ViewGene

Locus Name:
GeneID:
Location:

GeneID:6110
TrivialName: PA14_30480
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_30480
PAO1 Ortholog Locus:
Sequence Length:2022
Protein Length:673
Start: 2641115
Stop: 2639094
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGGATCAGGCCGTGGCGCGCCGGCGCTCGCGCTCGGCGACTTTGGCGCGGGTCAGCGGGATCAGCTCGCG
GCCATATTCCACGGCATCGGCGAGGGGATCGAAACCGCGAATGAGGATATTGCGCACGCCCAGGTCGTAGTA
GGCGAGCAGCGCGTCGGCCACCTGTTCCGCGGTACCGACCAGGGCGGTGGAGTTGTGCCCGCCACCGACCAG
CCTGGCGATTCCGGTCCAAAGGCGCTCGTCGAGGCGCTCGCCCTGCTCCACCGCCTTGAGCAGACGCTGGGC
GCCGACGCTCTGCGGCTTGCCCTTGGGGAAGCCGGCCTCGCCCAGGCGCGCGCCGGCGCTTGCGCGTATCGC
CTCGGCCTTGGCCCAGGCCTCGTCCTCCGTGCGCCCGAGGATGGGCCGGAACGACAGGCTGAATTCCACTTC
GCGACTATTCGAGCGCGCCTGTTCGCGCACAGCGGAGATGGTTTCGGCGGCCTGTGCCAGAGGTTCGCCCCA
GAGCATGAACACATCGGCCTGCTTGCCGGCGACCTTCAGCGCGGCTTCCGAGGAGCCGCCGAAATACACCGG
AATGTGCGGTTTCTGCTGTGGACGGATGGCCGAGAAGGCGTGCTCCACGCGGTAGTACGCGCCGTGGAAATC
GAAGGGTTCGGTGCTGGTCCAGGTGCGCTTGAGCAGTTCGATGAATTCGTCGCTGCGGGCATAGCGCTGGTC
GTGGTCGAGATAATCGCCGTCCTTGCGCTGGTCGGCGTCGCTGCCGCCGCTGATGATATGCACCGCCAGGCG
CCCGTCGAGGAGGTGTTCGAGGGTCGCCAGCTTGCGCGCGGCCAGGGTCGGGGCGACGAAACCGGGGCGGTG
CGCCAGCAGCAGACCGATCCGGGAAGTGGCCAGGCCAGCGGCGGCGGCCACCAGGAATCCATCCGGCTGGTC
CGACCAGTAGCCGACCAGGATTCGATCGAAGCCGGCCTCTTCGTGGGCGCGTGCGAAAGCGGCGATGTAAGG
CTTGTCGAGGATAGGTCCGACCGGCGCGAGGGTCTCCGAGGCCAGGCGATGGCCGATCATGCCGAGAAACTG
GATGCTCATGGTCCGTACTCAGTGGAAGGCTTCGTTGAAGGACGTGTCGATCACCGTGGAAGTGTCGAACGG
CTTGGGCAAGGCACCGGTCTGCAGCAGGAAATCCGCGGTCTCCTGGTAGTCGGTGGCGGCCTGGGCGTCTAC
CGGGCCGACGCTCATGCCGGCCTGGCCGATCCAATGGCGGGAGACTGCCCGGTCGAGATTGGCCTTCTGCGC
CCAGAGGTCGGCGTACTGCTCCTTGTGTGCTTCGACCCAGGCCCGTGCCTTGCGCAGGCGGCCGAGGAAGTC
GGCGATCTGCGCGCGCCTGGGCTCGATGGAAGCAGCGTTGGCGGCGATGCTGGACAGCCCCGGCATCAGGTC
GCGGGCGGTGAGAATCGGCCGTGCGCCGGAAACCACGATCTGCTGCGAGATATACGGCTCCCACACCGGAAA
