ViewGene
Locus Name:
GeneID:
Location:

GeneID:6037
TrivialName: PA14_32050
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32050
PAO1 Ortholog Locus:
Sequence Length:1149
Protein Length:382
Start: 2791100
Stop: 2789952
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGGCGAAACCGAAGTCCAGGGCCAGTTCGGTGAGGTTGCGTACCCGGCAGCCGGGGTCTTCCAGGCAGGC
GCGGATGCGCTCCAGGCGCAGCCGGCGAATGTATTGCCGAGGGCTCTCGCCAAGCTGGCGCTCGAACAGCGC
GTACAGCGAGCGAGTGCTCATGTGCGCCTGCTCGGCCAGCGCCGCGACCTCGATCTCGCTCTGCAGATGGCG
GCGGATGTAGGCATCGAGGCGGGCGAAGACGACCTGCGCATCGCCGGGGTCCTCGCGGCTGACGTTGGTCTT
CAGCAGGGTCAGCAGCTTGCTGCCGAGGATCTGCTCGAAGTGGCTGTCGACCCGCGCCAGCCGCTCGCCGGA
CTCGGCCTCGCGGCAGACCAGGGCGAGCAGGCCGACGAAGCCTTCCAGCTGGTCCAGGCGATAGCGATGCTC
GAGGAAACGCACGCCGCGTGCCGGATGGCTCCAGCGCTGCTCGGCGCAGATCGCTtCGAGCAGCGCGCAGGG
CAGCTTGACGATGAATTTCTCGCAGTCCGCCGAATAGGTCAGGTCGACCGGATCGTCCGGGTTGATCAGCAA
CAGCTCGCCCGGCGCCAGGGCGTGTTCCTGCCCGCCGCCGCACCACAGGCAGTGGCCGCGCAGGAGGATCTG
CAGGTGGAAGATGCTCTCCAGCGCCGGCGAGGTGACCCGTACCGCCGCGCCGTAGCTGATCCGGCACAGGTC
GAGGCTGGCGAAGGTGCGGTGGTCGAGGCTGGCTTGCGGCCTGCCGGCGGCCGGCAGGCGTATGCAGTGCGT
ACCAACGTGCCGGTTGACGTAGCCGGACACCGCATAGGGGTCGGCACGTTCGAACACCCGGCTGCGCTCGCT
GAGCAAGGAGGCATTCATGGGCAGGACACTCAGGCTGCTATCGTTGTTGTTATCGCCGCGCGGCGCCAAGCG
CCGGGCGCGGAACGTCCACCCACACTACGCAAGCCCCCCGCCGGCGACAATCTGGGCCGGCAATCGCGTGCG
GTAATCGAACGGAATCCGTCCAACGGCCAACGAAAAAGGGCCGTCAGGGTTTCCCCTGCCGGCCCGCTTGCG
CGCCCGCTTCAGCCGGCCGCCGGCGTCTCCTCGCGCGGACCGGCGTCACGCCCGTGGGTCCAGCGATAG
Translation:
MGETEVQGQFGEVAYPAAGVFQAGADALQAQPANVLPRALAKLALEQRVQRASAHVRLLGQRRDLDLALQMA
ADVGIEAGEDDLRIAGVLAADVGLQQGQQLAAEDLLEVAVDPRQPLAGLGLAADQGEQADEAFQLVQAIAML
EETHAACRMAPALLGADRFEQRAGQLDDEFLAVRRIGQVDRIVRVDQQQLARRQGVFLPAAAPQAVAAQEDL
QVEDALQRRRGDPYRRAVADPAQVEAGEGAVVEAGLRPAGGRQAYAVRTNVPVDVAGHRIGVGTFEHPAALA
EQGGIHGQDTQAAIVVVIAARRQAPGAERPPTLRKPPAGDNLGRQSRAVIERNPSNGQRKRAVRVSPAGPLA
RPLQPAAGVSSRGPASRPWVQR*
AnnotationID:6038GeneID:6037
AnnotatorUID: diggins
Modification Date/Time: 2005-03-06 18:06:35
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:15883




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29195




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49039How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2162824Stop: 2163972

          
Length: 1149


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGGGCGAAACCGAAGTCCAGGGCCAGTTCGGTGAGGTTGCGTACCCGGCAGCCGGGGTCTTCCAGGCAGGC 
GCGGATGCGCTCCAGGCGCAGCCGGCGAATGTATTGCCGAGGGCTCTCGCCAAGCTGGCGCTCGAACAGCGC 
GTACAGCGAGCGAGTGCTCATGTGCGCCTGCTCGGCCAGCGCCGCGACCTCGATCTCGCTCTGCAGATGGCG 
GCGGATGTAGGCATCGAGGCGGGCGAAGACGACCTGCGCATCGCCGGGGTCCTCGCGGCTGACGTTGGTCTT 
CAGCAGGGTCAGCAGCTTGCTGCCGAGGATCTGCTCGAAGTGGCTGTCGACCCGCGCCAGCCGCTCGCCGGA 
CTCGGCCTCGCGGCAGACCAGGGCGAGCAGGCCGACGAAGCCTTCCAGCTGGTCCAGGCGATAGCGATGCTC 
GAGGAAACGCACGCCGCGTGCCGGATGGCTCCAGCGCTGCTCGGCGCAGATCGCTtCGAGCAGCGCGCAGGG 
CAGCTTGACGATGAATTTCTCGCAGTCCGCCGAATAGGTCAGGTCGACCGGATCGTCCGGGTTGATCAGCAA 
CAGCTCGCCCGGCGCCAGGGCGTGTTCCTGCCCGCCGCCGCACCACAGGCAGTGGCCGCGCAGGAGGATCTG 
CAGGTGGAAGATGCTCTCCAGCGCCGGCGAGGTGACCCGTACCGCCGCGCCGTAGCTGATCCGGCACAGGTC 
GAGGCTGGCGAAGGTGCGGTGGTCGAGGCTGGCTTGCGGCCTGCCGGCGGCCGGCAGGCGTATGCAGTGCGT 
ACCAACGTGCCGGTTGACGTAGCCGGACACCGCATAGGGGTCGGCACGTTCGAACACCCGGCTGCGCTCGCT 
GAGCAAGGAGGCATTCATGGGCAGGACACTCAGGCTGCTATCGTTGTTGTTATCGCCGCGCGGCGCCAAGCG 
CCGGGCGCGGAACGTCCACCCACACTACGCAAGCCCCCCGCCGGCGACAATCTGGGCCGGCAATCGCGTGCG 
GTAATCGAACGGAATCCGTCCAACGGCCAACGAAAAAGGGCCGTCAGGGTTTCCCCTGCCGGCCCGCTTGCG 
CGCCCGCTTCAGCCGGCCGCCGGCGTCTCCTCGCGCGGACCGGCGTCACGCCCGTGGGTCCAGCGATAG