ViewGene

Locus Name:
GeneID:
Location:

GeneID:6029
TrivialName: PA14_32320
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32320
PAO1 Ortholog Locus:
Sequence Length:1356
Protein Length:451
Start: 2808648
Stop: 2810003
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAC46447.1| (AL591788) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Identities = 93/346 (26%), Positives = 124/346 (35%), Gaps = 59/346 (17%)
Sequence:
ATGGCGGGCGCGGAGGTCCGCCGCTCAGTCGCGCGTATCGCCCATGGCCCGGGCATAGCCGGACGGGGCGAA
GCGCAGGGTCACCAGCAACATCGCCACCACGCTCGCCGCGAGCAGCAGCCAGGAGGCCTGGAAGCTGCCGGT
GGCGTCGCGCAGCCAGCCGGTCAGGTAGGGCACGATGCCGGTGATGATGAAGCCGATGCCTTGCACGAAGGC
CGCCAGGCTTCCCGCCGCACGCGGCTCGTGGAGGTGGTCGAGGGTCAGGGTCAGGCTGAGGGCGAAGCAGGC
GCCCAGGCCGTAGCCGATCAACGCCACCCACAGCGCCGCGTGCTGCAGCGGCATCAGCAGCAGGCCGCAGAA
GCCGCCGAGCTGGACCAGCAGCGCGGCCAGCAGCCAGGGCCGGCGGTCGAGGCGGCGGCGAATCAGCAGCGG
CACGCTGAGCGCGGCGAGCACCTGGAAGATGGTCATGATCCCGACCAGCCCGCCGCTGTCCTGGGCGCTCCA
GCCGAGCTGGCGGTAGTACACCGGCAACCAGGCCACCATGCTGGTGTAGCCGCCGTTGATCAACCCGAAATA
CACCGCCAGCAGCCAGCCACGGCGATTGCCGAAGAAGTGCCGGACCGGCCCCTCGCCAGCGCTCGGCAGCAC
CTCCCTTGGCCGCGCGAACATCCACAGCAGCAGCGCCAGCAGGGCCGGTACGGCCCAGGCGCCGAGGCCGGC
CTGCCAGTTGGAGAAGTGTTCGGCGATCCGCGGGCTGAGCACCGCCGCGGTTCCGCCGCCGGCCATCAGCGA
GGCCGAGTAGAGGCCCATCGCCGCCGGGACCCGCCTCGGGAACCAGCGCTTGACCACGCCCGGTACCAGCGC
CTGGATGATCGCCACGCCGCTGCCGGCCAGCGCGGCACTGGCGATCAGCGCCAGCCCGCTATCCAGTTCCAG
GCGCCAGAGGCAGGCCGCGGCGATGGCCAGCAGTCCGCAGACGATGCCGCGGTGCTCGGCCAGCCAGCGCCC
GAGCCAGGGCAGGAACAGCGCCACCAGGCCCATGCAGAGCACCGGCAACACCGTCAGCAGCGACGCGCCCTG
GAAGCCGAGACCGGTGCCGGCGGTGATTTCCTCGAGCAGCGGGCCGATGCCGGTGAGGATCGGTCGCAGGTT
GATGCCAAGGCAGAAGATTACCAGCAGGCCGACCCAACTGACCTCCGCCGCGCCGACGCCGGTGGCGGCCTG
GCCGCCGGAAGGGATTCGCGCGCTCATGCCTGGCCTTGCCGCCATTGCCGGTACAGACCCTCTTCGCCGGCA
GGACGCAGGGCGCGTAGCGGCAGGCTCTGCCGCTGTGGCGGGCGCGCCATCTCGGCGTAG
Translation:
MAGAEVRRSVARIAHGPGIAGRGEAQGHQQHRHHARREQQPGGLEAAGGVAQPAGQVGHDAGDDEADALHEG
RQASRRTRLVEVVEGQGQAEGEAGAQAVADQRHPQRRVLQRHQQQAAEAAELDQQRGQQPGPAVEAAANQQR
HAERGEHLEDGHDPDQPAAVLGAPAELAVVHRQPGHHAGVAAVDQPEIHRQQPATAIAEEVPDRPLASARQH
