ViewGene

Locus Name:
GeneID:
Location:

GeneID:6031
TrivialName: PA14_32210
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32210
PAO1 Ortholog Locus:
Sequence Length:1233
Protein Length:410
Start: 2801242
Stop: 2800010
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCCAGGCCAGGCGGTCGAGGGTGACGAAGGCGTGGGCGGCGGCCAGGGTGCCGATGCCGCCCTCGAGCAT
GGTCCCGCCGTACAGGCCGATCCCGGCCGCCTCGGCGATCGCCGCGCTACGCAGCACCGCGCGCGGTCCGCC
GTTCTTGGCGATCTTCAGGGCGAACACCGGGGCGGCGCCCTCGCGAGCCAGGTGGAAGGCATCCTCGACGCT
CTCGATGGCCTCGTCGGCCATGATCGGCGCGCCGCCGCGGCTGCTCAGGCGCGCCAGGCCGATGCGGTTGTG
GCGGGCGATGGGCTGTTCGATCAGGGCGATGCCGTTGTCGCCGAGCGTCGCGCAGGCACGCTGGGCAACGCC
TTCGTCCCAGGCCTGGTTGACGTCCACCCGCACGCTGGCGCGCTCGCCAAGGGCGCGCTTGATGGCGATCGC
GTGGGCCACGTCGGCATCCACCTCACCGGCGCCGATCTTCAGCTTGAAGTGCCGGTGGCGGCGCAGGTCGAG
CATCCGCTCGGCTTCCTCGATGTCGCGGCCGGTGTCGCCGCTGGCCAGGGTCCAGGCCACCTCCAGGCTGTC
GTGCAGGCGGCCGCCGAGCAGTTCGCTGACGGCCAGGCCGAGGCGCTTGCCATGGGCGTCGAGCAAGGCGGT
CTCGACCGCCGAGCGGGCGAAGGTGTTGCCCCTGATGTGCCGGTCCAGGCGCTGCATCGCGGCATTCACGTT
GTCCGCCGGCTGGCCCAGCAGCAACGGGGCGAAATGCGCGTCGAGATTGCTCTTGATGCTCTCCGGGCTCTC
GCTGCCGTAGGCCAGGCCACCGATGGTGGTGGCTTCGCCGAGGCCCTCGATGCCGTCGCTGCAACGCAGGCG
GAGGATCACCAGGGTCTGCCGGTTCATGGTGTGCATGGCCAGCTTGTGCGGGCGGATGGTCGGCAGGTCGAC
GATGATCGACTCGAGGCTTTGGATCACGGCTTGGCTCATTCTCGGGGGTCCACCAGGGTTGCGGTCGGGTTT
TCGACGGTTCGCCGCTCAAGGCTCGCTCGATACCGAGCAGGTTTCGCCGTCGTTTCGGCCAAGCATCCATCg
cctTCTTCACTGGGGTCCAATATCATCTTCCTCTCGAACCATACCCTGGAGGTATCATGGAGCTTCGTCACC
TGCGCTACTTCCAGGCGCTGGCCCGGACCCTCAACTTCACCCGCGCCGCCGAGCAACTGCACATCGCCCAGC
CACCGCTGA
Translation:
MPGQAVEGDEGVGGGQGADAALEHGPAVQADPGRLGDRRATQHRARSAVLGDLQGEHRGGALASQVEGILDA
LDGLVGHDRRAAAAAQARQADAVVAGDGLFDQGDAVVAERRAGTLGNAFVPGLVDVHPHAGALAKGALDGDR
VGHVGIHLTGADLQLEVPVAAQVEHPLGFLDVAAGVAAGQGPGHLQAVVQAAAEQFADGQAEALAMGVEQGG
LDRRAGEGVAPDVPVQALHRGIHVVRRLAQQQRGEMRVEIALDALRALAAVGQATDGGGFAEALDAVAATQA
EDHQGLPVHGVHGQLVRADGRQVDDDRLEALDHGLAHSRGSTRVAVGFSTVRRSRLARYRAGFAVVSAKHPS
PSSLGSNIIFLSNHTLEVSWSFVTCATSRRWPGPSTSPAPPSNCTSPSHR*
AnnotationID:6032GeneID:6031
AnnotatorUID: diggins
Modification Date/Time: 2005-03-06 17:05:59
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15874
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29183
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49033How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2152682Stop: 2153914
Length: 1233
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCCAGGCCAGGCGGTCGAGGGTGACGAAGGCGTGGGCGGCGGCCAGGGTGCCGATGCCGCCCTCGAGCAT
GGTCCCGCCGTACAGGCCGATCCCGGCCGCCTCGGCGATCGCCGCGCTACGCAGCACCGCGCGCGGTCCGCC
GTTCTTGGCGATCTTCAGGGCGAACACCGGGGCGGCGCCCTCGCGAGCCAGGTGGAAGGCATCCTCGACGCT
CTCGATGGCCTCGTCGGCCATGATCGGCGCGCCGCCGCGGCTGCTCAGGCGCGCCAGGCCGATGCGGTTGTG
GCGGGCGATGGGCTGTTCGATCAGGGCGATGCCGTTGTCGCCGAGCGTCGCGCAGGCACGCTGGGCAACGCC
TTCGTCCCAGGCCTGGTTGACGTCCACCCGCACGCTGGCGCGCTCGCCAAGGGCGCGCTTGATGGCGATCGC
GTGGGCCACGTCGGCATCCACCTCACCGGCGCCGATCTTCAGCTTGAAGTGCCGGTGGCGGCGCAGGTCGAG
CATCCGCTCGGCTTCCTCGATGTCGCGGCCGGTGTCGCCGCTGGCCAGGGTCCAGGCCACCTCCAGGCTGTC
GTGCAGGCGGCCGCCGAGCAGTTCGCTGACGGCCAGGCCGAGGCGCTTGCCATGGGCGTCGAGCAAGGCGGT
CTCGACCGCCGAGCGGGCGAAGGTGTTGCCCCTGATGTGCCGGTCCAGGCGCTGCATCGCGGCATTCACGTT
GTCCGCCGGCTGGCCCAGCAGCAACGGGGCGAAATGCGCGTCGAGATTGCTCTTGATGCTCTCCGGGCTCTC
GCTGCCGTAGGCCAGGCCACCGATGGTGGTGGCTTCGCCGAGGCCCTCGATGCCGTCGCTGCAACGCAGGCG
GAGGATCACCAGGGTCTGCCGGTTCATGGTGTGCATGGCCAGCTTGTGCGGGCGGATGGTCGGCAGGTCGAC
GATGATCGACTCGAGGCTTTGGATCACGGCTTGGCTCATTCTCGGGGGTCCACCAGGGTTGCGGTCGGGTTT
TCGACGGTTCGCCGCTCAAGGCTCGCTCGATACCGAGCAGGTTTCGCCGTCGTTTCGGCCAAGCATCCATCg
cctTCTTCACTGGGGTCCAATATCATCTTCCTCTCGAACCATACCCTGGAGGTATCATGGAGCTTCGTCACC
TGCGCTACTTCCAGGCGCTGGCCCGGACCCTCAACTTCACCCGCGCCGCCGAGCAACTGCACATCGCCCAGC
CACCGCTGA