ViewGene

Locus Name:
GeneID:
Location:

GeneID:6114
TrivialName: PA14_30170
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_30170
PAO1 Ortholog Locus:
Sequence Length:2244
Protein Length:747
Start: 2612515
Stop: 2614758
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGACGCCATCAGGCCAGGCTGTCGATCGCCGCGTTGAAGGTGGCGCTGGGGCGCATCACCTTGCTGGTCAG
CTCCGGGTTGGAGCGATAGTAGCCGCCGATCTCGGCCGGCTTGCCCTGGACCGCATTGAGTTCGGCGACGAT
GGTCGCTTCCTGCTCGGTCAGGGCCTTGGCCAGCGGCGCGAAGTGCGCTTTCAGCTCGGCGTCTTCGTCCTG
GGCGGCCAGGGCCTGGGCCCAGTACATCGCCAGGTAGAAGTGGCTGCCGCGGTTGTCGATGTCGCCGACCTT
GCGCGACGGCGACTTGTTGTTGTCCAGCAGCTTGCCGGTGGCTTCGTCCAGCGCCTTGCCGAGCAGCTTGGC
CTTGGCGTTGCCGGTCTTGATCCCGGTTTCCTCCAGGGACACGGCCAGGGCCAGGAACTCGCCCAGGGAGTC
CCAGCGCAGGTAGTTCTCTTCCACCAGTTGCTGGACGTGCTTGGGTGCCGAGCCGCCGGCGCCGGTTTCGTA
CATGCCGCCGCCCGCCATCAGCGGAACGATGGAGAGCATCTTGGCCGAGGTGCCCAGTTCCATGATCGGGAA
CAGGTCGGTCAGGTAGTCGCGCAGGACGTTGCCGGTCACCGAGATGGTGTCCTTGCCGCGGATCAGGCGTTC
CATGCTGACGCGAATGGCCTCGTTGTAGCCCATGATGCTGATGTCGAGGCCGGTCAGGTCGTGGTCCTTGAG
GTACAGCTCGACCTTCTTGCGCAGTTCGCGGTCGTGGGCGCGCTCCGGGTCCAGCCAGAAGATCGCCGGGGT
GTCGGACTGGCGCGCGCGGGTGACGGCCAGCTTGACCCAGTCGCGGATCGGCGCGTCCTTGGTCTGGCAGGC
GCGCCAGATGTCGCCTGTCTCCACCTCGTGCTGCATCAGCACGCTGCCGTCGGCCAGGACCACGCGCATGGT
GCCGTCGGCGGTCATTTCGAAGGTCTTGTCGTGGGAGCCGTATTCCTCGGCCTTCTGCGCCATCAGGCCGAC
GTTCGGCACGCTGCCCATGGTGGTCGGGTCGAAGGCGCCGTTGGTCTTGCAGAAGTTGATCATCTCCTGGTA
GATGCGGGCGTAGGTGCTTTCCGGCATTACCGCCTTGGTATCTTTCTGCTTGCCGTCCTTGCCCCACATCTG
GCCGGAGTTGCGGATCATCGCCGGCATCGAGGCGTCGACGATGACGTCGCTCGGAATGTGCAGGTTGGTGAT
GCCTTTCACGGAGTCGACCATCGCCATTTCCGGGCGGTGGCTGTACACCTCGTGGATGTCGTGGAGGATCTC
TTCCTGCTGGGAGGCGGGCAGCGACTTGATCTTGTCGTAGACGCTGGAGATACCGTTGTTCGGGTTCACGCC
GAGCTCTTCGAAGAGTTGGCCCCACTTGTCGAAGACGTCCTTGTAGTAGACGCTCACCGCATGCCCGAAGAC
GATCGGGTGGGAAATCTTCATCATGGTCGCCTTGACGTGCAGGGACCACATGACGCCGGTTTCCTTGCAGTC
CTGCAGGGTCTTCTCGAAGAAGTCGCGCAGCTTGCCGCAGCTCATGAACATGCTGTCGAGCACTTCGCCTTC
CTGCAGGCTCAGTTGCTTCTTGACCTCGACCTTGCCGTCCTTGCCGACGAACTCGATGCGCACGTCACCGGC
CTTGGCCATGGTGATGGACTGTTCGCTGGAGAAGAAGTCGCCGCCGCGCATGTAGTCGGCGTGGGAGCGGGA
