ViewGene

Locus Name:
GeneID:
Location:

GeneID:6013
TrivialName: PA14_32960
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32960
PAO1 Ortholog Locus:
Sequence Length:1806
Protein Length:601
Start: 2884576
Stop: 2882771
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens]
Identities = 130/434 (29%), Positives = 155/434 (35%), Gaps = 52/434 (11%)
Sequence:
GTGGCGACGAACATCGCCAGGGCATTCAATTTGTCCATCGACTCCTTCCGTTCCGGCACAAGTGTTGTGCGC
CGCGCCCGGTTCTGCCGGGCCGGCGCTTTGGCTAGTCTCGCCTTGCCCGGGCCACGCTACACAAGACCAAGA
AGCAAAGGAAACCACCATGAAGCAACGGATTCCCACCCTCCTCGCCGGCGCCTGCCTGGCCATCCCCCTGCA
CGCCCTCGGCGCCGCCGACCTGCTGGTGGTCAACGCCAGGATCTTCACCGCCAATCCGCAGCAACCCTTCGC
CGAGGCCCTGGCGGTGGAGGACGGGCGGATCCTCGCGGTCGGCGACGAGGCCGGGCTGCGCGCCCTGGCCGA
TGGCGACAGCCAGGTCGTCGATCTCGGCGGCAAGCGCCTGATGCCCGGCCTGATCGACACCCATTCGCACGC
GGTGTTCGGCGGCCTGGAGCTGGCCGGCGCGGACATGGGCAACGAACAGGTCGGCCTCGACGAACTGGAACG
GCGCCTGCGCGCCTGGCGCGACAACGGCAAGGCGCGACATGGCGACATGCTCAATGTCAGCGGCATGCATAC
CGCCTACTGGAGCCAGGTCAAGGACTTCCGCGCGCGCTTCGACCACGGCGAATGGGCCGACCAGCCGCTGGC
CTTCATCGGCAGCGACCACCACACCGGCTGGGCCAACGCCGCCATGCTGAAACGCGCCGGCATCGACGCCGC
GCGGGTCCGCGCCCTGCCCAAGGAACAGCGCAACACCATCGGCCACGACGCCGACGCCACCCCCAACGGCTT
CCTCGCCGATGCTGGTCTCGACGCGGTGCTCGCGGTACTGCCGGCGCCGAGCGCGGAACAGATGCTAGAAGC
CGGACGCAGCGCGGTGCGCTACAGCAACTCGCTGGGCCTGACCGCATGGATGGACCCGGCCGCCAATGGCTC
GCCGGGCGACGCCCTGTTCAGCCTCAGGCCCGACGAGAACACCGTCGGCGTGCTACCGGTCTACCAGCGGCT
GGCCAAGGGCGGCGAACTCAGCGCCCACGTCGCCGCCCTCCTGGTCGCCAACCCACGCAGCCGGCCGGCCGA
CCTCGAGGTGCTGGACAAGGTGCGCCAGCGCTTCCTCGGCAGCCCCAACCTGACCCTGCCGGGAATCAAGGT
GTTCGCCGACGGCGTACCGGAATACCCGGCGCAGACCGCCGCGCTCCTCGAGCCCTACCGCAACAGCAGGAA
GACGGGCGAACTGCTGATCGACCCGGCGCACTTCGGCGAACTGGTCAGCGCCGCCGACGCCCGCGGCTGGCT
GGTCCACGTCCACGCCATCGGCGACCGCGCGGTGCGCGAGGCGCTGAACGGCATGCAGCAGGCGCGGCGCGA
CCGCGACAGCGGCATCGCCCATTCGATCACCCACCTGCAACTGGTCAATCCCAAGGAATTCGAGCGCTTCAG
GCCGCTCGGCGTGATCGCCTCGATGCAGCTGTACTGGGCCGCCGCCGACGAAACCACGGTGGACCTGATGAA
GCCCTACATCAGCGCCTTCGCCTACCGCTACCAGTACCCGGCGCACTCCCTGCTGAGCAAGGGCGCGACCAT
CGCCGGGGCCAGCGACTGGCCAGTGTCCAGCCTGTCGCCGTGGAAGGCCATCCAGCAGGCGGTGACCCGCAA
GGGCCCGCAGGGCGTGCTCAATGCCGGCGAACGCCTGGACCGCCAGACCATGTTCTACGCCTACACCCGCAA
CGCTGCGCGGACCATCGGCCTGGAGCGCCGGATCGGCAGCCTGGAGCCGGGCAAGCAGGCGGACTTCATCGT
CCTTGA
Translation:
MATNIARAFNLSIDSFRSGTSVVRRARFCRAGALASLALPGPRYTRPRSKGNHHEATDSHPPRRRLPGHPPA
RPRRRRPAGGQRQDLHRQSAATLRRGPGGGGRADPRGRRRGRAARPGRWRQPGRRSRRQAPDARPDRHPFAR
GVRRPGAGRRGHGQRTGRPRRTGTAPARLARQRQGATWRHAQCQRHAYRLLEPGQGLPRALRPRRMGRPAAG
LHRQRPPHRLGQRRHAETRRHRRRAGPRPAQGTAQHHRPRRRRHPQRLPRRCWSRRGARGTAGAERGTDARS
