ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6148

TrivialName: PA14_28640

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_28640

PAO1 Ortholog Locus:

Sequence Length: 2133

Protein Length: 710

Start: 2469129

Stop: 2466997

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:

Sequence:

TTGGCGACCACGCCGGGAAACCGCCTGTGCCAACAGCTCAGCGAACTGGGTGACGGGCATGGAGCCCAGGTC
TTCCCCTTCGCGCGTACGCACCGCGACGGCCTTCGATTCAACTTCCCGATCTCCAATAACCAAGAGATAGGG
AACCTTGAGCAAAGTATGCTCGCGGATTTTAAAGCCGATCTTCTCGTTTCTCAAGTCGGACTTGGCACGGAA
TCCGCTTTCCCCGAGGATCCGCACCACCTCGGCGGCGAAATCGGCCTGCTTGTCGGTGATATTCATCACCAC
CGCCTGGGTCGGCGCCAGCCAGGCCGGGAAGGCTCCGGCGTAGTGCTCGATGAGCATGCCGATGAAGCGCTC
GAAGGACCCGAGGATCGCACGGTGCAGCATCACCGGGCGCTTACGGTTGTTGTCCTCGGCGATGTAGCTGGC
GTCCAGGCGCTCCGGCAGGTTCGGGTCGTACTGCAGGGTGCCGCACTGCCAGTTACGGCCGAGGCAGTCCTT
CAGGGTGAACTCGATCTTTGGCCCATAGAACGCGCCCTCGCCCGGCTGGTATTCCCAGGCCAGGCCGGATTC
GTTCAGCGCATCGGCCAGCGCGCCTTCGGCGCGATCCCACAGCTCGTCGGAACCGACGCGCTTGGCCGGACG
GGTCGACAGCTTCATGGCGATGTCGGTGAAACCGAAGTCGCGGTAGACCTGCAAGGTCAGCTTGATGAAATC
GGCCGCTTCCTTCTTCACCTGCTCTTCGGTGCAGAAGATATGCGCGTCGTCCTGGGTGAAGCCGCGTACGCG
CATGATCCCGTGCAGCGCGCCGGACGGCTCGTTGCGGTGGCAGGCGCCGAACTCGGCGAGGCGCAGCGGCAG
GTCGCGGTAGGACTTCAGGCCCTGGTTGAAGATCTGCACGTGGCACGGGCAGTTCATCGGCTTGACCGCGTA
GTCGCGGCTTTCCGAGGAGGTGGTGAACATGTTCTCGGCGTAGTTCGACCAGTGGCCCGAACGCTCCCAGAG
GATGCGGTCGACCACCTGCGGGGTACGCACTTCGACATAGCCATGGTCGCGCTGGACCTTGCGCATGTACTG
CTCGAGCACCTGGTAGACGCTCCAGCCATTCGGGTGCCAGAACACCATGCCCGGCGCTTCTTCCTGCAGGTG
GAACAGGTCGAGCTGCTTGCCGATGCGGCGATGGTCGCGCTTCTCGGCCTCTTCGATGCGCTGGATGTAGGC
CGCCAGTTGCTTCTTGTCGGCCCAGGCGGTGCCGTAGATGCGTTGCAACTGCTCGTTCTTCGAGTCGCCGCG
CCAGTAGGCGCCGGAAATCTTGGTCAGCTGGAACGCCTTGAGGAAGCGGGTGTTCGGCACGTGCGGGCCGCG
GCACATGTCCACGTACTCCTCATGGAAGTACAGGCCCATGGCCTTCTCGTCCGGCATGTCGTCGATCAGGCG
CAGCTTGTAGTCTTCGCCACGGGACTTGAACAGCTCGATGACCTCGGCGCGCGGGGTCATCTTCTTGATCAC
GTCGTAGTCCTTGTCGATCAGCTCGCGCATGCGCTGCTGGATCGCCGCCATGTCCTCGGGGGTGAAGGGGCG
CTCGAAGAAGATGTCGTAGTAGAAGCCTTCCTCGATCACCGGGCCGATGACCATCTTCGCGGTCGGATAGAG
CTGCTTGACCGCATGGCCGACCAGGTGGGCGCAGGAGTGGCGGATGATCTCCAGTCCTTCCTCGTCCTTGGG
CGTGATGATCTGCAGGGTCGCGTCGCGATCGATGGTGTCGCAGGCGTCGACCAGGCGGCCGTCGACCTTGCC
GGCGAGGGTCGCCTTGGCCAGGCCTGCGCCGATGGATTGGGCCACCTCGGCCACGGAGACCGGGTGATCGAA
GGAACGTTGACTGCCGTCGGGAAGAGTAATGATGGGCATGGCGCCTCCTCTCCTAGTGGTGACCCCTACCAA
AGGCCACGTGGGTTGGGATGTGCCAGTAAGCGTCGCCCGCCGGGCCGGCCTGCCTCACAGTGGCAGGCGCCT
TGCGGCACCCCTGCGCCGAAGCGCGCGGACGGAGATCACTGGGAATGGATACTGACGAAAAACGCCGGAGCT
GATCCGGCGCGAAGCGCCCATGGTAAAGCATCCGCGGCGAGCTGA

