ViewGene

Locus Name:
GeneID:
Location:

GeneID:6022
TrivialName: PA14_32730
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32730
PAO1 Ortholog Locus:
Sequence Length:2787
Protein Length:928
Start: 2844683
Stop: 2841897
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 157/550 (28%), Positives = 207/550 (37%), Gaps = 135/550 (24%)
Sequence:
ATGCCCGGCGCGTACGTTGCGCGCCGGGCTGCTTGGCCGGTACCGCGGCGCTGGCGCCGGGGCCCGGGTGGA
CGGTCAGAACTGGTAGTTCACCGTCGCGGTGACGTTGCGCTTCTCGCCGAAGTAGCAGAAGTCCAGGCTGTA
GCAGGACGCCACGTAGTCCTTGTCCAGCAGGTTGTTGGCATTGAGGCTGACGTCCAGGCCTTTCAGGCCGAG
CTTGCCGAGGTCGTAGCCGATCCGCGCGTCGACCAGGGTGTAGTCCGGCACCCGCAAGGTGTTTTCCTTGTC
CGCCCAGGTCTCGCCGACGTAGCGCGCGCCGCCGCCGATGCTCAGACCGCTGAGCGGGCCGGCGTCGAAGGC
ATAGTCGGCCCACAGCGATGCCATGTGCTTGGGCGCCTGGTTCGGCGTATGGCCCTGGTTGCCGTCCAGCGA
CTTGGTGTAGGTGATGTCGGTGTAGGTGTAGCTGCCGAGCAGCTTCAGGTTGTCGCTGAGCTGGGTATGGGC
CTCCAGTTCGAGCCCCTGGGAGCGCACTTCGCCGACCGAGGTGTAGAAGTTGTCCTGGGGCTCCTTGGAGGC
GACGTTTTCCTGGGTGATATGGAACAGCGAGGCGGTGTAGAAGCTGTTGCTGCCCGGCGCCTGGAACTTCAG
GCCGAGTTCCCACTGCTTGCCCTCGGTGGGCGCCAGGGGCGTGCCGGAGGCGTCGGAATAGGCGTTCGGGTT
GAACGACTCGGAGTAGCTGACGTAGGGCGCCAGGCCGTTGTCGAACAGGTACAGCGCGCCGATCCGCCCGGT
GAATTTCTCCCAGTCGTCGTCGGCCTTGCTGCCGGTGCTGCGGTTCTTGTCGGTGACGCTGACCCAGTCCTG
GCGCAGGCCGAGCGAGAAGCGCCACTGGTCGATGTCGATCAGGTCCTGGAGGTAGACGCCGGTCTGCTCCAG
GCGGCGGGTGTGGTTGTCGTCCGGGAAATAGCTGATGGCGTCGTCGCCGTAGACCGGGTTGAACGCGTCCAG
CGCCGAGGCCGAGCCGGAACGCCAGTCGACCACGGTGCGCCGGCGCTGATAGTCGAGGCCGGTGAGCAGGGT
GTGGCGCGCCGCGCCGGTGGCGAATTCGGCCTGCAGCATGTTGTCGACGATATACGCCTGCAGGTGCTCGCG
GGCGCCGCTGAAGTAGCGGTTCAGCTTGTTCGGCTCGCTGGCGCTCCAGCCGTAGGCGTAGACCTGCGACAA
GTCGACGTCGGAGTCCAGGTAGCGGAAGTTCTGCCGCGCCGACCAGACGTCGTCGATGCGGTGCTCCAGCTG
GTAGCCGAACATCCGCTGGGTGCGGTCGAAGTCGTCCTTGCTCGGCTCGCCATCGAAGAACTCGCGGGAGAT
GTGCCGGCCGTTGTGGTGCGACAGGGTGCCGTCGGCCGGTACGCCGCCGTGGTAGCCCCCGTTGGGATCGTG