RTQRGALQQLAGPDRMDGPGRQWLAGRRPVQPQARREHRRRATGLPAAGQGRRTQRPRRRPPGRQPTQPAGR
PRGAGQGAPALPRQPQPDPAGNQGVRRRRTGIPGADRRAPRALPQQQEDGRTADRPGALRRTGQRRRRPRLA
GPRPRHRRPRGARGAERHAAGAARPRQRHRPFDHPPATGQSQGIRALQAARRDRLDAAVLGRRRRNHGGPDE
ALHQRLRLPLPVPGALPAEQGRDHRRGQRLASVQPVAVEGHPAGGDPQGPAGRAQCRRTPGPPDHVLRLHPQ
RCADHRPGAPDRQPGAGQAGGLHRP*
AnnotationID:6014GeneID:6013
AnnotatorUID: danlee
Modification Date/Time: 2004-03-08 13:01:40
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15859
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29147
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49015How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 2069348Stop: 2071153
Length: 1806
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCGACGAACATCGCCAGGGCATTCAATTTGTCCATCGACTCCTTCCGTTCCGGCACAAGTGTTGTGCGC
CGCGCCCGGTTCTGCCGGGCCGGCGCTTTGGCTAGTCTCGCCTTGCCCGGGCCACGCTACACAAGACCAAGA
AGCAAAGGAAACCACCATGAAGCAACGGATTCCCACCCTCCTCGCCGGCGCCTGCCTGGCCATCCCCCTGCA
CGCCCTCGGCGCCGCCGACCTGCTGGTGGTCAACGCCAGGATCTTCACCGCCAATCCGCAGCAACCCTTCGC
CGAGGCCCTGGCGGTGGAGGACGGGCGGATCCTCGCGGTCGGCGACGAGGCCGGGCTGCGCGCCCTGGCCGA
TGGCGACAGCCAGGTCGTCGATCTCGGCGGCAAGCGCCTGATGCCCGGCCTGATCGACACCCATTCGCACGC
GGTGTTCGGCGGCCTGGAGCTGGCCGGCGCGGACATGGGCAACGAACAGGTCGGCCTCGACGAACTGGAACG
GCGCCTGCGCGCCTGGCGCGACAACGGCAAGGCGCGACATGGCGACATGCTCAATGTCAGCGGCATGCATAC
CGCCTACTGGAGCCAGGTCAAGGACTTCCGCGCGCGCTTCGACCACGGCGAATGGGCCGACCAGCCGCTGGC
CTTCATCGGCAGCGACCACCACACCGGCTGGGCCAACGCCGCCATGCTGAAACGCGCCGGCATCGACGCCGC
GCGGGTCCGCGCCCTGCCCAAGGAACAGCGCAACACCATCGGCCACGACGCCGACGCCACCCCCAACGGCTT
CCTCGCCGATGCTGGTCTCGACGCGGTGCTCGCGGTACTGCCGGCGCCGAGCGCGGAACAGATGCTAGAAGC
CGGACGCAGCGCGGTGCGCTACAGCAACTCGCTGGGCCTGACCGCATGGATGGACCCGGCCGCCAATGGCTC
GCCGGGCGACGCCCTGTTCAGCCTCAGGCCCGACGAGAACACCGTCGGCGTGCTACCGGTCTACCAGCGGCT
GGCCAAGGGCGGCGAACTCAGCGCCCACGTCGCCGCCCTCCTGGTCGCCAACCCACGCAGCCGGCCGGCCGA
CCTCGAGGTGCTGGACAAGGTGCGCCAGCGCTTCCTCGGCAGCCCCAACCTGACCCTGCCGGGAATCAAGGT
GTTCGCCGACGGCGTACCGGAATACCCGGCGCAGACCGCCGCGCTCCTCGAGCCCTACCGCAACAGCAGGAA
GACGGGCGAACTGCTGATCGACCCGGCGCACTTCGGCGAACTGGTCAGCGCCGCCGACGCCCGCGGCTGGCT
GGTCCACGTCCACGCCATCGGCGACCGCGCGGTGCGCGAGGCGCTGAACGGCATGCAGCAGGCGCGGCGCGA
CCGCGACAGCGGCATCGCCCATTCGATCACCCACCTGCAACTGGTCAATCCCAAGGAATTCGAGCGCTTCAG
GCCGCTCGGCGTGATCGCCTCGATGCAGCTGTACTGGGCCGCCGCCGACGAAACCACGGTGGACCTGATGAA
GCCCTACATCAGCGCCTTCGCCTACCGCTACCAGTACCCGGCGCACTCCCTGCTGAGCAAGGGCGCGACCAT
CGCCGGGGCCAGCGACTGGCCAGTGTCCAGCCTGTCGCCGTGGAAGGCCATCCAGCAGGCGGTGACCCGCAA
GGGCCCGCAGGGCGTGCTCAATGCCGGCGAACGCCTGGACCGCCAGACCATGTTCTACGCCTACACCCGCAA
CGCTGCGCGGACCATCGGCCTGGAGCGCCGGATCGGCAGCCTGGAGCCGGGCAAGCAGGCGGACTTCATCGT
CCTTGA