ViewGene
Locus Name:
GeneID:
Location:

GeneID:6019
TrivialName: PA14_32800
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32800
PAO1 Ortholog Locus:
Sequence Length:591
Protein Length:196
Start: 2863621
Stop: 2863031
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCCAACCGGCATCCTCGTAAGCCTGGGTCAAGAATGCGGCGCGCTCCTCCAGCCCCTTCAGGTAGTTATC
GCCAAACTGCTGCCGGAACTCTGGCGAAGTGGCCAACTGCTCCAGAGCTGCGTAGGTTTCCCTCCAGTTCTT
GACCAGCTCATAAACACCCACTGCGGTTTCAGCTGTCGAAAGACCGATGCCTCCTCCAACACCTACGACGAT
ACCGACATCCTGCTGGGCCGAAATAATTGCCCATTTGGCTTCTATTCCGGTTTTGCAGAGCGGTTTGTCCTT
GCAGCCATCGACCTCCTGCCGCTTCTTCTCCTCCTGCCAATGACTGAGGTAGTTGTGTTGGGTGGCATTCCC
CGCCACCCAGGCTCCTGTCTGCAAGCTCTTGGCGTCCGCATCGCCCTGCGTCGAAGCCGCCAGCACGCCGAT
CAACTGCGAACTCATGATCAGCAGGCCCTTCTTGTCATCGATGGGCAGGCTGGCGTATTGCTTGGCGAGGCT
ATCCACCAGCGCCTCGTTGACTCCCGCAGCCAGGGCTCCGGTACGGAAATCGCCACCGACCGCTTCGGCGGC
CAGACCTCCCATTAG
Translation:
MPTGILVSLGQECGALLQPLQVVIAKLLPELWRSGQLLQSCVGFPPVLDQLINTHCGFSCRKTDASSNTYDD
TDILLGRNNCPFGFYSGFAERFVLAAIDLLPLLLLLPMTEVVVLGGIPRHPGSCLQALGVRIALRRSRQHAD
QLRTHDQQALLVIDGQAGVLLGEAIHQRLVDSRSQGSGTEIATDRFGGQTSH*
AnnotationID:6020GeneID:6019
AnnotatorUID: danlee
Modification Date/Time: 2006-02-09 17:05:39
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:15868




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29159




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49021How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2090303Stop: 2090893

          
Length: 591


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCCAACCGGCATCCTCGTAAGCCTGGGTCAAGAATGCGGCGCGCTCCTCCAGCCCCTTCAGGTAGTTATC 
GCCAAACTGCTGCCGGAACTCTGGCGAAGTGGCCAACTGCTCCAGAGCTGCGTAGGTTTCCCTCCAGTTCTT 
GACCAGCTCATAAACACCCACTGCGGTTTCAGCTGTCGAAAGACCGATGCCTCCTCCAACACCTACGACGAT 
ACCGACATCCTGCTGGGCCGAAATAATTGCCCATTTGGCTTCTATTCCGGTTTTGCAGAGCGGTTTGTCCTT 
GCAGCCATCGACCTCCTGCCGCTTCTTCTCCTCCTGCCAATGACTGAGGTAGTTGTGTTGGGTGGCATTCCC 
CGCCACCCAGGCTCCTGTCTGCAAGCTCTTGGCGTCCGCATCGCCCTGCGTCGAAGCCGCCAGCACGCCGAT 
CAACTGCGAACTCATGATCAGCAGGCCCTTCTTGTCATCGATGGGCAGGCTGGCGTATTGCTTGGCGAGGCT 
ATCCACCAGCGCCTCGTTGACTCCCGCAGCCAGGGCTCCGGTACGGAAATCGCCACCGACCGCTTCGGCGGC 
CAGACCTCCCATTAG