Translation:

MATTPGNRLCQQLSELGDGHGAQVFPFARTHRDGLRFNFPISNNQEIGNLEQSMLADFKADLLVSQVGLGTE
SAFPEDPHHLGGEIGLLVGDIHHHRLGRRQPGREGSGVVLDEHADEALEGPEDRTVQHHRALTVVVLGDVAG
VQALRQVRVVLQGAALPVTAEAVLQGELDLWPIERALARLVFPGQAGFVQRIGQRAFGAIPQLVGTDALGRT
GRQLHGDVGETEVAVDLQGQLDEIGRFLLHLLFGAEDMRVVLGEAAYAHDPVQRAGRLVAVAGAELGEAQRQ
VAVGLQALVEDLHVARAVHRLDRVVAAFRGGGEHVLGVVRPVARTLPEDAVDHLRGTHFDIAMVALDLAHVL
LEHLVDAPAIRVPEHHARRFFLQVEQVELLADAAMVALLGLFDALDVGRQLLLVGPGGAVDALQLLVLRVAA
PVGAGNLGQLERLEEAGVRHVRAAAHVHVLLMEVQAHGLLVRHVVDQAQLVVFATGLEQLDDLGARGHLLDH
VVVLVDQLAHALLDRRHVLGGEGALEEDVVVEAFLDHRADDHLRGRIELLDRMADQVGAGVADDLQSFLVLG
RDDLQGRVAIDGVAGVDQAAVDLAGEGRLGQACADGLGHLGHGDRVIEGTLTAVGKSNDGHGASSPSGDPYQ
RPRGLGCASKRRPPGRPASQWQAPCGTPAPKRADGDHWEWILTKNAGADPARSAHGKASAAS*

AnnotationID:6149 GeneID:6148

AnnotatorUID: diggins

Modification Date/Time: 2004-12-08 08:08:37

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15958

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29415

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:36296

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 6148_cdd.html

URL:

