ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6135

TrivialName: PA14_29310

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_29310

PAO1 Ortholog Locus:

Sequence Length: 1518

Protein Length: 505

Start: 2537193

Stop: 2535676

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK71501.1| (AF348165) NADH dehydrogenase [Pseudomonas xiamenensis] Identities = 72/296 (24%), Positives = 109/296 (36%), Gaps = 15/296 (5%)

Sequence:

ATGAGCAAGCCTCGGCGCAGGACGTTTCCACCGCGACCGCTGCATTCCTTGAACAACTGGGTCGCGCGGATG
TCCCGCCGGACACGTTCGCCAAGGTGCTGGAGCAAAGCCTCAAGCTCATGGCTGCGGAGACGGCGCCAGCCC
AGTAGGCGAGCGCCTCCTCCAGCCCCTTCCGGTCAGGATTCAGGCCACCACCGGAATCAGTGGGTCGGCCGC
CGCCAGCGCCACGGCGCGGTCCGCCGCCGGCGGGTAGATCCACACGCCATTGATCTCGGTCTTGATCTTCTT
GCCCTCCTCGCGCACGAACCGTACCTGGCGGTCCCAGCCCTCAGTGAACACCGCGCCCCAGCCGCCGAGGTC
GAGACAGGTCACGTACTTCACCTGGCTGTAGGGAATCGGCTCGACGCCGAGCAGGTCGGCGGCCACGTTGTT
GCCGGCCGAGCGACCCAGGGCGATGGCGTGCTGGCAGGTCATCAGGGCATGGTTGCCGAGGTCGTCGGTAGC
CGCGCGGGCCACGTCGCCGGTGGCGTAGACATCGTCGAGGCCGAGCACCTTGAGGTTGCGGTCGACATGCAG
GCGACCCTGGGCATCGCGCTCGCCCGGAATCTGTCCGGTCAGCGTGCTGGCCCGCACGCCCACGGTCCAGAC
CACGGTCTTCGCCTCGATCCGCTGGCCGTCGTCGAGCGTCACGCCCTCGGCATCCACCGCCGCCACCGAACG
CCCCAGGCACCACTCCACGCCCAGTTCCGCCGAGGCCTCGGCGATCAAGCCGCTCAGGTCCGCGCCCATCGA
TGCGCCGATGGCGGCGCCGCGGTCGACCACGATCACTCGCAGCGCCGCTTTCTCGCCGAGGATCGCCCGCAG
GCGCGCCGGCATCTCGGTGGCGGTCTCGATGCCGGTGAAGCCGCCGCCGGCGACCACCACGGTGTTGCGTGC
CGGCGAATCCGGCAAGTCGCGCAGGGCATGCAGGTGTGCCTCCAGGCGCAGGGCGTCTTCCAACTGGTCGAC
ATCGAAGGCCGCGTCGATGCCGACGACACTCGCCGGACGCCACACGCCGCTGCCGGCCGCCAGTACCAGGCG
GTCGTAGTCCAGCTGCGCCGGCGTGCCCTCGGCATCGCGGTACTCCACCCGCTTGCCGGCCACGTCGATGCG
CTGCGCGCTGCCCTGCACGAAACGCACGCCGACCGCGGCGAACAATTCGCCCAGCGGCGCCGCCATGCGCTG
CACGTCAGGCTCGTAGAAACGCGGGCGGATGCGCAGCTCAGGCTGCGGCGCGAGCACCGCGACCTCGACGTC
GTCGCGGCCCTGGCGGTCGAGCTGGCGGACTGCGCTCAGCGCGCTCCACATGCCGGCGAATCCGGCACCGAC
GATCAGGATACGTTGTTTCATTGGGGGCTCCTGGAGGGAAAGGACGGGATGTCCGGAGAAAGGCCTCTCCGT
AACTACGACTATATTTGTCGTAGTTACGGAGATCAATCCCCGAAAAGCGCTCCGACAGGCAACCGCCCCTCG
CCGTGA

Translation:

MSKPRRRTFPPRPLHSLNNWVARMSRRTRSPRCWSKASSSWLRRRRQPSRRAPPPAPSGQDSGHHRNQWVGR
RQRHGAVRRRRVDPHAIDLGLDLLALLAHEPYLAVPALSEHRAPAAEVETGHVLHLAVGNRLDAEQVGGHVV
AGRATQGDGVLAGHQGMVAEVVGSRAGHVAGGVDIVEAEHLEVAVDMQATLGIALARNLSGQRAGPHAHGPD
HGLRLDPLAVVERHALGIHRRHRTPQAPLHAQFRRGLGDQAAQVRAHRCADGGAAVDHDHSQRRFLAEDRPQ
ARRHLGGGLDAGEAAAGDHHGVACRRIRQVAQGMQVCLQAQGVFQLVDIEGRVDADDTRRTPHAAAGRQYQA
VVVQLRRRALGIAVLHPLAGHVDALRAALHETHADRGEQFAQRRRHALHVRLVETRADAQLRLRREHRDLDV
VAALAVELADCAQRAPHAGESGTDDQDTLFHWGLLEGKDGMSGERPLRNYDYICRSYGDQSPKSAPTGNRPS
P*

AnnotationID:6136 GeneID:6135

AnnotatorUID: danlee

Modification Date/Time: 2005-10-12 12:12:41

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:12137

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29389