ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6123

TrivialName: PA14_29810

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_29810

PAO1 Ortholog Locus:

Sequence Length: 1947

Protein Length: 648

Start: 2581963

Stop: 2583909

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC70262.1| (AP005031) putative translation initiation factor IF-2 [Streptomyces avermitilis MA-4680] Identities = 105/332 (31%), Positives = 120/332 (36%), Gaps = 31/332 (9%)

Sequence:

TTGCTTCCCACTGCCAGATGGATTGGACATGCTCGACACGAAACTGGAATCCCGGACTTTTCTCCTGTTGCT
GGCGGTGGTCACGCTCGCCTTCGGCTGGCTCTTGCTGCCGTTCTACGGCGCGGTGTTCTGGGGCACCATCCT
GGCGATCATCTTCGCCCCGGTGCAACGCCGCCTGCAGGTGCGTCTGAGGGATCGGAAGAACCTCGCCGCGCT
GATCACCCTGCTGATCTGCGTGCTGATCGTGATCATCCCGGTGATCTTCATCGCCGGTTCGCTGGTGCAGGA
AGGCGCGAGCGTCTACCAGCGGGTCAAGTCCGGCGAACTGAACTTCGCCGCCTACCTGCAGCAGGCGGTGGC
CGCCTTGCCGCCATCGGTGCACCAGTGGCTGGAGCGCTTCGACCTGGCCAATCTCTCGAGCCTGCAGGAGAA
GCTCTCCTCGGTGGCGATGCAGGCCAGCCAGGTGGTGGCGACCAAGGCGTTCAGCATCGGCCAGAACACCCT
CGACTTCGTCATCAGCTTCGGCATCATGCTCTACCTGCTGTTCTTCCTCCTTCGCGACGGTCGCGTGCTCGG
CCGGCGGATCAAGCAGGCGGTGCCGCTGAGCCAGGAACACAAGCACCACCTGTTCGCCAAGTTCACCACGGT
GATCCGCGCCACGGTGAAGGGCAACATCGCCGTGGCTGCCACCCAGGGCGCTCTCGGCGGCCTGATCTTCTG
GGTGCTGGGCATCGAGGGCGCCTTGCTCTGGGGCACCCTGATGGCCTTCCTGTCGCTGCTGCCGGCCATCGG
CGCGGCGCTGATCTGGGCGCCGGTGGCGGCCTATTTCCTGCTCACCGGGGCGATCTGGCAGGGCGTAGTGCT
GATCCTGTTCTGCGTGGTGGTGATCGGCCTGGTGGACAACATCCTGCGCCCGATCCTGGTCGGCAAGGACAC
CAAGATGCCGGACTACGTGGTGCTGATCTCCACCCTCGGCGGTATGGCCTTGTTCGGCCTCAACGGCTTCGT
CATCGGCCCGCTGATCGCCGCGCTGTTCATGGCCAGTTGGGACCTGTTCACTGGTCGCGAGGAAGAACCACA
GGCCTGAGTCGCGCCCGTGGCAGACAAGCCCCGCGAATGCGGGGCTTGTTCGTTTCAGGCCTTGAAGCATCA
TGGACGGCGCTGTCGTGGCTGAGCCGCTCCAGGCAGTGCCTGGGGCCTTCGGCTAACAGTGCGTCGAACCCG
GTACATCGCGACCGTTGCGCAACCGGACATGGAGCAGCGCTTGCCGGCACTCCTCAGGGCTCGCCGCTGTCA
ACCGGCGGCGGACCTCGGCTTGAGCGCGCAGGTGGCGAGGAAGGTCGGCATGAAGCGGTCGATGACGAAGCG
CGGGTGCGGTTGCCAGTCTTCGTAGAAATCCTGCAGCAGCAGGCCGGCGGCGAGCTGGCCGGCGATTTGCTG
GGTCAGGCTATGGCCGAACACCAGGGCTTCGCCTTTCTCGCGCTTCGCCGCGAGGGCTTCGGCGGAGAGGCT
TTCCAGGTCGGAGTAGGGCAGGCGATGTCGCGGCCGGATCAGGCCCTGCTCTGCCAGTTCCGGCGAGCGGTC
CTCGATGAACAGCGCCGGGTTGTAGAAGCTCGCCAGCAGCTTGCCGCCCGGCCGCAGCACCCGCGCGCATTC
GCGCCAGACCGGCAGGACATCGTCGACGTAGAGATTGGAGATGGGATTGAAGACCAGGTCGAAGGAGGCATC
GGCGAAGGTCGAGAGGTCGCGCATGTCGCCCTGCACGCAGGCCAGTTCGAGGCGGTCGCGGGCGGCGACCTG
GCGGTCCTTGTCCAGCTGTCCCGCCGAGGCGTCGAACAGCGTGACCCGTGCGCCGGCGGCGGCAAGGATCGG
CGCCTGCTGGCCGCCGGCCGAGGCCAGGCAGAGGATCTCGCGGCCGCGTACGTCGCCCAGCCAGTGAGCGGG
TAA

Translation:

MLPTARWIGHARHETGIPDFSPVAGGGHARLRLALAAVLRRGVLGHHPGDHLRPGATPPAGASEGSEEPRRA
DHPADLRADRDHPGDLHRRFAGAGRRERLPAGQVRRTELRRLPAAGGGRLAAIGAPVAGALRPGQSLEPAGE
ALLGGDAGQPGGGDQGVQHRPEHPRLRHQLRHHALPAVLPPSRRSRARPADQAGGAAEPGTQAPPVRQVHHG
DPRHGEGQHRRGCHPGRSRRPDLLGAGHRGRLALGHPDGLPVAAAGHRRGADLGAGGGLFPAHRGDLAGRSA
DPVLRGGDRPGGQHPAPDPGRQGHQDAGLRGADLHPRRYGLVRPQRLRHRPADRRAVHGQLGPVHWSRGRTT
GLSRARGRQAPRMRGLFVSGLEASWTALSWLSRSRQCLGPSANSASNPVHRDRCATGHGAALAGTPQGSPLS
TGGGPRLERAGGEEGRHEAVDDEARVRLPVFVEILQQQAGGELAGDLLGQAMAEHQGFAFLALRREGFGGEA
FQVGVGQAMSRPDQALLCQFRRAVLDEQRRVVEARQQLAARPQHPRAFAPDRQDIVDVEIGDGIEDQVEGGI
GEGREVAHVALHAGQFEAVAGGDLAVLVQLSRRGVEQRDPCAGGGKDRRLLAAGRGQAEDLAAAYVAQPVSG
*

AnnotationID:6124 GeneID:6123

AnnotatorUID: diggins

Modification Date/Time: 2005-03-07 14:02:13

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15945

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29365