ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6113

TrivialName: PA14_30220

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_30220

PAO1 Ortholog Locus:

Sequence Length: 2502

Protein Length: 833

Start: 2619545

Stop: 2617044

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAD00219.1| (U73653) 63 kDa protein [Mycobacterium bovis] Identities = 133/358 (37%), Positives = 164/358 (45%), Gaps = 29/358 (8%)

Sequence:

ATGCACCAGGCCGCCATGCTCGGCCAGCTCGCCGAACAGGATCTCCTCGGCCAACGGCCGCTTGATCTTGTC
CTGGATAAGCCGCGCCATCGGTCGCGCACCCATCTGCACGTCGTAGCCCTTCTCCGCCAGCCAGCCGCGCGC
CGCATCGCTGACCTCGAGCTGGACGCGCTTGTCCTCCAGCTGCGCCTGCAGCTCGGTGAGGAACTTGTCGAC
CACGCTCTTGATCGTCTCGGTGCTCAGGCGGCCGAACTGGATGATGGTATCCAGGCGGTTGCGGAACTCCGG
GGTGAAGCTCTTCTTGATCACTTCCATCGCATCGGTGGTGTGATCCTGCTGGTTGAAGCCGATCGACGCGCG
CGCCGCCACTTCCGCGCCGGCGTTGGTGGTCATGATCAGGATGATGTTGCGGAAGTCCGCCTTGCGCCCGTT
GTTGTCGGTCAGGGTGCCGTGGTCCATCACCTGCAGCAGCAGGTTGAAGACCTCCGGGTGAGCCTTCTCGAT
CTCGTCGAGCAGCAACACGCAGTGCGGGGTCTTGGTGATCGCCTCGGTGAGCAGGCCGCCCTGGTCGAAGCC
GACGTAGCCCGGAGGCGCACCGATCAGCCGCGACACGGTATGCCGCTCCATGTACTCGGACATGTCGAAGCG
CACCAGTTCCACGCCCAAGGCCTTCGCCAACTGCCGCGCCACTTCGGTCTTGCCCACGCCGGTGGGACCGGC
GAAGAGGAACGAGCCGACCGGCTTGTCCGGCGCCTTGAGCCCGGCCCGGGACAGCTTGATCGCGGTGGACAG
CGACTCGATGGCGTCGTCCTGGCCGAACACGGTCAGCTTGAGGTCGCGTTCGAGGTTGCGCAGCAACTCCTT
GTCCGAGGTGGTGACGTGTTTCGGCGGGATCCGCGCGATCTTCGCCACGATATCCTCGACCTGCGCCACCTC
GATGCGCTTCACGCGCTTCTCTTCCGGCTGCAGGCGCTGGTAGGCGCCCGCCTCGTCGATGACGTCGATGGC
CTTGTCCGGCATGTGCCGGTCGTTGATGTAGCGCGCCGCCAGCTCGGCCGCGGCGCGCAGCGCCTCGTCGCT
GTACTCGATGTGGTGATGCTGCTCGAAGCGCCCCTTGAGGCCCTTGAGGATGCCATAGGTGTCTTCCACCGA
CGGCTCGGTCACGTCGACCTTCTGGAAGCGCCGCGCCAAGGCCCGGTCCTTCTCGAAGATGCCGCGGAACTC
CTGGAAGGTGGTCGAGCCGATGCAGCGGATCTCGCCCGAGGACAGAACCGGCTTGAGCAGGTTGGAGGCGTC
CATTACCCCGCCGGATGCTGCACCGGCGCCGATGATGGTATGGATCTCGTCGATGAACAGCACCGCGTGCGG
GCGCTTGCGCAACTCGTTGAGCAAGGCCTTGAAGCGCTTCTCGAAGTCGCCGCGGTACTTGGTACCCGCGAG
CAAGGCACCCAGGTCGAGGGAGTAGACCACGCTGTCGGCCAGCAGGTCCGGCACCTGGCCATCGACGATGCG
CTTGGCCAGGCCTTCGGCGATGGCCGTCTTGCCGACCCCCGCCTCGCCTACCAGCAGCGGGTTGTTCTTGCG
CCGGCGGGCAAGGATCTGCGCCACCCGCTCGACTTCATGCTCACGCCCCACCAGCGGGTCGATCCGCCCCTG
GCGAGCCAGTTCGTTGAGGTTGCTGGCATAGGCGTCCAGCGGATGGTTGGACGTGGCCGACTCGCCACCTTC
CTCATCCTGCATATCCTGCTCCCCATCCTGCGGATGTTCGGCATGCCCGGGCACCTTGGAGATGCCGTGGGC
GATGTAGTTCACCACATCGATACGCGCGATGCTCTGCTGCTTGAGCAGGAACACCGCCTGGCTTTCCTGTTC
GCTGAAGATCGCCACCAGGACATTGGCCCCGGTCACTTCGCGCTTGCCGGAACTCTGCACGTGGAACACCGC
ACGCTGCAGGACGCGCTGGAAGCCCAGCGTCGGCTGGGTTTCGCGCTCGTCGTCGTGCTGCGGGATCAGCGG
CGTGGTGGAATCGATGAATTCCTGCAGGTCGCGCCGCAGCTTGTCCAGGTTGGCACCGCACGCACGCAATAC
CGTTGCCGCCGCCTCATTGTCCAGCAAGGCCAGCAGCAGGTGCTCAACCGTCATGAATTCATGGCGTTTGGC
CCTCGCCTCCTTGAAGGCGAGATTGAGGGTGACTTCGAGCTCTCGATTCAACATGGCTTCACCTCGCTCCCA
AACATCCGATCAACTGTCTTTCTCTATCTCGCAGAGCAATGGATGCTGGCTCTCCCGTGCATACTGATTGAC
CTGCATCGCCTTGGTTTCGGCCACGTCCCGGGTAAACAAGCCGCAGACCGCCTTACCCTGAGTATGTACCGT
CAACATGATCTTGGTGGCTTTTTCCCGGTCCATGTTGAAGAACACTTCCAGCACTTCAACAACAAAGTCCAT
CGGCGTGTAATCGTCGTTGAACAGTACCACCTTATACAACGGTGGCGGCTGTAA

