ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6007

TrivialName: PA14_33180

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 09:09:20

LocusName: PA14_33180

PAO1 Ortholog Locus:

Sequence Length: 2415

Protein Length: 804

Start: 2906816

Stop: 2904402

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD78505.1| (BX294147) hypothetical protein-putative transmembrane protein [Pirellula sp.] Identities = 119/566 (21%), Positives = 204/566 (36%), Gaps = 122/566 (21%)

Sequence:

ATGTCCGCCCTCCTCTTCTGGTTCTTCGACGACCGCCGGTGCGCCGCGGTCCTCCTCCAGCAACGTCCGATA
GCGTTGCAGCGACTGCTGCAGGATCAGTACCGCGACATTCATGATGAAGCGCTGCCGCGTCGCCCCGAGGTC
CTTCGACGGCTGCGCCAGCAAGGCCTCCAGGCCCCGGCCGAAACGCTGCAGGGCGGCCAGGGCGAGGTCCTG
CCGCGGGGCGTCCGCGCCGCCGGCTATGTAGGCGGCGACCTCGCGCAGCGCCTCGCCCAGCAGCGGCTGCAA
CTCCAGCGGCACCACCCCGGCGTCATGCAGCGGCTCGCGCAGGCGGTTCAACGCCACGCCCATCACCACGCA
GCCCAGGGCGCACTGGAAACGTTCCGCCGCAGCCGACTCCTGGCTCGCCGGCAGCAGGCCGACCATCACCGC
CAGGCGATCGATCATCCGCGTCTCGAAGGCGAAGCGCTGCGCCTCGCTGGCCTCGCAGCGCGACATTTCCGC
GACGTCCTGGCGCGACAGGTAGAGCAGCCGGCGCAGGCGCGGGTCGGCGCGGAACGGATAGACCAGGGCGAA
CACCAGCACGGCGAGGACCGCCGCGGCGAGGAAGCCGCCGACGAACTCGAACCACTGCGAAGCGTTGCTGTA
GTAGACCGCGATATTCTGCGGCGCCACCATCAGCAGGGTCTCCAGGCCGATGCCCATGGCGATCCCGGCGCT
CAGCGGGCTGCTCAGGCCGACCGCGACCACGTACAGCAGCAACGCCATCCACAGCGCCAGCCACTCGAAGTC
GGCGGATGCCGGCAACAGCACGAACAGCAGCGCCGCCGAGATCAGGATCGCCAGCAGCAGCCCGCGCAGGAA
GTTCTGCGCCGCCAGCAGCGGACGCGGGAAGGTCGCCATCAGCGAGCACATCACGCCGACCAGCAGCAGGCT
GCTGAGGGCGCCGTTCCAGGCGCTGGTGATCCACAGCCAGGCGGCGCAGGACAAGGCGACGAAAGCGCGCAC
GGCATTCATCGAGGCCAGCGCCCAGTCCAGGTGCAGCGCCTGCGCCTGGCCACGGCGGTAGAAACTGCTGGC
CTGGCGGCCGGACTGGATCGCATCGTTGAGTTCGAGCACTTCGCCCAGGCGCTGGAACAGCCGCGCGTATTC
CCAGCGCAGGATCGCCACCTGCGGGCGCAGCGCCGGGCTCAGCGCCTCGTCGTAGGACTCCGCGCGCGTCGC
CGCGGCATCGAAGGCCTGGCGCACCGCCTGGAACTCCTCCAGCACCTCGGAGGGTACCGCCCGCCCCTGCTC
GGCCAGCGCGTCCAGCACCCGCAGCGCACGATCCAGGAGCGCCTGGATATCCGCCGGCAACGGCCCGACCCA
GTGCGCCCGCACCAGCAGGCGATGCTGGCGCAGCAGCAACAGCCGCGAGGCCATCAGCACCAGCAGGTTGCC
CAGCAACTGCACCAGGCCATCGGCGCGGCGCAGGTTCGGCGCGTCGAAATAGAGGTGCCGGCGCAGGCCGTC
CAGCGCGGTGATGCTGGCGACCAGTTGCATCTGCCGCTGGTTGAACGACTCGTCGCCCTCGTCGCCGCGGAT
CACCGCCGCGGCGTGCCGCGCGGTACTGCGGATCAGGCCGTCGACCTGGGCGAAGTAGCCCTTCGCCACCGC
CTGCGGACGCGCGCTGAGCAGGCTGACCAGGGCCACGCAGGCGACGCCCAGCAGGGTCTCGGTGACCCGCAC
CACGGCGAGCATGAAGGTGTTTTCCGGATCGGGAATCGACAGCACGGCGACGATCACCGCGGTGAAGCCGCT
GAGCACGAAGGCGTGCGAATCGGTGTAGCGCAGCAAGGTGCCGCCGGCGGTGCAGAGCGCCAGCCAGAGTCC
CAGGGCGACGAAGAACGGCAACGGTTGCTGGGCGAACAGCGCCATGATCAGCACCGCCACCACGGCGCCGGC
GAAGGTACCGACGACCTGGGCGAAGCTGCGCTTGAGAGCCATCCCGGCCAGCGGCTGGCTGACGATGACCAC
GGTCATCAGCGCCCACTTCGGCTGCTCCAGGTCGAAGAGGAAGGCCAGGTAGAGGGTCAGCAGCCCGGCGGC
GACGGTGCGCAGGGCGAACAGCAGGGTTTCCCGCGGCTGCCGCCAGAGCAAGCGGGCGTAGAGTTTCAGCCC
TTCCATGCCCGGCCCCGCACCTCCAGGCAACGGTTGGCCGCGGACCAGGCGGCGATGAAGCGACTCGACATG
CTGGTTTCTCGTTCGGGGTTGATGCGGCGGGTTGGCTTCCAGTCTAGAAGGCGCAAGGAAATCCGTGGCCGC
CTACGGGGGCGGGCAGGTGCGGTCGGCCACGGAGCGACGAGTCGCGACTACAGGGTAAAAGCCCCGGCGGCC
TTCCCGGTAGCGCGTCCAGGCGAAAACCGTTTTCGCTGA

