ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6111

TrivialName: PA14_30300

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_30300

PAO1 Ortholog Locus:

Sequence Length: 2139

Protein Length: 712

Start: 2627216

Stop: 2625078

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAB79300.1| (AB061860) putative sugar hydrolase [Streptomyces griseus] Identities = 81/325 (24%), Positives = 123/325 (37%), Gaps = 54/325 (16%)

Sequence:

ATGCTCTTTTCTCGTCTCGTGTCGGTTATCGGCGGTTCGTGGCCCGGTTGGCGCTTCGCCGGCCCCGGCGAC
GTCATCGACGCCGTCGCGGAAGCCTGGCTAGCTCCGCCGAGCCCATACCGCTCAGGATTTTCTGCGTTGGCG
GGGACTGGTGCGATCCAGCTCGGCCAGGTGTTCCAGCTTGTCGCGGATCTTCAGTTCCAGGCCCCTCGGCAC
CGGTTGATAGTAACGCCGCGGCTCCAGATCCTCGGGGAAATAATCCTCTCCGGCGGCATAGGCATCCGGCTC
GTCGTGGGCGTAGCGGTATTCCTCGCCATAGCCGAGGCTCTTCATCAATTTGGTCGGCGCGTTGCGCAAGTG
CAATGGCACTTCCCGCGAGCCGCTTTCGGCGACGTCGCGCATCGCCGCGTTGAACGCGCTGTACACCGCATT
GCTCTTCGGCGCACAGGCCAGGTAGACGATGGCCTGGGCCACCGCCAGCTCGCCTTCGGGGCTGCCCAGGCG
CTCCTGCACGTCCCAGGCCGACAGGCACAGGCCGAGGGCGCGAGGATCAGCATTGCCAACCTCCTCGCTGGC
CATGCGCACCACCCGCCGGGCGATGTACAGGGGATCGCAGCCGCCGTCGAGCATGCGCGCGAACCAATAGAG
TGCCGCATCGGGATTGGAGCCGCGCACCGACTTGTGCAGCGCGCTGATCTGGTCGTAGAACGCCTCGCCGCC
CTTGTCGAAACGTCGGCGGGTATCGCCGAGCAGATTCTGCAGCAGCTCGGGGCTGATCTCGCTGCCGTCCTC
GGCGAGGTCGGCAGCGTTCTCCAGCAGGTTCAGCAGGCGCCGCCCATCGCCGTCGGCGGCGGCCAGGAGAAC
CTGGAAGCTCTCCTCCGGCAGGCTCAGCTTGCGCTTGCCGAGGCCCTTGTCCTCGTTCAGCGCGCGGCCCAC
CAGCTTGCGCAGGGCGGCTTCGTCGAGGCTCTTGAGGACATACACGCGAGCCCGCGAGAGCAGCGCGTTGTT
CAACTCGAAGGACGGGTTCTCGGTGGTCGCGCCAATGAAGATCAGCGTGCCGTCTTCCACATAGGGCAGGAA
GGCATCCTGCTGGCTCTTGTTGAAGCGGTGCACCTCGTCGACGAACAGGATGGTCCGGCGCCCGTATTGCGC
CGCGTGCTGCTTGGCCACCTCGACCGCCTGGCGGATCTCCTTGACCCCGGACAGCACCGCGGAAATGGTCTC
GAAATGAGCGTCCGACACCTGCGCCAGCAGCCGCGCCAGGGTGGTCTTGCCGACTCCCGGCGGGCCCCAGAA
GATCATCGAGTGCAGCGCGCCCTGCTCCAGCGCCTCGCGCAAGGGCTTACCGCGGGCCAGCAGGTGTTCCTG
CCCCACGTACTCGTCCAGGTTTGCGGGCCTCAGCCGTGCCGCCAGGGGCTGCGCGACGGGCTCGCTGCGGAA
CAGATCCACGGCTTGCGCTTACTCCTGGATCACGTCGACGCCCGGCGGAACGTCGAAGGTGAATTGCTTGGC
ATCCAGCGCCTCGTTCATCTTCACGTCGAAGAACAGGATGTTGGTGCGCTGGCCGACGCCATCGATCATCTG
CATGTCGTTCACCTTGCCGCTGCGGAACGACAGGCGCAAGGTGTCGAAGAGGGTGTCCTTGGTCTTCGGCTT
GAGTACGAAATCGACTACGTTGCCGCCTTCCTTGTAGGTGATGGCGAAGCTTTCGCTGATCTTCGAGATGTC
GCCGGAGAGCAGCAGCGCCGGCGTCTGGGTCAGGCGCTGATCGAGCTTCTGGATGGTCACCTGCTCCAGGTC
CGGGTCGTACAGCCAGACCTTCTCGCCGTTGGAAATGAGCAATTGCTCGTTCGGCGCATCGGTATGCCAGCG
GAACAGTCCCGGCCGCTTCAGGCTGAGTTGGCCGGCGGTTTCCTGCAGGCGCGTGCCGCTACCGTCCAGGGT
CAGTTGGGAAAAACGCGCGGTCAGGGTCTGGGCCTTATTCAGCAGGCCGGTCAGGCGCTGGACAGCGGCGCT
GTCGTCGGCATGGGCCAGCGAAGCGCCCATGGCCAGGGCGGCAACGAACAACGTGCGGATCAGTCGCATCGG
AATCCTCTAAAACCTGTCGGGTTCAATCACGAACCGGCGCCGGCGCGATGA

Translation:

MLFSRLVSVIGGSWPGWRFAGPGDVIDAVAEAWLAPPSPYRSGFSALAGTGAIQLGQVFQLVADLQFQAPRH
RLIVTPRLQILGEIILSGGIGIRLVVGVAVFLAIAEALHQFGRRVAQVQWHFPRAAFGDVAHRRVERAVHRI
ALRRTGQVDDGLGHRQLAFGAAQALLHVPGRQAQAEGARISIANLLAGHAHHPPGDVQGIAAAVEHAREPIE
CRIGIGAAHRLVQRADLVVERLAALVETSAGIAEQILQQLGADLAAVLGEVGSVLQQVQQAPPIAVGGGQEN
LEALLRQAQLALAEALVLVQRAAHQLAQGGFVEALEDIHASPREQRVVQLEGRVLGGRANEDQRAVFHIGQE
GILLALVEAVHLVDEQDGPAPVLRRVLLGHLDRLADLLDPGQHRGNGLEMSVRHLRQQPRQGGLADSRRAPE
DHRVQRALLQRLAQGLTAGQQVFLPHVLVQVCGPQPCRQGLRDGLAAEQIHGLRLLLDHVDARRNVEGELLG
IQRLVHLHVEEQDVGALADAIDHLHVVHLAAAERQAQGVEEGVLGLRLEYEIDYVAAFLVGDGEAFADLRDV
AGEQQRRRLGQALIELLDGHLLQVRVVQPDLLAVGNEQLLVRRIGMPAEQSRPLQAELAGGFLQARAATVQG
QLGKTRGQGLGLIQQAGQALDSGAVVGMGQRSAHGQGGNEQRADQSHRNPLKPVGFNHEPAPAR*

AnnotationID:6112 GeneID:6111

AnnotatorUID: diggins

Modification Date/Time: 2005-03-07 11:11:38

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12096

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29341