Translation:

MHQAAMLGQLAEQDLLGQRPLDLVLDKPRHRSRTHLHVVALLRQPAARRIADLELDALVLQLRLQLGEELVD
HALDRLGAQAAELDDGIQAVAELRGEALLDHFHRIGGVILLVEADRRARRHFRAGVGGHDQDDVAEVRLAPV
VVGQGAVVHHLQQQVEDLRVSLLDLVEQQHAVRGLGDRLGEQAALVEADVARRRTDQPRHGMPLHVLGHVEA
HQFHAQGLRQLPRHFGLAHAGGTGEEERADRLVRRLEPGPGQLDRGGQRLDGVVLAEHGQLEVAFEVAQQLL
VRGGDVFRRDPRDLRHDILDLRHLDALHALLFRLQALVGARLVDDVDGLVRHVPVVDVARRQLGRGAQRLVA
VLDVVMLLEAPLEALEDAIGVFHRRLGHVDLLEAPRQGPVLLEDAAELLEGGRADAADLARGQNRLEQVGGV
HYPAGCCTGADDGMDLVDEQHRVRALAQLVEQGLEALLEVAAVLGTREQGTQVEGVDHAVGQQVRHLAIDDA
LGQAFGDGRLADPRLAYQQRVVLAPAGKDLRHPLDFMLTPHQRVDPPLASQFVEVAGIGVQRMVGRGRLATF
LILHILLPILRMFGMPGHLGDAVGDVVHHIDTRDALLLEQEHRLAFLFAEDRHQDIGPGHFALAGTLHVEHR
TLQDALEAQRRLGFALVVVLRDQRRGGIDEFLQVAPQLVQVGTARTQYRCRRLIVQQGQQQVLNRHEFMAFG
PRLLEGEIEGDFELSIQHGFTSLPNIRSTVFLYLAEQWMLALPCILIDLHRLGFGHVPGKQAADRLTLSMYR
QHDLGGFFPVHVEEHFQHFNNKVHRRVIVVEQYHLIQRWRL*

AnnotationID:6114 GeneID:6113

AnnotatorUID: diggins

Modification Date/Time: 2005-03-07 13:01:20

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12099

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29345