ViewGene

Locus Name:
GeneID:
Location:

GeneID:6021
TrivialName: PA14_32760
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 15:03:15
LocusName:PA14_32760
PAO1 Ortholog Locus:
Sequence Length:1293
Protein Length:430
Start: 2846210
Stop: 2844918
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: emb|CAB76073.1| (AL939109) putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase [Streptomyces coelicolor A3(2)]
Identities = 79/286 (27%), Positives = 108/286 (37%), Gaps = 39/286 (13%)
Sequence:
GTGACGGCCAGTTGCTGGTCGCGCGGCTCGGTCTTGAGCACTTCGACCTGGCCGATCTCGGCGAAGCCGGCG
TTGTCGGAGACCACCTTGGCGCCATCAGCGCCCTGGGCCGACTGGCGGCCGCTGGTGATGCCCTCGCTGACC
CCGCCGAGGAGGTTCTTGCCGGTCTCGATGGCCGAGGACACCGCGGCCTTGGCCGCATCCTTGACCGAGCTG
CCCTCCTCCGTGGCCACGGCGCTGCCGGCGGCCAGGGGCAGGAGCAGTCCCAATGCGGCGATCCTTGCGTTC
ATTCGTCCATCCTCTGGTGGTGTGGGAGGCAGCCAGACTAACAGCCGGCTAGCGGCCGTTCCAGTGGCGCGC
CCGGCGCTTGCGCCACCAGATGTAGACACCGGTCAGCGACAGCCCGGCGATGGCCAGGCCGAGGGCGGCGAT
GGCGATGCGTCCCGGCAGGCCGGCGATGCGCCCGCCGTGGATCGGGTACTGCAAGCGGTAGAAACGCTCTCC
CCAACTGCCCTGCCCGGCGACTTCCTGGCCGAGCAGGCGGCCGTCGCTGCCGTGGAAGAACAGCCAGGACTT
GCCCATGGGGTCGTCGTGGTCGCCGAAGCCGGCGCCGAAGAAGTTGTATTCGAAGCTGTAGTACAGCTCGCC
AATCGGCTCGGCGATGCCCAGCCGCGCCGCTTCGACGCTGGCCAACTGGAAGGTGCGGTCGTAGTCCAGGCG
GGTCTCCCCCAGTTGCTCCCTGGGCAGCCGCCCGCGCGCCTCGTAGACGCTCGGTTCGATCGGCGAGAACAG
CGATACCAGCGGCTTGAACACCTGGCTCGGCAGGTTCAGGGCGACGCTGCTCAGCGCCACCGGCGCCAGCAG
CAGCCAGAGCCAGAGGCCGCCGGCGCGATGCAGGTCGAAGTTGAAGCGGTAGGCGTTGCCGCGCTTGATCTT
CCAGGCGGTCGCCCACTTGCTCCAGAACGGCCGGCCGCGCGGCAGGGTCAGCCAGGCGCCGACGAAGCAGTC
GAGGAACCAGAACATCGCCACCCCGCCCATCAGGTACAGGCCCCAGTTCCCCGGCAGGGTCAGGTTGTGGTG
GAACTCCAGGACCCAGGGAACCAGGTTCGCCGGCTGGAAGCAGCAGGCCGCCCAGAGGCGCTTGCCGACTTC
CTCGCCGCTGACCGGGTCGAGGTAGAACACGTCGTGCTCGACCTTGGCGCCGGCCTCGCGCGGCACGGTGGC
GAGCAACGCCGGGTGCCCGCCCGCCTCGGGATACTCCATGTACCACACCAGTTGTCGCGGATAGCGTGA
Translation:
MTASCWSRGSVLSTSTWPISAKPALSETTLAPSAPWADWRPLVMPSLTPPRRFLPVSMAEDTAALAASLTEL
PSSVATALPAARGRSSPNAAILAFIRPSSGGVGGSQTNSRLAAVPVARPALAPPDVDTGQRQPGDGQAEGGD
