ViewGene

Locus Name:
GeneID:
Location:

GeneID:6014
TrivialName: PA14_32920
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32920
PAO1 Ortholog Locus:
Sequence Length:2649
Protein Length:882
Start: 2882615
Stop: 2879967
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 204/837 (24%), Positives = 290/837 (34%), Gaps = 180/837 (21%)
Sequence:
GTGCGAGGTTTGCAGGCGCGCCGCCAACTGGCGGGTCGATGGATAGCTGACGTAGAGCTTCTCCAGCAGGGC
TTTCTCGAAGCCCTCCACCGCCTCCTCCAGGCTGCCCACCTCGCCGTCGTTCTGCCGCGCCACGGCGGTGCC
GGCGATCTCCAGGTCGCCGATATCCACCAGGCTGCTCTCGCAGATCGCAGCGGCGCGGAAGATCACATTCTG
CAACTGGCGCACGTTGCCCGGCCAGCGGTTGCTCAGCAGCGCCGGGTAGGTGCCCGGCGCCAGCCGACACAC
CGGGCGCTGGATCTGCGCACAGGCCTGCTGCATGAAGTGCCGCGCCAGCAGCAGGATGTCGTGGCCGCGCTC
TCGCAACGGCGGGACTTCCAGGCTGAGCACGTTGAGGCGGTAGAACAGGTCCTCGCGGAAGCTGCCCTCGGC
GACCATCTTCTCCAGGTTGCGGTGGGTGGCGCTGAGGATCCGCACGTCGACCCTCACCTCGCGGTCGCCGCC
GACCCGGCGGAAGCTGCCGTCGCTGAGGAAGCGCAGCAGCTTGGCTTGCAGATAGGGGGACATCTCGCCGAT
CTCGTCGAGGAACACCGTGCCCTGGTGGGCCAGCTCCAGCAGGCCTGGCTTGCCGCCGCGCTGGGCGCCGGT
GAAGGCGCCGGGGGCGTAGCCGAACAGCTCGCTTTCGGCCAGGTTCTCCGGCAACGCCGCGCAGTTCAGCGC
CAGGAACGGCGAGTTGTGCCGCGCACTCAGGGCGTGACAGCCGCGCGCCACCAGTTCCTTGCCGGTACCGGT
CTCGCCGTGGATCAGCAGCGGCGCGTCGAGCGCCGCCACGCGCTGCGCACGGGTCTTCAGGGTGCGGATCGG
CTGGGAATCGCCGAGGAGCATCTCGAACCCCTCGGCATGGTCATGGTGCAAGGCAGCCAGGCGCTCGCCGAT
GCGGTTCGGTTCGTAGAGGGTCAACAGGCCGCCGGCCAGGTGCCGCTCGCCCTCGCCCGGCCCTTCGGTGAT
CGGCGTGGCATCGAGCAGCAGGGCCTGGCCCATGAAGGTCACTTCGCGCAGCGGCAGGCGGAAGCCCTGCTC
GACCAGCGCATCCTCCAGGGTTTCATCGTCGAACAGGCTGGCCAGCCGCTCGCCGGCCGGGTCGCGTCCGCA
GCGCTCGCTGAAGGCCGGGTTGGCCAGCAGCACCAGGCCCTTGCCGTCCACCGCCAGCACCGGATCGGCCAT
CGCCGCCAGCAACGCATCGAGCTGCAAGCGGCGGCGCTGGCCGGGAAGGATGTCGACCACGGTCATCGCCTG
CACGCCACGGATGCCCAGCAGCGCTGCGCGCAGTTCCTCCAGCACTTCGGGACTGAGGGTCGGCGCGTCGAT
GTAGACGTTCGGCGGCACCATTTCCACCGCGTCCAGGTTCAGGTTGCGCCCGCCCAGCAGCGCCAGCACCTC
CTGGGTGATGCCGACACGGTCGATGAAGGAGACGTGGATGCGCATGCGGGAACCTGGACTGCGGCGACGCTC
GCCATAAAGCCGTCGATTGTACGGCCTGGCGCCGCCCAGCCCAAGGGGCCGGCGTCAGGGTACGGGGCGCAG
CGTCTCGCTGCGGGTGTGGTGGCTCCAGTCGCCCTCGTCGTCCATCACGGTTTCGGTCACCAGCACTCGGCC
CGGCTGCTGCGGGTCGGCCTTGTACAGCACCAGCTCGGCCTCGGCATCGTCCCAGGTGGTGGAGATGTCCGG
CAGCACCCGCACCCACTGGCCATCGCGGATTTCCAGCAGCGACGACTTGGTCCAGGTGCTGGTCCACCAGGT
ACGCAGCAGTTGCAGGCGCTCGCGGCCGCTGTCGTCGAGGCCGCCGAGGACGCTGAGCACCGCGCCGGTGCA
ACTGCCCAGCGGCTTGGGCGGGACGCGCGCGTCGGCGCTCCAGAGGTCGCAGCGGCAATCCTCGTATTCGTC
