ViewGene

Locus Name:
GeneID:
Location:

GeneID:6131
TrivialName: PA14_29430
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_29430
PAO1 Ortholog Locus:
Sequence Length:1239
Protein Length:412
Start: 2551749
Stop: 2552987
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGGTGAAGCGCATGACGAACTCGTCGACCACCTGCAGCGCCCCCACCGTCCGCGAAATCGGCGTGAGGGT
CATGTCCGGCGGGTTGCCGTGGATGAAGTGATGGCGGTAGAAGCGGCTCAGTTCGCGCTGGCCGACGCCGCC
GGTGAGGGTCGGGACATGGTTGACGTAGGGCTCGGCGACCATGGTCGCCATGGTCGCGGCGACGTCGCGGGT
ATCGAACTCGTGGCGCACATGCTCGTCCCACAGCGCGGAGAGGTCGAAGTTCGGCCCGATCTCCCGCTTCAG
GGCGGCGATGCTGCGTTCGTGGGCCATCAGGTAGGCCGGTTTGTCGAAGTGCATGCCGCCGACGCGGGCGAA
GGCGTGATCGACGCCGGGGTAGAGGTACAACTCGGTCTTGGGCAGGTTGCGCAGGCAGGGCAGGATCGCGTC
GCGGGCCTGCTGCGGGCAGTAGGCGTCCTGTTCGGCGAAATGCAGCACCAGCCGGCCCTTGATCTGTTTCGC
CTCGTCGAGCAGCGCCTCGATGCCCATGCCATAGTAGCCCACCGAGCAGGAGACGTCGGTGCGCGTCGCGGC
GAGGTAGGCCAGCTTGCCGCCCATGCAGAAGCCGACGAAGCCGATCCCGGCGTGGACCACCTCCTCGCGTTG
GCGCAGGTGCTCGATACAGGCGGCGATGTCGTCCACCGCGGCGTCCAGGTCGATGCGCTGGAACAGCTCGAT
GGCCTTGGCGAAGGCCGCTTCGTCGTAGCCCAGGTCGACCCCCGGCTGGAGCCGCCAGAACAGGTCGGGGAC
CAGGGCCACGTAGCCCTCTTCGGCGTACAGGTCGGCCACCGCGCGCATGTTCGCGTTGACGCCGAAGATTTC
CTGACCGATCACCACGCCCGGCCCCTTGCCGCTGGCGGGGAGCGCGAGATACGCGTCGAACCGGCCGCTGCC
GTCGGACGCGGCGATGCTGACGTACTGTCCCATGCCTGGATTCCTCATCGGGTTGTTGTTGGAGTGGGAAAA
CGGGAAAGCGAAGCGAACCAGCCTAGTAGGAACCGGCCGGCGGGTCATTGGCTATCCGCATGCTGGCGGGAG
GGTATCCGGATTGTCCGGGAGCGAGGGGCGGGAGGCGGCGCGATCCTCGGCGAGCCGCTCGCGGATACCGCT
CAGTCCCGCTGGCGCTGCCAGGGCGGGCCCGCGGCGAACCGCGCTTCCACCCATTGGCGGAACGCGCTGGCC
GCCGCCGTGGCGTAG
Translation:
MGEAHDELVDHLQRPHRPRNRREGHVRRVAVDEVMAVEAAQFALADAAGEGRDMVDVGLGDHGRHGRGDVAG
IELVAHMLVPQRGEVEVRPDLPLQGGDAAFVGHQVGRFVEVHAADAGEGVIDAGVEVQLGLGQVAQAGQDRV
AGLLRAVGVLFGEMQHQPALDLFRLVEQRLDAHAIVAHRAGDVGARRGEVGQLAAHAEADEADPGVDHLLAL
AQVLDTGGDVVHRGVQVDALEQLDGLGEGRFVVAQVDPRLEPPEQVGDQGHVALFGVQVGHRAHVRVDAEDF
LTDHHARPLAAGGEREIRVEPAAAVGRGDADVLSHAWIPHRVVVGVGKRESEANQPSRNRPAGHWLSACWRE
GIRIVRERGAGGGAILGEPLADTAQSRWRCQGGPAANRASTHWRNALAAAVA*
AnnotationID:6132GeneID:6131
AnnotatorUID: diggins
Modification Date/Time: 2005-03-07 18:06:32
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15951
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29381
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49133How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2402177Stop: 2400939
Length: 1239
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGGTGAAGCGCATGACGAACTCGTCGACCACCTGCAGCGCCCCCACCGTCCGCGAAATCGGCGTGAGGGT
CATGTCCGGCGGGTTGCCGTGGATGAAGTGATGGCGGTAGAAGCGGCTCAGTTCGCGCTGGCCGACGCCGCC
GGTGAGGGTCGGGACATGGTTGACGTAGGGCTCGGCGACCATGGTCGCCATGGTCGCGGCGACGTCGCGGGT
ATCGAACTCGTGGCGCACATGCTCGTCCCACAGCGCGGAGAGGTCGAAGTTCGGCCCGATCTCCCGCTTCAG
GGCGGCGATGCTGCGTTCGTGGGCCATCAGGTAGGCCGGTTTGTCGAAGTGCATGCCGCCGACGCGGGCGAA
GGCGTGATCGACGCCGGGGTAGAGGTACAACTCGGTCTTGGGCAGGTTGCGCAGGCAGGGCAGGATCGCGTC
GCGGGCCTGCTGCGGGCAGTAGGCGTCCTGTTCGGCGAAATGCAGCACCAGCCGGCCCTTGATCTGTTTCGC
CTCGTCGAGCAGCGCCTCGATGCCCATGCCATAGTAGCCCACCGAGCAGGAGACGTCGGTGCGCGTCGCGGC
GAGGTAGGCCAGCTTGCCGCCCATGCAGAAGCCGACGAAGCCGATCCCGGCGTGGACCACCTCCTCGCGTTG
GCGCAGGTGCTCGATACAGGCGGCGATGTCGTCCACCGCGGCGTCCAGGTCGATGCGCTGGAACAGCTCGAT
GGCCTTGGCGAAGGCCGCTTCGTCGTAGCCCAGGTCGACCCCCGGCTGGAGCCGCCAGAACAGGTCGGGGAC
CAGGGCCACGTAGCCCTCTTCGGCGTACAGGTCGGCCACCGCGCGCATGTTCGCGTTGACGCCGAAGATTTC
CTGACCGATCACCACGCCCGGCCCCTTGCCGCTGGCGGGGAGCGCGAGATACGCGTCGAACCGGCCGCTGCC
GTCGGACGCGGCGATGCTGACGTACTGTCCCATGCCTGGATTCCTCATCGGGTTGTTGTTGGAGTGGGAAAA
CGGGAAAGCGAAGCGAACCAGCCTAGTAGGAACCGGCCGGCGGGTCATTGGCTATCCGCATGCTGGCGGGAG
GGTATCCGGATTGTCCGGGAGCGAGGGGCGGGAGGCGGCGCGATCCTCGGCGAGCCGCTCGCGGATACCGCT
CAGTCCCGCTGGCGCTGCCAGGGCGGGCCCGCGGCGAACCGCGCTTCCACCCATTGGCGGAACGCGCTGGCC
GCCGCCGTGGCGTAG