GGCATCGATGCTGCCGCGCGGCAAGGCGGCGGCGGCGTCGATCGGCATCAGCTTGACGAACTCCACGTAGTC
CTTCGGCAAGCCGGCTTTCTCCAGCGCGCGCAAGGTCAGTTGCTGGCTCCAGGCACCGGGCCAGTAGGCGAC
TTTCCTGCCCTTGAGATCGGCAATGCTGCGCACCGGAGAATCCTTCGGCACCAGCAGGGCTATGGTATCGAG
GTTCTGCCGCGAGACGCCGACCAGCTTCACCGGCGCACCCTTGGCGGCGAGGAAGATGAAGCCCGAGTCGCC
GAGGAAACCCAGGTCCAGCGCTCCGGCCTGCAACCCTTCGGCCACCGGCGCGGCGGACTGGAAATGCTTCCA
TTCGACCTGGTAAGGCGCGCCTTCGAGAACTCCCGAGGCCTCCATGGAAGCCCGCACGTTGTAGTAGTTCTG
GTCGCCCACACGCAACGTCGGCAGGTCTGCGGCCTGGGCCAGGGAGGCACCGAGCAGAAGCGTGGCGAAGCT
GGTTAG
Translation:
MGSGRGAPALALGDFGAGQRDQLAAIFHGIGEGIETANEDIAHAQVVVGEQRVGHLFRGTDQGGGVVPATDQ
PGDSGPKALVEALALLHRLEQTLGADALRLALGEAGLAQARAGACAYRLGLGPGLVLRAPEDGPERQAEFHF
ATIRARLFAHSGDGFGGLCQRFAPEHEHIGLLAGDLQRGFRGAAEIHRNVRFLLWTDGREGVLHAVVRAVEI
EGFGAGPGALEQFDEFVAAGIALVVVEIIAVLALVGVAAAADDMHRQAPVEEVFEGRQLARGQGRGDETGAV
RQQQTDPGSGQASGGGHQESIRLVRPVADQDSIEAGLFVGACESGDVRLVEDRSDRREGLRGQAMADHAEKL
DAHGPYSVEGFVEGRVDHRGSVERLGQGTGLQQEIRGLLVVGGGLGVYRADAHAGLADPMAGDCPVEIGLLR
PEVGVLLLVCFDPGPCLAQAAEEVGDLRAPGLDGSSVGGDAGQPRHQVAGGENRPCAGNHDLLRDIRLPHRK
GIDAAARQGGGGVDRHQLDELHVVLRQAGFLQRAQGQLLAPGTGPVGDFPALEIGNAAHRRILRHQQGYGIE
VLPRDADQLHRRTLGGEEDEARVAEETQVQRSGLQPFGHRRGGLEMLPFDLVRRAFENSRGLHGSPHVVVVL
VAHTQRRQVCGLGQGGTEQKRGEAG*
AnnotationID:6111GeneID:6110
AnnotatorUID: diggins
Modification Date/Time: 2005-03-07 10:10:13
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12094
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29339
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49112How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2312811Stop: 2314832
Length: 2022
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGGATCAGGCCGTGGCGCGCCGGCGCTCGCGCTCGGCGACTTTGGCGCGGGTCAGCGGGATCAGCTCGCG
GCCATATTCCACGGCATCGGCGAGGGGATCGAAACCGCGAATGAGGATATTGCGCACGCCCAGGTCGTAGTA
GGCGAGCAGCGCGTCGGCCACCTGTTCCGCGGTACCGACCAGGGCGGTGGAGTTGTGCCCGCCACCGACCAG