Translation:

MSALLFWFFDDRRCAAVLLQQRPIALQRLLQDQYRDIHDEALPRRPEVLRRLRQQGLQAPAETLQGGQGEVL
PRGVRAAGYVGGDLAQRLAQQRLQLQRHHPGVMQRLAQAVQRHAHHHAAQGALETFRRSRLLARRQQADHHR
QAIDHPRLEGEALRLAGLAARHFRDVLARQVEQPAQARVGAERIDQGEHQHGEDRRGEEAADELEPLRSVAV
VDRDILRRHHQQGLQADAHGDPGAQRAAQADRDHVQQQRHPQRQPLEVGGCRQQHEQQRRRDQDRQQQPAQE
VLRRQQRTREGRHQRAHHADQQQAAEGAVPGAGDPQPGGAGQGDESAHGIHRGQRPVQVQRLRLATAVETAG
LAAGLDRIVEFEHFAQALEQPRVFPAQDRHLRAQRRAQRLVVGLRARRRGIEGLAHRLELLQHLGGYRPPLL
GQRVQHPQRTIQERLDIRRQRPDPVRPHQQAMLAQQQQPRGHQHQQVAQQLHQAIGAAQVRRVEIEVPAQAV
QRGDAGDQLHLPLVERLVALVAADHRRGVPRGTADQAVDLGEVALRHRLRTRAEQADQGHAGDAQQGLGDPH
HGEHEGVFRIGNRQHGDDHRGEAAEHEGVRIGVAQQGAAGGAERQPESQGDEERQRLLGEQRHDQHRHHGAG
EGTDDLGEAALESHPGQRLADDDHGHQRPLRLLQVEEEGQVEGQQPGGDGAQGEQQGFPRLPPEQAGVEFQP
FHARPRTSRQRLAADQAAMKRLDMLVSRSGLMRRVGFQSRRRKEIRGRLRGRAGAVGHGATSRDYRVKAPAA
FPVARPGENRFR*

AnnotationID:6008 GeneID:6007

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 09:09:44

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:11910

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29135