TTGCAGGTAGCCTTGCAGGGTCAGGGTGGTGTCATCGCTGAAGTCGATGGCCAGGGTCGGGGCGATGGCGTA
GCGCTCCTCCTTGACGTGATCGAACTGGGTGTCCGAGCCCTTGCCGAGACCGACCAGGCGGTAGGCGATGCG
CTTCTCCTCGTCGAGCGGCCCGCTGAAATCGAAGCCCATCTCCTTCTGGCCCATGTTGCCGATGCTGCCGGT
GATCTGGCGGTAGTCCTCGTACAACGGCTTCTTGCTGGTCAGCGCCACCAGGCCGCCCGGCAGGCTACGGCC
GTAGAGCACCGAGGACGGGCCCTTGAGCACATCGATGCGTTCGAGGAAGTACGGGTCGACCTGCATCGAGCT
GAAGGTACCGCTGTCGCCCATGGCCTTGAGGCCGTCGAGGTAGATGTTGTCCACGCTGTTGTCGGCGAAGCC
GCGCATCACCACGTAGTCGTAGCGGTTGGAGGCGCCGACCTGGCCGGTGAAGATGCCGGGGGTATAGCGCAT
CGCCTGCTGCACGGTCTTGGAGGCGGTGTCGTCGATCTGCTCGCGGGTGATCACCGAGACGGTCTGGCTGGT
TTCCAGCAGCGGCTTGCTGGTCTTGGTGGCGATCTGGCTATGGGTGGCCAGGTAGCCATCGGTGCTGCCCAG
GTTGTTGCCGAGGGCGAAGACTTCCACCGCCTGCATGTTCAGCACGTCGCCGTCCTTTGCCGGCGCCTCGCG
CAAGACGAAGCTGCCGTCGCCCTGGTCTTCCGCTTCCAGCGGGGTGTCGGCGAGCAGCCGGGCCAGGCCCTG
CTGCACGGTGAAACTGCCGCGCAACCCCTGGGAGCTGTAGCCACCGGTCTGCGCCGGAGTGGCCGAGAGGGT
GATGCCGGCTTCGCGGGCGAAGCGGTTGAGCACGTCACCCAACTGTCCGGCGGGGATCGCATAGGGCCGCGC
CTGTTCCGCCGCCGCTTCGGCGGCCGAGGCGCAGAGCGGCGCCGCGCCGGCCGCCATGGCCAGCGACAGCAG
GGCCGCGCGCACCGAACGGCTCAGGCGCGAGGCGCGGGGGAAATCGAGGGACGACGGGGCATTGCGGAGGAC
GACGGCGGTGGCGGTCATGAACGGAATCCGTTGGAGTCGTTGAAGGGTGTTCAATCGATAAAGCCGGACCAG
TCGCGGAAAGCCGACAAAAATAATGAAAATAATTTTCAGTGCGTTTCGCTCCGGGCGGAAGCAAGCGTCCAC
GCGGCCGCCGGCGCGACTCAGGCGGCGACCACCCTCACCCACCAGCGGGTATGCCGCTGCAGGCGCACCGGC
AGGGTCCGCGCGAGCACCTGCAACAGCTTGTCGGTGTCGTCCAGGCGGTAG
Translation:
MPGAYVARRAAWPVPRRWRRGPGGRSELVVHRRGDVALLAEVAEVQAVAGRHVVLVQQVVGIEADVQAFQAE
LAEVVADPRVDQGVVRHPQGVFLVRPGLADVARAAADAQTAERAGVEGIVGPQRCHVLGRLVRRMALVAVQR
LGVGDVGVGVAAEQLQVVAELGMGLQFEPLGAHFADRGVEVVLGLLGGDVFLGDMEQRGGVEAVAARRLELQ
AEFPLLALGGRQGRAGGVGIGVRVERLGVADVGRQAVVEQVQRADPPGEFLPVVVGLAAGAAVLVGDADPVL
AQAEREAPLVDVDQVLEVDAGLLQAAGVVVVREIADGVVAVDRVERVQRRGRAGTPVDHGAPALIVEAGEQG
VARRAGGEFGLQHVVDDIRLQVLAGAAEVAVQLVRLAGAPAVGVDLRQVDVGVQVAEVLPRRPDVVDAVLQL
VAEHPLGAVEVVLARLAIEELAGDVPAVVVRQGAVGRYAAVVAPVGIVLQVALQGQGGVIAEVDGQGRGDGV
