ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6126

TrivialName: PA14_29700

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 15:03:15

LocusName: PA14_29700

PAO1 Ortholog Locus:

Sequence Length: 1236

Protein Length: 411

Start: 2571988

Stop: 2573223

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAC32349.1| (AL939118) putative bifunctional protein (histidine kinase and regulator) [Streptomyces coelicolor A3(2)] Identities = 83/308 (26%), Positives = 107/308 (34%), Gaps = 44/308 (14%)

Sequence:

TTGCAGGCGTTCGCCGAGCCGGCCGCCGTCGACCAGTTCGAGGAATTCGTCGCCGAGCCTGCGGCTTTCCGC
CATCGCCTGGCGCCAGTAGCGCTCGCGGCCGTCGTCGTCGCCGAGGTAGCGGGTGAAGTCCTTGCGGTCCGG
CAGCTTGGCGTGCGGcagGCGCGCCaggTACTCGCGCGACGGCGCCAGCAGCAGCACGTCCTGCAGGCGCCC
GGCGTCGCCACGGCGCCAGGGCAAGCCCTTGTCGAACCAGCCGGGGATCACCTTGTCGGTGAAGTGCGGGTA
GAGCACCACGCCGCGGTCCTCGTAGGGCAGGTCGAGATGGTAGTCGAGCAGGCCGCCGTCGCGGTAGGTGCC
GGGGCCGGCGCCAGGCAGGTTGCGGACGCCTTCCATGACCATCGGGATCGAGCCGGAGGCGAGCAGCGCCTG
GCGCAGGTTGCCGCCGTCCAGGTGCAGGTAGCGCGACGGGAAGTCGGTCAGCGCGGCCAGCGGCGGCGCCTG
GCGGGCGTCATGCAGGATCACCCGTTCGAAGTGGCGGTGCAGGTGGCGGCGGCCGATCAGGTTGTCGCGGAT
CACCGAGGACAGCCCCAGGCCGAGGCTGGCCTTGTGGTCGTGGGCGAGGCGCCCGTGGCTCTTCACCACCAC
CACGTTGAGGCGGTACAGCGGGTTGTCGAGGATCCGCGCGTCCTGGCCGGCGAGCAGGTCGTCGAGCATCGC
CGCGCACTTGCGCGAGACTTCGGCGATGCTCACGCCTTTGGGAAAACGCTGCCGGGTGTACAGCTCGCCGAG
GCGGGTGAGGCCGGCCACGGCGTCGGGCAGGCAGGCGCTGGCGAAGCGCCAGGAACCGATGGAGGCGCCGAT
CAGCGAGCGTTCGCGCGGGGCGCGCGGCAGCCACTCGCCGAAGATCGCCAGGTCCAGTCCCTGGATGCCCAG
CGCCTTTGGCCCGCCGGCGGCACCGGGGACGATGCCGACGTCGGCCGGCTGCAGTCCGCGCTCGCGGATGCG
GGCGAGGGCGCGGCGACCGGCCTTGAGGGTCAGTGCGGGGGACTTGATCTGGATGGCTGGCATGCTGGTCTT
CTCCCTTGCGGACCGGCGATTATAGGACGAGTTGTCGCAGGACCAAGCGCTTTCGAACGCCGGCGAGCCCCA
TCGCAGAGGCTTTCCGTTACCCTATGGCGCGCCCCGGCCATGTCCTTGCGGCAAATTCAGCTTCAATTAAGA
GCGCCCGGTTAA

Translation:

MQAFAEPAAVDQFEEFVAEPAAFRHRLAPVALAAVVVAEVAGEVLAVRQLGVRQARQVLARRRQQQHVLQAP
GVATAPGQALVEPAGDHLVGEVRVEHHAAVLVGQVEMVVEQAAVAVGAGAGARQVADAFHDHRDRAGGEQRL
AQVAAVQVQVARREVGQRGQRRRLAGVMQDHPFEVAVQVAAADQVVADHRGQPQAEAGLVVVGEAPVALHHH
HVEAVQRVVEDPRVLAGEQVVEHRRALARDFGDAHAFGKTLPGVQLAEAGEAGHGVGQAGAGEAPGTDGGAD
QRAFARGARQPLAEDRQVQSLDAQRLWPAGGTGDDADVGRLQSALADAGEGAATGLEGQCGGLDLDGWHAGL
LPCGPAIIGRVVAGPSAFERRRAPSQRLSVTLWRAPAMSLRQIQLQLRAPG*

AnnotationID:6127 GeneID:6126

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 15:03:28

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15947

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29371