCGGCACCACCTCGAGGAGGGCACGGCGCTGCCCGATGCGCCATTCTGGAACCCTGCC
CAGGCCAGCTTCCTGCGCGAGGCCCTGGCCGAGGACTCCGACTGGGCCGAACAGGTCGATGAACTGGCCTTG
CAACTGACCCGCTGA