GCACAAGGCGGCGCTGTTCGGCGCGTGGGCCACTACCCAGGCGAAATCCGCTTCGGTACCGGCGAAGCGGCC
GCGAGCCAGCGGGGTGTACCGCGGGTCGACGGCGTAGCGGGTGATCTCGTCGCTCTCGCCGACGAAGCGCCA
GGTATCGCCCGGCCCGGCGCGCTCGGCCAGGAGCAGCCCCGGATAGTTGCGCAGGCGTCCGTCGAGGCGTAC
CTGCTTGACGAAGCGCACCTCGTAGCGGCCTTCCTGGTCGCCCGGCACGATCTGCGGCGCAGCGACGATGCG
CTGCTCGAAGTCGGGATGGCGGGCGAAGAAGGCCTGCTTGGCGGAGAGGGTGCGCTCGCGCGTCTGCGCGCG
GCCATAGTAGTCCAGGCGCGGCGCATAGACCCCTTCCAGGGCCTTGCCGCTGCGCTGCCCGTGGGCGGCCTG
CCAGCGCTGGAACAGGCCGAGGATTTCGCTTTCGGCGGCAGCCTGGACCAGCGCTGGGTACAGGCAGAAGAG
CGCGGCGCAGAATACCGGGCGCAAGAGTCGGCGCATCGAGAACATCCTTGTCGTTCGATTGAGGCGAACGCC
GATTGTCCCCTATCCGCCGACGCTGGCAAATGGCCCTGGACGATTTTTTCCGATTCCGCAACGCGGTGGGCA
TTGCGAATACGCTCCGGACAGCCTTCCCCCACCTCCAGGCCGCAGCACGGCGGATAA
Translation:
MRGLQARRQLAGRWIADVELLQQGFLEALHRLLQAAHLAVVLPRHGGAGDLQVADIHQAALADRSGAEDHIL
QLAHVARPAVAQQRRVGARRQPTHRALDLRTGLLHEVPRQQQDVVAALSQRRDFQAEHVEAVEQVLAEAALG
DHLLQVAVGGAEDPHVDPHLAVAADPAEAAVAEEAQQLGLQIGGHLADLVEEHRALVGQLQQAWLAAALGAG
EGAGGVAEQLAFGQVLRQRRAVQRQERRVVPRTQGVTAARHQFLAGTGLAVDQQRRVERRHALRTGLQGADR
LGIAEEHLEPLGMVMVQGSQALADAVRFVEGQQAAGQVPLALARPFGDRRGIEQQGLAHEGHFAQRQAEALL
DQRILQGFIVEQAGQPLAGRVASAALAEGRVGQQHQALAVHRQHRIGHRRQQRIELQAAALAGKDVDHGHRL
HATDAQQRCAQFLQHFGTEGRRVDVDVRRHHFHRVQVQVAPAQQRQHLLGDADTVDEGDVDAHAGTWTAATL
AIKPSIVRPGAAQPKGPASGYGAQRLAAGVVAPVALVVHHGFGHQHSARLLRVGLVQHQLGLGIVPGGGDVR
QHPHPLAIADFQQRRLGPGAGPPGTQQLQALAAAVVEAAEDAEHRAGATAQRLGRDARVGAPEVAAAILVFV
AQGGAVRRVGHYPGEIRFGTGEAAASQRGVPRVDGVAGDLVALADEAPGIARPGALGQEQPRIVAQASVEAY
LLDEAHLVAAFLVARHDLRRSDDALLEVGMAGEEGLLGGEGALARLRAAIVVQARRIDPFQGLAAALPVGGL
PALEQAEDFAFGGSLDQRWVQAEERGAEYRAQESAHREHPCRSIEANADCPLSADAGKWPWTIFSDSATRWA
LRIRSGQPSPTSRPQHGG*
AnnotationID:6015GeneID:6014
AnnotatorUID: danlee
Modification Date/Time: 2004-03-08 13:01:42
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15861
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29149
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49016How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2071309Stop: 2073957
Length: 2649
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGAGGTTTGCAGGCGCGCCGCCAACTGGCGGGTCGATGGATAGCTGACGTAGAGCTTCTCCAGCAGGGC
TTTCTCGAAGCCCTCCACCGCCTCCTCCAGGCTGCCCACCTCGCCGTCGTTCTGCCGCGCCACGGCGGTGCC
GGCGATCTCCAGGTCGCCGATATCCACCAGGCTGCTCTCGCAGATCGCAGCGGCGCGGAAGATCACATTCTG
CAACTGGCGCACGTTGCCCGGCCAGCGGTTGCTCAGCAGCGCCGGGTAGGTGCCCGGCGCCAGCCGACACAC
CGGGCGCTGGATCTGCGCACAGGCCTGCTGCATGAAGTGCCGCGCCAGCAGCAGGATGTCGTGGCCGCGCTC
