ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6125

TrivialName: PA14_29780

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_29780

PAO1 Ortholog Locus:

Sequence Length: 1317

Protein Length: 438

Start: 2580134

Stop: 2578818

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC49570.1| (AP005950) ribonuclease E [Bradyrhizobium japonicum USDA 110] Identities = 75/299 (25%), Positives = 113/299 (37%), Gaps = 47/299 (15%)

Sequence:

ATGACGCCCAATAAAAAACGGGATTCCCGTTTCATCGGCAATCCCGTCGGAAGCTTAAGCGGCCGGCCCGAC
ATTCCGTCAGGCGACCGCCCGAAATGGGACTCAGAGCAACATCGCGGCGGCCCAGCCGAACACCAGCAACGG
CAGGTTGTAGTGCAGGAAGGTCGGCACCACGGTGTCCCAGATGTGATTGTGCTGGCCGTCGACGTTGAGCCC
GGAGGTCGGCCCGAGGGTCGAGTCCGACGCCGGAGAACCTGCATCCCCCAGCGCGCCGGCGGTGCCGACGAT
GCTGACGATGGCCAGCGGGCTGAAGCCCAGTTGCACCGCCAGCGGGACGAAGATCGCGGCGATGATCGGCAC
GGTGGAGAACGACGAGCCGATGCCCATGGTGACCAGCAGGCCGACCAGCAGCATCAGCATGGCGCCGACCGC
CTTGCTGTTGCCGATCCAGGCCACCGAGGCGTCGACCAGGCTCTGCACCTCGCCGGTGGCCTTCATCACCTC
GGCGAAACCGGCCGCGGCGATCATGATGAAACCGATGGTGGCCATCATCTTCATGCCTTCGGTGAACAGGTC
GTCGGTCTCCTTCCAGCGCACCACGCCGGACAGCGAGAAGACCACGAAACCGACCAGCGCGCCGATGATCAT
CGAGTCCAGCCACAGCTGCACGACGAACGCGGCGACGATGGAGACCCCGGCCACCGCCAGGCTTTTCGGGCT
ATAGCTGACATCGACGCGTTCGGCCTGCTCGATCCGCTGCAAGTCGTAGACGCGCTTGCGGCGGTAGCTGAA
CAGCACCGCGATGAGCAACCCGGCGAGCATGCCCAGGGCCGGGATGAACATGGCGTGGGTGACGTTGATCCC
GCTGACGTCGACGCCGTTGCGCGCCACGTTGGCCAGCAGGATTTCATTGAGGAAGATGTTGCCGAAGCCCAC
CGGCAGGAACATGTACGGGGTGATGAGGCCGAAGGTGATGACGCAGGCGATCAATCGCCGGTCGATCTGCAG
CTTGCTCAGCACATAGAGCAGCGGCGGCACCAGCAGCGGGATGAAGGCGATGTGGATCGGCAGGATATTCTG
CGAGGATACCGCCACGCAGAGCAGCAGGCCGACCAGGATCCACTTGAACGCACCGGCGCCCTTGCCCTGCTC
GTCGTGCCGGCCGAGCAGCACCAGGACCTTGTCGGCCAGCGCATGGGCCACGCCGGAGCGAGCGATGGCCAC
GGCGAAGGCGCCGAGCATGGCGTACGACAGGGCCACCGTGGCGCCGCCGCCGAGGCCGCCGTTGAAGGCCTT
GAGAGTCCCCTCCAGGCCTAG

Translation:

MTPNKKRDSRFIGNPVGSLSGRPDIPSGDRPKWDSEQHRGGPAEHQQRQVVVQEGRHHGVPDVIVLAVDVEP
GGRPEGRVRRRRTCIPQRAGGADDADDGQRAEAQLHRQRDEDRGDDRHGGERRADAHGDQQADQQHQHGADR
LAVADPGHRGVDQALHLAGGLHHLGETGRGDHDETDGGHHLHAFGEQVVGLLPAHHAGQREDHETDQRADDH
RVQPQLHDERGDDGDPGHRQAFRAIADIDAFGLLDPLQVVDALAAVAEQHRDEQPGEHAQGRDEHGVGDVDP
ADVDAVARHVGQQDFIEEDVAEAHRQEHVRGDEAEGDDAGDQSPVDLQLAQHIEQRRHQQRDEGDVDRQDIL
RGYRHAEQQADQDPLERTGALALLVVPAEQHQDLVGQRMGHAGASDGHGEGAEHGVRQGHRGAAAEAAVEGL
ESPLQA*

AnnotationID:6126 GeneID:6125

AnnotatorUID: diggins

Modification Date/Time: 2005-03-07 14:02:27

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12121

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29369