ALLLDVIELGVRALAETDQAVGDALLLVERPAEIEAHLLLAHVADAAGDLAVVLVQRLLAGQRHQAARQATA
VEHRGRALEHIDAFEEVRVDLHRAEGTAVAHGLEAVEVDVVHAVVGEAAHHHVVVAVGGADLAGEDAGGIAH
RLLHGLGGGVVDLLAGDHRDGLAGFQQRLAGLGGDLAMGGQVAIGAAQVVAEGEDFHRLHVQHVAVLCRRLA
QDEAAVALVFRFQRGVGEQPGQALLHGETAAQPLGAVATGLRRSGREGDAGFAGEAVEHVTQLSGGDRIGPR
LFRRRFGGRGAERRRAGRHGQRQQGRAHRTAQARGAGEIEGRRGIAEDDGGGGHERNPLESLKGVQSIKPDQ
SRKADKNNENNFQCVSLRAEASVHAAAGATQAATTLTHQRVCRCRRTGRVRASTCNSLSVSSRR*
AnnotationID:6023GeneID:6022
AnnotatorUID: danlee
Modification Date/Time: 2004-03-08 17:05:29
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:11938
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29165
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49024How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2109241Stop: 2112027
Length: 2787
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCCCGGCGCGTACGTTGCGCGCCGGGCTGCTTGGCCGGTACCGCGGCGCTGGCGCCGGGGCCCGGGTGGA
CGGTCAGAACTGGTAGTTCACCGTCGCGGTGACGTTGCGCTTCTCGCCGAAGTAGCAGAAGTCCAGGCTGTA
GCAGGACGCCACGTAGTCCTTGTCCAGCAGGTTGTTGGCATTGAGGCTGACGTCCAGGCCTTTCAGGCCGAG
CTTGCCGAGGTCGTAGCCGATCCGCGCGTCGACCAGGGTGTAGTCCGGCACCCGCAAGGTGTTTTCCTTGTC
CGCCCAGGTCTCGCCGACGTAGCGCGCGCCGCCGCCGATGCTCAGACCGCTGAGCGGGCCGGCGTCGAAGGC
ATAGTCGGCCCACAGCGATGCCATGTGCTTGGGCGCCTGGTTCGGCGTATGGCCCTGGTTGCCGTCCAGCGA
CTTGGTGTAGGTGATGTCGGTGTAGGTGTAGCTGCCGAGCAGCTTCAGGTTGTCGCTGAGCTGGGTATGGGC
CTCCAGTTCGAGCCCCTGGGAGCGCACTTCGCCGACCGAGGTGTAGAAGTTGTCCTGGGGCTCCTTGGAGGC
GACGTTTTCCTGGGTGATATGGAACAGCGAGGCGGTGTAGAAGCTGTTGCTGCCCGGCGCCTGGAACTTCAG
GCCGAGTTCCCACTGCTTGCCCTCGGTGGGCGCCAGGGGCGTGCCGGAGGCGTCGGAATAGGCGTTCGGGTT
GAACGACTCGGAGTAGCTGACGTAGGGCGCCAGGCCGTTGTCGAACAGGTACAGCGCGCCGATCCGCCCGGT
GAATTTCTCCCAGTCGTCGTCGGCCTTGCTGCCGGTGCTGCGGTTCTTGTCGGTGACGCTGACCCAGTCCTG
GCGCAGGCCGAGCGAGAAGCGCCACTGGTCGATGTCGATCAGGTCCTGGAGGTAGACGCCGGTCTGCTCCAG