GGCCATGCTCCACTTGCCCATGGAGTGCGGGTGCTTGCGGGCGTAGGCCTTCACCGCGGCAGGCGCGCGACG
GTCGGAGTTGCCTTCGCGCAGGACCGGGTTCACGGCGCTGCCGAGGATCTTCGCGTAGCGTGCGCGAACCTC
TTTCTCTTCGTCGGTCTGCGGGTCTTCCGGGAAGTCGGGAACCTTGTAGCCCAGGCCCTGCAGTTCGGCGAT
TGCGCCTTTCAGCTGGGGCACCGAGGCGCTGATGTTGGGCAGCTTGATGATATTGGCGTCGGGCGAGGTGGC
CAGGACCGCCAGGCGGGCGAGGTCGTCTTCGATACGCTGGTCGGCGTCGAGGCGGTCGGCGAAGTTGGCCAG
GATGCGTCCTGCAAGAGAGATGTCGCTGGTCTCGACGTCGATGCCGGCGGAAGCGGCAAAGGCCTTGACGAT
GGGGAGGAGCGAGTAGGTGGCGAGCGCGGGTGCTTCGTCGGTGAAGGTGTAGGTGATCTTCGAGCGGATGGA
CATCTACGGTAA
Translation:
MTPSGQAVDRRVEGGAGAHHLAGQLRVGAIVAADLGRLALDRIEFGDDGRFLLGQGLGQRREVRFQLGVFVL
GGQGLGPVHRQVEVAAAVVDVADLARRRLVVVQQLAGGFVQRLAEQLGLGVAGLDPGFLQGHGQGQELAQGV
PAQVVLFHQLLDVLGCRAAGAGFVHAAARHQRNDGEHLGRGAQFHDREQVGQVVAQDVAGHRDGVLAADQAF
HADANGLVVAHDADVEAGQVVVLEVQLDLLAQFAVVGALRVQPEDRRGVGLARAGDGQLDPVADRRVLGLAG
APDVACLHLVLHQHAAVGQDHAHGAVGGHFEGLVVGAVFLGLLRHQADVRHAAHGGRVEGAVGLAEVDHLLV
DAGVGAFRHYRLGIFLLAVLAPHLAGVADHRRHRGVDDDVARNVQVGDAFHGVDHRHFRAVAVHLVDVVEDL
FLLGGGQRLDLVVDAGDTVVRVHAELFEELAPLVEDVLVVDAHRMPEDDRVGNLHHGRLDVQGPHDAGFLAV
LQGLLEEVAQLAAAHEHAVEHFAFLQAQLLLDLDLAVLADELDAHVTGLGHGDGLFAGEEVAAAHVVGVGAG
GHAPLAHGVRVLAGVGLHRGRRATVGVAFAQDRVHGAAEDLRVACANLFLFVGLRVFREVGNLVAQALQFGD
CAFQLGHRGADVGQLDDIGVGRGGQDRQAGEVVFDTLVGVEAVGEVGQDASCKRDVAGLDVDAGGSGKGLDD
GEERVGGERGCFVGEGVGDLRADGHLR*
AnnotationID:6115GeneID:6114
AnnotatorUID: diggins
Modification Date/Time: 2005-03-07 13:01:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15933
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29347
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49116How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2341411Stop: 2339168
Length: 2244
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGACGCCATCAGGCCAGGCTGTCGATCGCCGCGTTGAAGGTGGCGCTGGGGCGCATCACCTTGCTGGTCAG
CTCCGGGTTGGAGCGATAGTAGCCGCCGATCTCGGCCGGCTTGCCCTGGACCGCATTGAGTTCGGCGACGAT
GGTCGCTTCCTGCTCGGTCAGGGCCTTGGCCAGCGGCGCGAAGTGCGCTTTCAGCTCGGCGTCTTCGTCCTG
GGCGGCCAGGGCCTGGGCCCAGTACATCGCCAGGTAGAAGTGGCTGCCGCGGTTGTCGATGTCGCCGACCTT
