ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6009

TrivialName: PA14_33090

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 18:06:02

LocusName: PA14_33090

PAO1 Ortholog Locus:

Sequence Length: 1251

Protein Length: 416

Start: 2899712

Stop: 2898462

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK50260.1|U66917_27 (U66917) TraC protein [Pseudomonas sp. ADP] Identities = 90/365 (24%), Positives = 135/365 (36%), Gaps = 51/365 (13%)

Sequence:

TTGTTTCACAGCCCGCGAAGGGCACCGTCGGGCAGCGGCTCATGGCTGCCCGCCTTGCAGAATCAGGCGGCC
GTCGTCGCGCGGATCGACGCTGCCGACCGAACCGGCCTTGCCGAGGATCGCCGGCACCCGTTCGCGGTACAG
GCGCCAGAGCAGGCCGGGATCGGTCGCGCCCAGCGCCGGGGCCAGGCCAACGATGCTGGCGGTGTCGCGGCG
CGCCTGGGCCAGCCGTTCGCCGGCCTCGGCGCGGGCGACCTGCAGGGTGCGGTCGGCCCCCTCGGTGGCCGC
CTGAGTGAGTTTCTCCGCCTCGGTGCGCGCCTTGGCGACGTTCTGCTCGGCCAGTTGGCTGGCGGTCAGCAC
CGCGTTGAAAGCGCTTACCGCATTGCGCGGCAGGCTCGACTGCACGTCGACCCGCACCACCTGGATGCCCAG
CCCGCTGCCGGCCGCGGCCAGCGCCGCCAGGCTGTGGTTGATGCCCTGCACCAGGTCGCCGCGCAGGCGTTC
GCGGCGCTCGGCGACCGCGCTGTCGTTGCCGAGCAACTCCGGGCGCGCCACCAGGATGGTGTCCAGGTCGCG
CGCGGCGCAGaCCTGCACGGCGTTGCGCGCCACCAGCCGGTCCAGCGCCGGCAGCACGTGGGCGCCCTGGAG
GACGTAGTCGTACGGGTCGTCGACCTTGTAGAACACCCGCACGTCCAGTTGCACCACCCCGGCGTCGCCGGT
CAGCAGGTAGCCGGAGCCGGCCAGCGCGTCGCTGGACAGGCTGACGTCGAGGTCGGCGCGACGCGCCTGCTC
GGAGCGCAGCAGGCCCTCGACGCGGCGTTCGATCACCTGTTCGGCGGACGGCAGCAGCACCACCTGCTCCAG
CGGCTGCGGCCAGGCCAGCAGCAGGCCGGGACCGGCCAGGCGCTCCAGCGCGCCCAGGCGCAGCACTACGGC
GCGGTTCTCCGGGCCGATCTGGCGGACGTTGGAAAACACCCAGGCCAGCGCCGCCAGGAGGGTCACGCCGAA
CAGTGCGAGGAACGCCAGGCGTCCGGCCTGCAGCCAGGGGCTGCGCAGCCCCTCGTGCGCTTCGTCGCTCAT
GGCCGGCGCCCGTTGGCCGGCGCTTCGGCGGGGAGCGCCGGCGGCCCGTCGACCAGCACGCGGAACGGTGCG
GCATCGGTGCGCAAGACCAGGCGGGTATCGCCGTTGACGATGGTGCCGAGGGTGTCCAGCGAGCGCAGCAGG
TTGTACAGCTGCGGCGAACCGGCGTAG

Translation:

MFHSPRRAPSGSGSWLPALQNQAAVVARIDAADRTGLAEDRRHPFAVQAPEQAGIGRAQRRGQANDAGGVAA
RLGQPFAGLGAGDLQGAVGPLGGRLSEFLRLGARLGDVLLGQLAGGQHRVESAYRIARQARLHVDPHHLDAQ
PAAGRGQRRQAVVDALHQVAAQAFAALGDRAVVAEQLRARHQDGVQVARGADLHGVARHQPVQRRQHVGALE
DVVVRVVDLVEHPHVQLHHPGVAGQQVAGAGQRVAGQADVEVGATRLLGAQQALDAAFDHLFGGRQQHHLLQ
RLRPGQQQAGTGQALQRAQAQHYGAVLRADLADVGKHPGQRRQEGHAEQCEERQASGLQPGAAQPLVRFVAH
GRRPLAGASAGSAGGPSTSTRNGAASVRKTRRVSPLTMVPRVSSERSRLYSCGEPA*

AnnotationID:6010 GeneID:6009

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 18:06:17

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

no homologie detected.

Structural Features:

Genomic Context:

Comment:

ReferenceID:15855

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29139