ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5996

TrivialName: PA14_33400

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_33400

PAO1 Ortholog Locus:

Sequence Length: 1440

Protein Length: 479

Start: 2939443

Stop: 2940882

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE32630.1| (BX640443) putative membrane protein [Bordetella bronchiseptica] Identities = 103/400 (25%), Positives = 150/400 (37%), Gaps = 43/400 (10%)

Sequence:

GTGGGTTCAGAGCAACCTGATCGGGTAGTCGACCACCACCCGGTATTCGTCGGAGCTGGAGTTGCCGCGGGT
GTTGCCGGGGGCGGTGTAGCCTTCGCCGGGGCGGTGGGTGGCCCAGCGCAGGGTCACGCTGAGGCCCTTGGC
CGGGCCGGCGGGGAAGGCATAGCGCAGCGACAGGTCGCGTTCCCAGTGCTGGGCGTTCTTGCCATTGGGGTT
GTAGAGGTAGCCGTAGCCCGCGCTGTCCGGGTCGACCCGGGTCAGGTCGGCCTGGCCACGGCCGTAGGCGGC
GCCGAATTGCCAGTCCGGGGCGGCGAGGAAGGCCAGGCTGGCCTGGTACTGGATCTTCCACGAGCGCTCGCC
GGGGCCGTTGAAGTCGGCGTACTGCATGGCGTTGCTTTCGTAGAGGAAGGTCCGGTCGTTCTGCGCGATGAA
GTCGAACGGGGTGTCGCCATCGACCTTTTGCAGGCTGAGGCTCAGCGACTGGCCGCCGCCGGCCAGGGTCAG
CCCGGCGTTGTAGAGGTCGTTGTCGATCCGGCCGAGCTGGCTGCGGCCCTGGTCGCGGGTCTTGTAGTAATG
CAGCCAGGGCGTCAGGGTCAATTGGCTGGAAAGCCGCCACGGCTGGCTGAGGCCGAGGTAGTGCTGGTTCCA
GATATCCGCCAGGCGGCCGCTGTAGAGCGTCGCCTGGCTGCCGCCGGGGGCGCTGTAGCTGGCGCCCAGCCA
GGCGATGTGCGGGCTTTCGCGATCGGCGGCGATACCGCCCTTGGTGCCGTTGCCGTAGCCGCTGGTGAGATG
ACTATGGCCGCTCTGGTTGCGCAGGCGGGTGGCTTCGACGAAGCCGGCGTCCAGTTCGAGCGCGCGGAAATG
GTAGTTCTTCAGGGTCACGCCACGGTAGCTCTGCGGCACCATGCGACTGACGCCGCTGGCGATCACCGGGTT
CTCCAGCAACTGGTCGCCGATCTTCAGCAGGCTGTCCAGGCCGCGCAGCTTGAGGGCCGCGCCGGCCGCCGA
GAAGCTGTCGGCGGGGCGACCGGCGGAGTCCAGCGGCAGCACGCCGGCACCGCCGCTGCCGCCACCGCCGTC
CAGGCGCAGGCCGTAGAAGGCGTGCGCATCCAGGCCGATGCCTATCGGCGTGTCGGTATAGCCGGAGCGGAA
CGACAGCATCAGGCCCTGGGCCCATTCGCGCTGGTCGCGGCGGGACGGGGTGTCGTGGTTGTCGCGGGCGAA
ATAGTAGTTGCGGAGGAAACCGTTCAGCGTCGAGCCTTCGACGAAGCCCGGCGGCACCTTCATTTCGGCTTT
CTGCCGCTGGTTCAGGCCGGTGCTGATGTTGTCGCGATGGCCCAGGGAGTCGTCGGCCAGGAGCGAGCCCGG
ACCTATGGCAAGGGCAAGGCAGAGCGTAGCCCCGCGCTTCATGGAGGAATCAGGCATGGGTCCGGTCCGTAG

Translation:

MGSEQPDRVVDHHPVFVGAGVAAGVAGGGVAFAGAVGGPAQGHAEALGRAGGEGIAQRQVAFPVLGVLAIGV
VEVAVARAVRVDPGQVGLATAVGGAELPVRGGEEGQAGLVLDLPRALAGAVEVGVLHGVAFVEEGPVVLRDE
VERGVAIDLLQAEAQRLAAAGQGQPGVVEVVVDPAELAAALVAGLVVMQPGRQGQLAGKPPRLAEAEVVLVP
DIRQAAAVERRLAAAGGAVAGAQPGDVRAFAIGGDTALGAVAVAAGEMTMAALVAQAGGFDEAGVQFERAEM
VVLQGHATVALRHHATDAAGDHRVLQQLVADLQQAVQAAQLEGRAGRREAVGGATGGVQRQHAGTAAAATAV
QAQAVEGVRIQADAYRRVGIAGAERQHQALGPFALVAAGRGVVVVAGEIVVAEETVQRRAFDEARRHLHFGF
LPLVQAGADVVAMAQGVVGQERARTYGKGKAERSPALHGGIRHGSGP*

AnnotationID:5997 GeneID:5996

AnnotatorUID: danlee

Modification Date/Time: 2004-03-08 14:02:06

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15847

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29113