ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6049

TrivialName: PA14_31830

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_31830

PAO1 Ortholog Locus:

Sequence Length: 1482

Protein Length: 493

Start: 2770420

Stop: 2768939

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC70262.1| (AP005031) putative translation initiation factor IF-2 [Streptomyces avermitilis MA-4680] Identities = 101/312 (32%), Positives = 112/312 (35%), Gaps = 37/312 (11%)

Sequence:

ATGCCTCGCCGGCCTGCGTATTCAGCGATGTGGACGTATTCGGGGGAGACGCCTGATGCACCAGAGACAGCA
TTTCGAAGCCCTCGCCGAGGACCTGCGCCGGCATCTGGCCGAGGGCGAGGACTTCACCCTCTGGTACAGCGC
CGAGGACTCCGAGTTCATCCGCTTCAACCGGGCGCGGGTGCGCCAGGCCGGCCGGGTGCGCCAGGCCAGCGC
GCTGCTCCGGCTGATCCGCGACGAACGCCAGGCGAGCCTCGACCTGACGCTCTCCGGCGCGCCGGAAGAAGA
CCGCCAGCGTCTGGCCGAAGGCCTTCGGCAACTGCGCCAGAGCCTGGCCTGGATTCCCGCCGATCCCTATCT
GCTGCTCGACACCACGGCCTGGCAGCGAGAGAACCAGGACCTCAGCGCAGCGCCCGACAGCGGCGCGCTGCT
GGCCAGCCTCGAACGCCAGGCGCGCGACCTCGACCTGGTCGGCATCTATGCCGCCGGACCGCTGTTCCGTGG
CTTCGCCAACTCCTGGGGCGCCTTCGGCTGGCATGCCGGCAGCAGCTTCAACTTCGACTGGAGCCTGTTCCA
CGGCAACGGCCAGGCGGTGAAGGCCGACTACGCCGGCCAGCGCTGGGACGACGAAGCCTTCGCCCGGCGCTT
CGAACAGGCCCGGGAGCAGCTCGGCCACCTGGGCAAGCCGCTGCGCCAGTTGCGCCCCGGCGACTACCGCGC
CTACCTGGCGCCGGCGGCGCTCGAAGAAGTCATGCAGATGCTCTGCTGGGGCGGTTTATCCGCGCGCGCCCT
GGCTACCGGCGAAAGCCCCCTGCAACGCCTGCAGAACGGCGACGCCCTGCTCAGCCCGCTGCTGAACCTAGC
CGAGCGCCCTGCCACCTCGCCCTCCCCGGCATTCAGCGCGGAAGGCTCGCCGCGCGCCGAGGTCGAACTGGT
CGGCAACGGCCGCCTGAGCGGACGCCTGGTGAGTTCGCGCAGCGCCCGCGAATACGGCCTGGTAGCCAATGG
CGCCGGGGCCAACGAGGCGCCCACGGCGCTGGACATGGCCGGCGGCAGCCTGGAACAGGCGCGCATCCTCGA
GGCCCTGGATACCGGCCTGTACATCGGCAACCTGTGGTACCTGAACTACTCGGACATGCCCGCCGCGCGCCT
GACCGGAATGACCCGCTTCGCCACCTTCTGGGTGGAGAACGGCCAGATCCGGGCGCCGGTCAGCACCATGCG
CTTCGACGACAGCCTGTACAGCTTCCTCGGTGCCCACCTGGAAGACCTCAGCCACGAGCGCGAACTGCGCCT
GTCCAGCAATACCTACGGCGAACGCCAGACCGACTCGATGCACCTGCCGGGCGCGTTGACCGGGCGCTTCAC
CCTCACGCTCTGAGCCCGCGCGGCGCTCCCCGGCGGTTCGCCGCCCGGGAGCGCCGCGTGCGCAATCCGAAG
AACACCCGCCGATATTCTGGCGCCATTATCACGCCACCATAA

Translation:

MPRRPAYSAMWTYSGETPDAPETAFRSPRRGPAPASGRGRGLHPLVQRRGLRVHPLQPGAGAPGRPGAPGQR
AAPADPRRTPGEPRPDALRRAGRRPPASGRRPSATAPEPGLDSRRSLSAARHHGLAAREPGPQRSARQRRAA
GQPRTPGARPRPGRHLCRRTAVPWLRQLLGRLRLACRQQLQLRLEPVPRQRPGGEGRLRRPALGRRSLRPAL
RTGPGAARPPGQAAAPVAPRRLPRLPGAGGARRSHADALLGRFIRARPGYRRKPPATPAERRRPAQPAAEPS
RAPCHLALPGIQRGRLAARRGRTGRQRPPERTPGEFAQRPRIRPGSQWRRGQRGAHGAGHGRRQPGTGAHPR
GPGYRPVHRQPVVPELLGHARRAPDRNDPLRHLLGGERPDPGAGQHHALRRQPVQLPRCPPGRPQPRARTAP
VQQYLRRTPDRLDAPAGRVDRALHPHALSPRGAPRRFAARERRVRNPKNTRRYSGAIITPP*

AnnotationID:6050 GeneID:6049

AnnotatorUID: diggins

Modification Date/Time: 2004-07-07 14:02:46

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

no data found via CDD Search

Genomic Context:

Comment:

ReferenceID:11988

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29219