GDASRQAGDAPAVDRVLQAVETLSPTALPGDFLAEQAAVAAVEEQPGLAHGVVVVAEAGAEEVVFEAVVQLA
NRLGDAQPRRFDAGQLEGAVVVQAGLPQLLPGQPPARLVDARFDRREQRYQRLEHLARQVQGDAAQRHRRQQ
QPEPEAAGAMQVEVEAVGVAALDLPGGRPLAPERPAARQGQPGADEAVEEPEHRHPAHQVQAPVPRQGQVVV
ELQDPGNQVRRLEAAGRPEALADFLAADRVEVEHVVLDLGAGLARHGGEQRRVPARLGILHVPHQLSRIA*
AnnotationID:6022GeneID:6021
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 15:03:45
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15870
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29163
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49023How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2107714Stop: 2109006
Length: 1293
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGACGGCCAGTTGCTGGTCGCGCGGCTCGGTCTTGAGCACTTCGACCTGGCCGATCTCGGCGAAGCCGGCG
TTGTCGGAGACCACCTTGGCGCCATCAGCGCCCTGGGCCGACTGGCGGCCGCTGGTGATGCCCTCGCTGACC
CCGCCGAGGAGGTTCTTGCCGGTCTCGATGGCCGAGGACACCGCGGCCTTGGCCGCATCCTTGACCGAGCTG
CCCTCCTCCGTGGCCACGGCGCTGCCGGCGGCCAGGGGCAGGAGCAGTCCCAATGCGGCGATCCTTGCGTTC
ATTCGTCCATCCTCTGGTGGTGTGGGAGGCAGCCAGACTAACAGCCGGCTAGCGGCCGTTCCAGTGGCGCGC
CCGGCGCTTGCGCCACCAGATGTAGACACCGGTCAGCGACAGCCCGGCGATGGCCAGGCCGAGGGCGGCGAT
GGCGATGCGTCCCGGCAGGCCGGCGATGCGCCCGCCGTGGATCGGGTACTGCAAGCGGTAGAAACGCTCTCC
CCAACTGCCCTGCCCGGCGACTTCCTGGCCGAGCAGGCGGCCGTCGCTGCCGTGGAAGAACAGCCAGGACTT
GCCCATGGGGTCGTCGTGGTCGCCGAAGCCGGCGCCGAAGAAGTTGTATTCGAAGCTGTAGTACAGCTCGCC
AATCGGCTCGGCGATGCCCAGCCGCGCCGCTTCGACGCTGGCCAACTGGAAGGTGCGGTCGTAGTCCAGGCG
GGTCTCCCCCAGTTGCTCCCTGGGCAGCCGCCCGCGCGCCTCGTAGACGCTCGGTTCGATCGGCGAGAACAG
CGATACCAGCGGCTTGAACACCTGGCTCGGCAGGTTCAGGGCGACGCTGCTCAGCGCCACCGGCGCCAGCAG
CAGCCAGAGCCAGAGGCCGCCGGCGCGATGCAGGTCGAAGTTGAAGCGGTAGGCGTTGCCGCGCTTGATCTT
CCAGGCGGTCGCCCACTTGCTCCAGAACGGCCGGCCGCGCGGCAGGGTCAGCCAGGCGCCGACGAAGCAGTC
GAGGAACCAGAACATCGCCACCCCGCCCATCAGGTACAGGCCCCAGTTCCCCGGCAGGGTCAGGTTGTGGTG
GAACTCCAGGACCCAGGGAACCAGGTTCGCCGGCTGGAAGCAGCAGGCCGCCCAGAGGCGCTTGCCGACTTC
CTCGCCGCTGACCGGGTCGAGGTAGAACACGTCGTGCTCGACCTTGGCGCCGGCCTCGCGCGGCACGGTGGC
GAGCAACGCCGGGTGCCCGCCCGCCTCGGGATACTCCATGTACCACACCAGTTGTCGCGGATAGCGTGA