ViewGene
Locus Name:
GeneID:
Location:

GeneID:6016
TrivialName: PA14_32870
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32870
PAO1 Ortholog Locus:
Sequence Length:630
Protein Length:209
Start: 2876560
Stop: 2877189
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGAACATCCTCCGGCTCCAACCGATACAACTCCTCATCCGGTTCCATGCACAGCCGGCATCCGAGTCTCGT
ATAAAAATCCACCGTGTTCTGCGACGGCGTAGCCGAAACGTAGAGCGCGCTGGCGCCGAGGTGGCGGGCCTG
GGTGGCGGCGAGGTGGAAGAGGTGGGCGCCGAGGCTGCGGCGGCGGTAGGCGTGGCTGAGGTGGAGAAACTT
CAGTTGCAGCCAGTCGCGCTCGGGGCCGAGGCGGCGCGGGTcgaGGACTACCGCGCCGATCAGGTGGCCCTG
GTCGAACAGGCCGAGGAACCAGCCGCCGCGGTCGAAGCAGTCGAGCAGGATCGGCGTGTAGTGCTCGGCCTC
GCCCTCCGGCCAGCCGCGCATGTCGTAGAACTCGGGGCGCAGCACCAGTTGGCCGGCCTCGACGGAATACAG
GTGCTCGATCACTTCGCTGCGGTCGATCTCCCAGACCAGGGGGATTTCGTCGCGGCGCAGCAGGCGTTCTTC
GGTCATCGTGGTTTCCTTGCGCTAAGGCCGTACATCAGCGGCAGGCGCGGACGATCGGCGGGCGGCAGCATG
CGTCCGCCGCCGCCGTCGCGCATGCCGTCGAAGCCGGCCCAGCCGTTGGCGTAG
Translation:
MNILRLQPIQLLIRFHAQPASESRIKIHRVLRRRSRNVERAGAEVAGLGGGEVEEVGAEAAAAVGVAEVEKL
QLQPVALGAEAARVEDYRADQVALVEQAEEPAAAVEAVEQDRRVVLGLALRPAAHVVELGAQHQLAGLDGIQ
VLDHFAAVDLPDQGDFVAAQQAFFGHRGFLALRPYISGRRGRSAGGSMRPPPPSRMPSKPAQPLA*
AnnotationID:6017GeneID:6016
AnnotatorUID: danlee
Modification Date/Time: 2004-03-08 15:03:09
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:11927




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29153




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49018How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 2077364Stop: 2076735

          
Length: 630


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGAACATCCTCCGGCTCCAACCGATACAACTCCTCATCCGGTTCCATGCACAGCCGGCATCCGAGTCTCGT 
ATAAAAATCCACCGTGTTCTGCGACGGCGTAGCCGAAACGTAGAGCGCGCTGGCGCCGAGGTGGCGGGCCTG 
GGTGGCGGCGAGGTGGAAGAGGTGGGCGCCGAGGCTGCGGCGGCGGTAGGCGTGGCTGAGGTGGAGAAACTT 
CAGTTGCAGCCAGTCGCGCTCGGGGCCGAGGCGGCGCGGGTcgaGGACTACCGCGCCGATCAGGTGGCCCTG 
GTCGAACAGGCCGAGGAACCAGCCGCCGCGGTCGAAGCAGTCGAGCAGGATCGGCGTGTAGTGCTCGGCCTC 
GCCCTCCGGCCAGCCGCGCATGTCGTAGAACTCGGGGCGCAGCACCAGTTGGCCGGCCTCGACGGAATACAG 
GTGCTCGATCACTTCGCTGCGGTCGATCTCCCAGACCAGGGGGATTTCGTCGCGGCGCAGCAGGCGTTCTTC 
GGTCATCGTGGTTTCCTTGCGCTAAGGCCGTACATCAGCGGCAGGCGCGGACGATCGGCGGGCGGCAGCATG 
CGTCCGCCGCCGCCGTCGCGCATGCCGTCGAAGCCGGCCCAGCCGTTGGCGTAG