LPWPREHPQQQRQQGRYGPGAEAGLPVGEVFGDPRAEHRRGSAAGHQRGRVEAHRRRDPPREPALDHARYQR
LDDRHAAAGQRGTGDQRQPAIQFQAPEAGRGDGQQSADDAAVLGQPAPEPGQEQRHQAHAEHRQHRQQRRAL
EAETGAGGDFLEQRADAGEDRSQVDAKAEDYQQADPTDLRRADAGGGLAAGRDSRAHAWPCRHCRYRPSSPA
GRRARSGRLCRCGGRAISA*
AnnotationID:6030GeneID:6029
AnnotatorUID: diggins
Modification Date/Time: 2005-03-06 16:04:54
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:11951
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29179
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49031How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2145276Stop: 2143921
Length: 1356
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGGGCGCGGAGGTCCGCCGCTCAGTCGCGCGTATCGCCCATGGCCCGGGCATAGCCGGACGGGGCGAA
GCGCAGGGTCACCAGCAACATCGCCACCACGCTCGCCGCGAGCAGCAGCCAGGAGGCCTGGAAGCTGCCGGT
GGCGTCGCGCAGCCAGCCGGTCAGGTAGGGCACGATGCCGGTGATGATGAAGCCGATGCCTTGCACGAAGGC
CGCCAGGCTTCCCGCCGCACGCGGCTCGTGGAGGTGGTCGAGGGTCAGGGTCAGGCTGAGGGCGAAGCAGGC
GCCCAGGCCGTAGCCGATCAACGCCACCCACAGCGCCGCGTGCTGCAGCGGCATCAGCAGCAGGCCGCAGAA
GCCGCCGAGCTGGACCAGCAGCGCGGCCAGCAGCCAGGGCCGGCGGTCGAGGCGGCGGCGAATCAGCAGCGG
CACGCTGAGCGCGGCGAGCACCTGGAAGATGGTCATGATCCCGACCAGCCCGCCGCTGTCCTGGGCGCTCCA
GCCGAGCTGGCGGTAGTACACCGGCAACCAGGCCACCATGCTGGTGTAGCCGCCGTTGATCAACCCGAAATA
CACCGCCAGCAGCCAGCCACGGCGATTGCCGAAGAAGTGCCGGACCGGCCCCTCGCCAGCGCTCGGCAGCAC
CTCCCTTGGCCGCGCGAACATCCACAGCAGCAGCGCCAGCAGGGCCGGTACGGCCCAGGCGCCGAGGCCGGC
CTGCCAGTTGGAGAAGTGTTCGGCGATCCGCGGGCTGAGCACCGCCGCGGTTCCGCCGCCGGCCATCAGCGA
GGCCGAGTAGAGGCCCATCGCCGCCGGGACCCGCCTCGGGAACCAGCGCTTGACCACGCCCGGTACCAGCGC
CTGGATGATCGCCACGCCGCTGCCGGCCAGCGCGGCACTGGCGATCAGCGCCAGCCCGCTATCCAGTTCCAG
GCGCCAGAGGCAGGCCGCGGCGATGGCCAGCAGTCCGCAGACGATGCCGCGGTGCTCGGCCAGCCAGCGCCC
GAGCCAGGGCAGGAACAGCGCCACCAGGCCCATGCAGAGCACCGGCAACACCGTCAGCAGCGACGCGCCCTG
GAAGCCGAGACCGGTGCCGGCGGTGATTTCCTCGAGCAGCGGGCCGATGCCGGTGAGGATCGGTCGCAGGTT
GATGCCAAGGCAGAAGATTACCAGCAGGCCGACCCAACTGACCTCCGCCGCGCCGACGCCGGTGGCGGCCTG
GCCGCCGGAAGGGATTCGCGCGCTCATGCCTGGCCTTGCCGCCATTGCCGGTACAGACCCTCTTCGCCGGCA
GGACGCAGGGCGCGTAGCGGCAGGCTCTGCCGCTGTGGCGGGCGCGCCATCTCGGCGTAG