ViewGene

Locus Name:
GeneID:
Location:

GeneID:6055
TrivialName: PA14_31570
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_31570
PAO1 Ortholog Locus:
Sequence Length:1278
Protein Length:425
Start: 2745567
Stop: 2744290
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCACCTCGTCCGGACCGTCGGCCAGGCGCAGGGTGCGCTGCATGGCGTACCAGTAGGCCAGCGGGAAGTC
GTTGGAAACCCCGGCGCCACCGTGCATCTGGATCGCCCGGTCGATCACCTTCAACGCCACGTTGGGCGCCAC
CACCTTGATCTGGGCGATTTCGCTCTGGGCGATCTTGTTGCCCACGGTATCCATCATGTAGGCGGCCTGCAG
GGTCAGCAGGCGTGCCATGTTGATCTCCATCCGCGAGTCGGCGATGTGGTCGATGTTGCCGCCCAGGCGCGC
CAGCGGCTTGCCGAACGCGGTACGGCTGACCGCGCGCTTGCACATCAGTTCGAGGGCGCGCTCGGCCATGCC
GATGGAGCGCATGCAGTGGTGGATGCGGCCCGGGCCGAGGCGCCCCTGGGCGATCTCGAAACCGCGGCCCTC
GCCGAGGATGACGTTCTCGTAGGGCACCCGCACGTTCTCGAACAGCACTTCGGCATGGCCATGCGGCGCGTC
GTCGTAGCCGAACACCGGCAGCGGACGGAGGATCTTCACCCCGGGGGTGTCGACCGGTACCAGGATCATCGA
GTGCTGCTGGTGGCGCGGCGCGTCCGGGTTGGTCAGGCCCATGAAGATCAGGATCTTGCAGCGCGGATCGCA
GGCGCCGGAAGTCCACCACTTGCGCCCGTTGATCACCCAGTCGTTGCCCTGGCGCTCGGCGCGCGCCTCCAT
ATTGGTGGCGTCGGACGAGGCCACGCCCGGTTCGGTCATGGCGAAGGCCGAGCGGATCTCGCCGCTCAGCAG
CGGTTCCAGCCAGGTGCGCTTCTGCTCCTCGCTGCCGTAGCGCACCAGCACCTCCATGTTGCCGGTATCCGG
CGCGGCGCAGTTGAAGGGTTCCGGCCCGATCAGCGAACGGCCCATGATTTCCGCCAGCGGCGCGTATTCGTG
GTTGGCCAGCCCGGCACCATACTCGGACTCGGGCAGGAACAGGTTCCACAGCCCTTCGGCCTTGGCCTTGGC
CTTCAGCTCTTCCATGATCGCCGTCGGCTGCCAGCGGTCGCCCTCGGCGACCTGGCGCTCGAACACGGCCTC
GGCGGGATAGACATGCGCTTCCATGAACGCGCTGACACGTTCACGCAGCTCCTGGACCTTGGGGGAATAGGC
GAAATCCATGGGGGATACCTTCTGACGGGTTGGCAGGCGAGGCATCGGACAAAGGCGCTGGTAACGATGCCG
GAACAGGGCTTAAGATTTGCCCAGTCTATTTTTTCCGTCCATGAACATTCATGA
Translation:
MHLVRTVGQAQGALHGVPVGQREVVGNPGATVHLDRPVDHLQRHVGRHHLDLGDFALGDLVAHGIHHVGGLQ
GQQACHVDLHPRVGDVVDVAAQARQRLAERGTADRALAHQFEGALGHADGAHAVVDAARAEAPLGDLETAAL
AEDDVLVGHPHVLEQHFGMAMRRVVVAEHRQRTEDLHPGGVDRYQDHRVLLVARRVRVGQAHEDQDLAARIA
GAGSPPLAPVDHPVVALALGARLHIGGVGRGHARFGHGEGRADLAAQQRFQPGALLLLAAVAHQHLHVAGIR
RGAVEGFRPDQRTAHDFRQRRVFVVGQPGTILGLGQEQVPQPFGLGLGLQLFHDRRRLPAVALGDLALEHGL
GGIDMRFHERADTFTQLLDLGGIGEIHGGYLLTGWQARHRTKALVTMPEQGLRFAQSIFSVHEHS*
AnnotationID:6056GeneID:6055
AnnotatorUID: diggins
Modification Date/Time: 2005-03-06 22:10:04
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15897
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29231
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49057How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2208359Stop: 2209636
Length: 1278
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCACCTCGTCCGGACCGTCGGCCAGGCGCAGGGTGCGCTGCATGGCGTACCAGTAGGCCAGCGGGAAGTC
GTTGGAAACCCCGGCGCCACCGTGCATCTGGATCGCCCGGTCGATCACCTTCAACGCCACGTTGGGCGCCAC
CACCTTGATCTGGGCGATTTCGCTCTGGGCGATCTTGTTGCCCACGGTATCCATCATGTAGGCGGCCTGCAG
GGTCAGCAGGCGTGCCATGTTGATCTCCATCCGCGAGTCGGCGATGTGGTCGATGTTGCCGCCCAGGCGCGC
CAGCGGCTTGCCGAACGCGGTACGGCTGACCGCGCGCTTGCACATCAGTTCGAGGGCGCGCTCGGCCATGCC
GATGGAGCGCATGCAGTGGTGGATGCGGCCCGGGCCGAGGCGCCCCTGGGCGATCTCGAAACCGCGGCCCTC
GCCGAGGATGACGTTCTCGTAGGGCACCCGCACGTTCTCGAACAGCACTTCGGCATGGCCATGCGGCGCGTC
GTCGTAGCCGAACACCGGCAGCGGACGGAGGATCTTCACCCCGGGGGTGTCGACCGGTACCAGGATCATCGA
GTGCTGCTGGTGGCGCGGCGCGTCCGGGTTGGTCAGGCCCATGAAGATCAGGATCTTGCAGCGCGGATCGCA
GGCGCCGGAAGTCCACCACTTGCGCCCGTTGATCACCCAGTCGTTGCCCTGGCGCTCGGCGCGCGCCTCCAT
ATTGGTGGCGTCGGACGAGGCCACGCCCGGTTCGGTCATGGCGAAGGCCGAGCGGATCTCGCCGCTCAGCAG
CGGTTCCAGCCAGGTGCGCTTCTGCTCCTCGCTGCCGTAGCGCACCAGCACCTCCATGTTGCCGGTATCCGG
CGCGGCGCAGTTGAAGGGTTCCGGCCCGATCAGCGAACGGCCCATGATTTCCGCCAGCGGCGCGTATTCGTG
GTTGGCCAGCCCGGCACCATACTCGGACTCGGGCAGGAACAGGTTCCACAGCCCTTCGGCCTTGGCCTTGGC
CTTCAGCTCTTCCATGATCGCCGTCGGCTGCCAGCGGTCGCCCTCGGCGACCTGGCGCTCGAACACGGCCTC
GGCGGGATAGACATGCGCTTCCATGAACGCGCTGACACGTTCACGCAGCTCCTGGACCTTGGGGGAATAGGC
GAAATCCATGGGGGATACCTTCTGACGGGTTGGCAGGCGAGGCATCGGACAAAGGCGCTGGTAACGATGCCG
GAACAGGGCTTAAGATTTGCCCAGTCTATTTTTTCCGTCCATGAACATTCATGA