GCGCGACGGCGACTTGTTGTTGTCCAGCAGCTTGCCGGTGGCTTCGTCCAGCGCCTTGCCGAGCAGCTTGGC
CTTGGCGTTGCCGGTCTTGATCCCGGTTTCCTCCAGGGACACGGCCAGGGCCAGGAACTCGCCCAGGGAGTC
CCAGCGCAGGTAGTTCTCTTCCACCAGTTGCTGGACGTGCTTGGGTGCCGAGCCGCCGGCGCCGGTTTCGTA
CATGCCGCCGCCCGCCATCAGCGGAACGATGGAGAGCATCTTGGCCGAGGTGCCCAGTTCCATGATCGGGAA
CAGGTCGGTCAGGTAGTCGCGCAGGACGTTGCCGGTCACCGAGATGGTGTCCTTGCCGCGGATCAGGCGTTC
CATGCTGACGCGAATGGCCTCGTTGTAGCCCATGATGCTGATGTCGAGGCCGGTCAGGTCGTGGTCCTTGAG
GTACAGCTCGACCTTCTTGCGCAGTTCGCGGTCGTGGGCGCGCTCCGGGTCCAGCCAGAAGATCGCCGGGGT
GTCGGACTGGCGCGCGCGGGTGACGGCCAGCTTGACCCAGTCGCGGATCGGCGCGTCCTTGGTCTGGCAGGC
GCGCCAGATGTCGCCTGTCTCCACCTCGTGCTGCATCAGCACGCTGCCGTCGGCCAGGACCACGCGCATGGT
GCCGTCGGCGGTCATTTCGAAGGTCTTGTCGTGGGAGCCGTATTCCTCGGCCTTCTGCGCCATCAGGCCGAC
GTTCGGCACGCTGCCCATGGTGGTCGGGTCGAAGGCGCCGTTGGTCTTGCAGAAGTTGATCATCTCCTGGTA
GATGCGGGCGTAGGTGCTTTCCGGCATTACCGCCTTGGTATCTTTCTGCTTGCCGTCCTTGCCCCACATCTG
GCCGGAGTTGCGGATCATCGCCGGCATCGAGGCGTCGACGATGACGTCGCTCGGAATGTGCAGGTTGGTGAT
GCCTTTCACGGAGTCGACCATCGCCATTTCCGGGCGGTGGCTGTACACCTCGTGGATGTCGTGGAGGATCTC
TTCCTGCTGGGAGGCGGGCAGCGACTTGATCTTGTCGTAGACGCTGGAGATACCGTTGTTCGGGTTCACGCC
GAGCTCTTCGAAGAGTTGGCCCCACTTGTCGAAGACGTCCTTGTAGTAGACGCTCACCGCATGCCCGAAGAC
GATCGGGTGGGAAATCTTCATCATGGTCGCCTTGACGTGCAGGGACCACATGACGCCGGTTTCCTTGCAGTC
CTGCAGGGTCTTCTCGAAGAAGTCGCGCAGCTTGCCGCAGCTCATGAACATGCTGTCGAGCACTTCGCCTTC
CTGCAGGCTCAGTTGCTTCTTGACCTCGACCTTGCCGTCCTTGCCGACGAACTCGATGCGCACGTCACCGGC
CTTGGCCATGGTGATGGACTGTTCGCTGGAGAAGAAGTCGCCGCCGCGCATGTAGTCGGCGTGGGAGCGGGA
GGCCATGCTCCACTTGCCCATGGAGTGCGGGTGCTTGCGGGCGTAGGCCTTCACCGCGGCAGGCGCGCGACG
GTCGGAGTTGCCTTCGCGCAGGACCGGGTTCACGGCGCTGCCGAGGATCTTCGCGTAGCGTGCGCGAACCTC
TTTCTCTTCGTCGGTCTGCGGGTCTTCCGGGAAGTCGGGAACCTTGTAGCCCAGGCCCTGCAGTTCGGCGAT
TGCGCCTTTCAGCTGGGGCACCGAGGCGCTGATGTTGGGCAGCTTGATGATATTGGCGTCGGGCGAGGTGGC
CAGGACCGCCAGGCGGGCGAGGTCGTCTTCGATACGCTGGTCGGCGTCGAGGCGGTCGGCGAAGTTGGCCAG
GATGCGTCCTGCAAGAGAGATGTCGCTGGTCTCGACGTCGATGCCGGCGGAAGCGGCAAAGGCCTTGACGAT
GGGGAGGAGCGAGTAGGTGGCGAGCGCGGGTGCTTCGTCGGTGAAGGTGTAGGTGATCTTCGAGCGGATGGA
CATCTACGGTAA