GCGGCGGGTGTGGTTGTCGTCCGGGAAATAGCTGATGGCGTCGTCGCCGTAGACCGGGTTGAACGCGTCCAG
CGCCGAGGCCGAGCCGGAACGCCAGTCGACCACGGTGCGCCGGCGCTGATAGTCGAGGCCGGTGAGCAGGGT
GTGGCGCGCCGCGCCGGTGGCGAATTCGGCCTGCAGCATGTTGTCGACGATATACGCCTGCAGGTGCTCGCG
GGCGCCGCTGAAGTAGCGGTTCAGCTTGTTCGGCTCGCTGGCGCTCCAGCCGTAGGCGTAGACCTGCGACAA
GTCGACGTCGGAGTCCAGGTAGCGGAAGTTCTGCCGCGCCGACCAGACGTCGTCGATGCGGTGCTCCAGCTG
GTAGCCGAACATCCGCTGGGTGCGGTCGAAGTCGTCCTTGCTCGGCTCGCCATCGAAGAACTCGCGGGAGAT
GTGCCGGCCGTTGTGGTGCGACAGGGTGCCGTCGGCCGGTACGCCGCCGTGGTAGCCCCCGTTGGGATCGTG
TTGCAGGTAGCCTTGCAGGGTCAGGGTGGTGTCATCGCTGAAGTCGATGGCCAGGGTCGGGGCGATGGCGTA
GCGCTCCTCCTTGACGTGATCGAACTGGGTGTCCGAGCCCTTGCCGAGACCGACCAGGCGGTAGGCGATGCG
CTTCTCCTCGTCGAGCGGCCCGCTGAAATCGAAGCCCATCTCCTTCTGGCCCATGTTGCCGATGCTGCCGGT
GATCTGGCGGTAGTCCTCGTACAACGGCTTCTTGCTGGTCAGCGCCACCAGGCCGCCCGGCAGGCTACGGCC
GTAGAGCACCGAGGACGGGCCCTTGAGCACATCGATGCGTTCGAGGAAGTACGGGTCGACCTGCATCGAGCT
GAAGGTACCGCTGTCGCCCATGGCCTTGAGGCCGTCGAGGTAGATGTTGTCCACGCTGTTGTCGGCGAAGCC
GCGCATCACCACGTAGTCGTAGCGGTTGGAGGCGCCGACCTGGCCGGTGAAGATGCCGGGGGTATAGCGCAT
CGCCTGCTGCACGGTCTTGGAGGCGGTGTCGTCGATCTGCTCGCGGGTGATCACCGAGACGGTCTGGCTGGT
TTCCAGCAGCGGCTTGCTGGTCTTGGTGGCGATCTGGCTATGGGTGGCCAGGTAGCCATCGGTGCTGCCCAG
GTTGTTGCCGAGGGCGAAGACTTCCACCGCCTGCATGTTCAGCACGTCGCCGTCCTTTGCCGGCGCCTCGCG
CAAGACGAAGCTGCCGTCGCCCTGGTCTTCCGCTTCCAGCGGGGTGTCGGCGAGCAGCCGGGCCAGGCCCTG
CTGCACGGTGAAACTGCCGCGCAACCCCTGGGAGCTGTAGCCACCGGTCTGCGCCGGAGTGGCCGAGAGGGT
GATGCCGGCTTCGCGGGCGAAGCGGTTGAGCACGTCACCCAACTGTCCGGCGGGGATCGCATAGGGCCGCGC
CTGTTCCGCCGCCGCTTCGGCGGCCGAGGCGCAGAGCGGCGCCGCGCCGGCCGCCATGGCCAGCGACAGCAG
GGCCGCGCGCACCGAACGGCTCAGGCGCGAGGCGCGGGGGAAATCGAGGGACGACGGGGCATTGCGGAGGAC
GACGGCGGTGGCGGTCATGAACGGAATCCGTTGGAGTCGTTGAAGGGTGTTCAATCGATAAAGCCGGACCAG
TCGCGGAAAGCCGACAAAAATAATGAAAATAATTTTCAGTGCGTTTCGCTCCGGGCGGAAGCAAGCGTCCAC
GCGGCCGCCGGCGCGACTCAGGCGGCGACCACCCTCACCCACCAGCGGGTATGCCGCTGCAGGCGCACCGGC
AGGGTCCGCGCGAGCACCTGCAACAGCTTGTCGGTGTCGTCCAGGCGGTAG