CCTGGCGATTCCGGTCCAAAGGCGCTCGTCGAGGCGCTCGCCCTGCTCCACCGCCTTGAGCAGACGCTGGGC
GCCGACGCTCTGCGGCTTGCCCTTGGGGAAGCCGGCCTCGCCCAGGCGCGCGCCGGCGCTTGCGCGTATCGC
CTCGGCCTTGGCCCAGGCCTCGTCCTCCGTGCGCCCGAGGATGGGCCGGAACGACAGGCTGAATTCCACTTC
GCGACTATTCGAGCGCGCCTGTTCGCGCACAGCGGAGATGGTTTCGGCGGCCTGTGCCAGAGGTTCGCCCCA
GAGCATGAACACATCGGCCTGCTTGCCGGCGACCTTCAGCGCGGCTTCCGAGGAGCCGCCGAAATACACCGG
AATGTGCGGTTTCTGCTGTGGACGGATGGCCGAGAAGGCGTGCTCCACGCGGTAGTACGCGCCGTGGAAATC
GAAGGGTTCGGTGCTGGTCCAGGTGCGCTTGAGCAGTTCGATGAATTCGTCGCTGCGGGCATAGCGCTGGTC
GTGGTCGAGATAATCGCCGTCCTTGCGCTGGTCGGCGTCGCTGCCGCCGCTGATGATATGCACCGCCAGGCG
CCCGTCGAGGAGGTGTTCGAGGGTCGCCAGCTTGCGCGCGGCCAGGGTCGGGGCGACGAAACCGGGGCGGTG
CGCCAGCAGCAGACCGATCCGGGAAGTGGCCAGGCCAGCGGCGGCGGCCACCAGGAATCCATCCGGCTGGTC
CGACCAGTAGCCGACCAGGATTCGATCGAAGCCGGCCTCTTCGTGGGCGCGTGCGAAAGCGGCGATGTAAGG
CTTGTCGAGGATAGGTCCGACCGGCGCGAGGGTCTCCGAGGCCAGGCGATGGCCGATCATGCCGAGAAACTG
GATGCTCATGGTCCGTACTCAGTGGAAGGCTTCGTTGAAGGACGTGTCGATCACCGTGGAAGTGTCGAACGG
CTTGGGCAAGGCACCGGTCTGCAGCAGGAAATCCGCGGTCTCCTGGTAGTCGGTGGCGGCCTGGGCGTCTAC
CGGGCCGACGCTCATGCCGGCCTGGCCGATCCAATGGCGGGAGACTGCCCGGTCGAGATTGGCCTTCTGCGC
CCAGAGGTCGGCGTACTGCTCCTTGTGTGCTTCGACCCAGGCCCGTGCCTTGCGCAGGCGGCCGAGGAAGTC
GGCGATCTGCGCGCGCCTGGGCTCGATGGAAGCAGCGTTGGCGGCGATGCTGGACAGCCCCGGCATCAGGTC
GCGGGCGGTGAGAATCGGCCGTGCGCCGGAAACCACGATCTGCTGCGAGATATACGGCTCCCACACCGGAAA
GGCATCGATGCTGCCGCGCGGCAAGGCGGCGGCGGCGTCGATCGGCATCAGCTTGACGAACTCCACGTAGTC
CTTCGGCAAGCCGGCTTTCTCCAGCGCGCGCAAGGTCAGTTGCTGGCTCCAGGCACCGGGCCAGTAGGCGAC
TTTCCTGCCCTTGAGATCGGCAATGCTGCGCACCGGAGAATCCTTCGGCACCAGCAGGGCTATGGTATCGAG
GTTCTGCCGCGAGACGCCGACCAGCTTCACCGGCGCACCCTTGGCGGCGAGGAAGATGAAGCCCGAGTCGCC
GAGGAAACCCAGGTCCAGCGCTCCGGCCTGCAACCCTTCGGCCACCGGCGCGGCGGACTGGAAATGCTTCCA
TTCGACCTGGTAAGGCGCGCCTTCGAGAACTCCCGAGGCCTCCATGGAAGCCCGCACGTTGTAGTAGTTCTG
GTCGCCCACACGCAACGTCGGCAGGTCTGCGGCCTGGGCCAGGGAGGCACCGAGCAGAAGCGTGGCGAAGCT
GGTTAG