TCGCAACGGCGGGACTTCCAGGCTGAGCACGTTGAGGCGGTAGAACAGGTCCTCGCGGAAGCTGCCCTCGGC
GACCATCTTCTCCAGGTTGCGGTGGGTGGCGCTGAGGATCCGCACGTCGACCCTCACCTCGCGGTCGCCGCC
GACCCGGCGGAAGCTGCCGTCGCTGAGGAAGCGCAGCAGCTTGGCTTGCAGATAGGGGGACATCTCGCCGAT
CTCGTCGAGGAACACCGTGCCCTGGTGGGCCAGCTCCAGCAGGCCTGGCTTGCCGCCGCGCTGGGCGCCGGT
GAAGGCGCCGGGGGCGTAGCCGAACAGCTCGCTTTCGGCCAGGTTCTCCGGCAACGCCGCGCAGTTCAGCGC
CAGGAACGGCGAGTTGTGCCGCGCACTCAGGGCGTGACAGCCGCGCGCCACCAGTTCCTTGCCGGTACCGGT
CTCGCCGTGGATCAGCAGCGGCGCGTCGAGCGCCGCCACGCGCTGCGCACGGGTCTTCAGGGTGCGGATCGG
CTGGGAATCGCCGAGGAGCATCTCGAACCCCTCGGCATGGTCATGGTGCAAGGCAGCCAGGCGCTCGCCGAT
GCGGTTCGGTTCGTAGAGGGTCAACAGGCCGCCGGCCAGGTGCCGCTCGCCCTCGCCCGGCCCTTCGGTGAT
CGGCGTGGCATCGAGCAGCAGGGCCTGGCCCATGAAGGTCACTTCGCGCAGCGGCAGGCGGAAGCCCTGCTC
GACCAGCGCATCCTCCAGGGTTTCATCGTCGAACAGGCTGGCCAGCCGCTCGCCGGCCGGGTCGCGTCCGCA
GCGCTCGCTGAAGGCCGGGTTGGCCAGCAGCACCAGGCCCTTGCCGTCCACCGCCAGCACCGGATCGGCCAT
CGCCGCCAGCAACGCATCGAGCTGCAAGCGGCGGCGCTGGCCGGGAAGGATGTCGACCACGGTCATCGCCTG
CACGCCACGGATGCCCAGCAGCGCTGCGCGCAGTTCCTCCAGCACTTCGGGACTGAGGGTCGGCGCGTCGAT
GTAGACGTTCGGCGGCACCATTTCCACCGCGTCCAGGTTCAGGTTGCGCCCGCCCAGCAGCGCCAGCACCTC
CTGGGTGATGCCGACACGGTCGATGAAGGAGACGTGGATGCGCATGCGGGAACCTGGACTGCGGCGACGCTC
GCCATAAAGCCGTCGATTGTACGGCCTGGCGCCGCCCAGCCCAAGGGGCCGGCGTCAGGGTACGGGGCGCAG
CGTCTCGCTGCGGGTGTGGTGGCTCCAGTCGCCCTCGTCGTCCATCACGGTTTCGGTCACCAGCACTCGGCC
CGGCTGCTGCGGGTCGGCCTTGTACAGCACCAGCTCGGCCTCGGCATCGTCCCAGGTGGTGGAGATGTCCGG
CAGCACCCGCACCCACTGGCCATCGCGGATTTCCAGCAGCGACGACTTGGTCCAGGTGCTGGTCCACCAGGT
ACGCAGCAGTTGCAGGCGCTCGCGGCCGCTGTCGTCGAGGCCGCCGAGGACGCTGAGCACCGCGCCGGTGCA
ACTGCCCAGCGGCTTGGGCGGGACGCGCGCGTCGGCGCTCCAGAGGTCGCAGCGGCAATCCTCGTATTCGTC
GCACAAGGCGGCGCTGTTCGGCGCGTGGGCCACTACCCAGGCGAAATCCGCTTCGGTACCGGCGAAGCGGCC
GCGAGCCAGCGGGGTGTACCGCGGGTCGACGGCGTAGCGGGTGATCTCGTCGCTCTCGCCGACGAAGCGCCA
GGTATCGCCCGGCCCGGCGCGCTCGGCCAGGAGCAGCCCCGGATAGTTGCGCAGGCGTCCGTCGAGGCGTAC
CTGCTTGACGAAGCGCACCTCGTAGCGGCCTTCCTGGTCGCCCGGCACGATCTGCGGCGCAGCGACGATGCG
CTGCTCGAAGTCGGGATGGCGGGCGAAGAAGGCCTGCTTGGCGGAGAGGGTGCGCTCGCGCGTCTGCGCGCG
GCCATAGTAGTCCAGGCGCGGCGCATAGACCCCTTCCAGGGCCTTGCCGCTGCGCTGCCCGTGGGCGGCCTG
CCAGCGCTGGAACAGGCCGAGGATTTCGCTTTCGGCGGCAGCCTGGACCAGCGCTGGGTACAGGCAGAAGAG
CGCGGCGCAGAATACCGGGCGCAAGAGTCGGCGCATCGAGAACATCCTTGTCGTTCGATTGAGGCGAACGCC
GATTGTCCCCTATCCGCCGACGCTGGCAAATGGCCCTGGACGATTTTTTCCGATTCCGCAACGCGGTGGGCA
TTGCGAATACGCTCCGGACAGCCTTCCCCCACCTCCAGGCCGCAGCACGGCGGATAA