GC ORFID: `49150`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `2484797`	Stop: `2486929`
Length: `2133`
Start Codon: `TTG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGGCGACCACGCCGGGAAACCGCCTGTGCCAACAGCTCAGCGAACTGGGTGACGGGCATGGAGCCCAGGTC TTCCCCTTCGCGCGTACGCACCGCGACGGCCTTCGATTCAACTTCCCGATCTCCAATAACCAAGAGATAGGG AACCTTGAGCAAAGTATGCTCGCGGATTTTAAAGCCGATCTTCTCGTTTCTCAAGTCGGACTTGGCACGGAA TCCGCTTTCCCCGAGGATCCGCACCACCTCGGCGGCGAAATCGGCCTGCTTGTCGGTGATATTCATCACCAC CGCCTGGGTCGGCGCCAGCCAGGCCGGGAAGGCTCCGGCGTAGTGCTCGATGAGCATGCCGATGAAGCGCTC GAAGGACCCGAGGATCGCACGGTGCAGCATCACCGGGCGCTTACGGTTGTTGTCCTCGGCGATGTAGCTGGC GTCCAGGCGCTCCGGCAGGTTCGGGTCGTACTGCAGGGTGCCGCACTGCCAGTTACGGCCGAGGCAGTCCTT CAGGGTGAACTCGATCTTTGGCCCATAGAACGCGCCCTCGCCCGGCTGGTATTCCCAGGCCAGGCCGGATTC GTTCAGCGCATCGGCCAGCGCGCCTTCGGCGCGATCCCACAGCTCGTCGGAACCGACGCGCTTGGCCGGACG GGTCGACAGCTTCATGGCGATGTCGGTGAAACCGAAGTCGCGGTAGACCTGCAAGGTCAGCTTGATGAAATC GGCCGCTTCCTTCTTCACCTGCTCTTCGGTGCAGAAGATATGCGCGTCGTCCTGGGTGAAGCCGCGTACGCG CATGATCCCGTGCAGCGCGCCGGACGGCTCGTTGCGGTGGCAGGCGCCGAACTCGGCGAGGCGCAGCGGCAG GTCGCGGTAGGACTTCAGGCCCTGGTTGAAGATCTGCACGTGGCACGGGCAGTTCATCGGCTTGACCGCGTA GTCGCGGCTTTCCGAGGAGGTGGTGAACATGTTCTCGGCGTAGTTCGACCAGTGGCCCGAACGCTCCCAGAG GATGCGGTCGACCACCTGCGGGGTACGCACTTCGACATAGCCATGGTCGCGCTGGACCTTGCGCATGTACTG CTCGAGCACCTGGTAGACGCTCCAGCCATTCGGGTGCCAGAACACCATGCCCGGCGCTTCTTCCTGCAGGTG GAACAGGTCGAGCTGCTTGCCGATGCGGCGATGGTCGCGCTTCTCGGCCTCTTCGATGCGCTGGATGTAGGC CGCCAGTTGCTTCTTGTCGGCCCAGGCGGTGCCGTAGATGCGTTGCAACTGCTCGTTCTTCGAGTCGCCGCG CCAGTAGGCGCCGGAAATCTTGGTCAGCTGGAACGCCTTGAGGAAGCGGGTGTTCGGCACGTGCGGGCCGCG GCACATGTCCACGTACTCCTCATGGAAGTACAGGCCCATGGCCTTCTCGTCCGGCATGTCGTCGATCAGGCG CAGCTTGTAGTCTTCGCCACGGGACTTGAACAGCTCGATGACCTCGGCGCGCGGGGTCATCTTCTTGATCAC GTCGTAGTCCTTGTCGATCAGCTCGCGCATGCGCTGCTGGATCGCCGCCATGTCCTCGGGGGTGAAGGGGCG CTCGAAGAAGATGTCGTAGTAGAAGCCTTCCTCGATCACCGGGCCGATGACCATCTTCGCGGTCGGATAGAG CTGCTTGACCGCATGGCCGACCAGGTGGGCGCAGGAGTGGCGGATGATCTCCAGTCCTTCCTCGTCCTTGGG CGTGATGATCTGCAGGGTCGCGTCGCGATCGATGGTGTCGCAGGCGTCGACCAGGCGGCCGTCGACCTTGCC GGCGAGGGTCGCCTTGGCCAGGCCTGCGCCGATGGATTGGGCCACCTCGGCCACGGAGACCGGGTGATCGAA GGAACGTTGACTGCCGTCGGGAAGAGTAATGATGGGCATGGCGCCTCCTCTCCTAGTGGTGACCCCTACCAA AGGCCACGTGGGTTGGGATGTGCCAGTAAGCGTCGCCCGCCGGGCCGGCCTGCCTCACAGTGGCAGGCGCCT TGCGGCACCCCTGCGCCGAAGCGCGCGGACGGAGATCACTGGGAATGGATACTGACGAAAAACGCCGGAGCT GATCCGGCGCGAAGCGCCCATGGTAAAGCATCCGCGGCGAGCTGA