ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5988

TrivialName: PA14_34040

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:41

LocusName: PA14_34040

PAO1 Ortholog Locus:

Sequence Length: 1563

Protein Length: 520

Start: 3027570

Stop: 3029132

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK22647.1| (AE005742) ISCc2, transposase, fusion [Caulobacter crescentus CB15] Identities = 150/579 (25%), Positives = 196/579 (33%), Gaps = 120/579 (20%)

Sequence:

ATGATCGCATCCATCGCATCTGACTCCTGGAGAGGGGCTGTCTGGAACGGGAAGGGCGCCCCGCCGGCGCTG
CCGGCGGGGGCGGACTCACGCCGCTACCGGCGGCGGCAGGTTGGCGACCAGGCGGATCGACGCGCTGAGTTC
CTCGAGCTGGAAGTGCGGCCGGAGGAACACCGTGGCGCGGTAGGCCCCCGGTTTGCCGGCCACCTCGCTGAC
ATCCACCCGCGCCTCGCGCAGCGGGTACTGCGCCTTGATTTCCTGCGGTGCGTTGTCGTTGATCAGCACGTA
GTCGGCGATCCAGTTGTTCAGGTAGGTCTGCACGTTGTCGCGGGTCATGAAGCTGCCGACCTTGTCGCGCAT
GATCACCTTCAGGTAGTGGGCGAAGCGCGATGCCGCCAGCACGTACGGCAGCATCGCCGACAGGCGCGCGTT
GGCGTTGGCCTCGTTGGTGTTGTAGAGCCTGGCCTTGTTGGTGGTCTGGCCGCCGAAGAACACCGCCACGTC
GCTGTTCTTCTTGTGGCACAGGGAAATGAAGCCGAGATCGTTGAGTTCCTTCTCGCGGCGGTCGGTGATCGC
CACCTCGGTCGGGCACTTCAGCGACAGGTCGCCGGAGCTGGTGCGGAACGTGTGCGCCGGCAGGCCCTCGAC
CGCGCCGCCGCCTTCCGCGCCGCGGATCGCCGCGCACCAGCCGTACTTGGCGAAGGCCTCGGTGATGCGCTG
CGCCAGGACCCAGGCGGCGTTGCCCCAGAGGTACTTGGAGTGGTCGGTGCCGTTGACGTCCTCGACATAGTT
CATGCCTTCCACCGGGCGCGTCTCCGGGCCGTAGGGCAGGCGCAGGAGGAAGTTCGGCAGCACCAGCGACAC
GTAGCGCGAGTCCTCGCTCTCGCGGAAGGCGCGCCACTTGATCAGCTCCAGGCTCTCGAAGATCTTGGTCAG
GTCGCGCGGCACGGCCAGTTCGGTGAAGCTGTTCATGTCGAACAGGCGTGGGCTGGCGGCGGCGATGAACGG
CGCGTGGGCAGCCGCGGCGACGTTCGACAGCTTCTCCAGCAGGCCGATGTCCTGCGGATGGCGACCGAAGGT
GAAGTCGCCGATCAGCAGGCTGAAGGGCTGTCCGCCGAAGGTGCCGTATTCCTCTTCGTAGATCTTCTTGAA
CAGTGCGCTCTGGTCGAACTCGACCGCCTTCTCCAGGTCGTTCTGCAGTTCGTTCTTGCCGACGTTCAGCAG
GCGCAGCTTGAGCCGCGCGCTGGTCTCGGTGTTGCTCACCAGTTGGTGCAGGCCGCGCCAGGAGGCTTCCAG
CTTCTGCAACTCGGGGTGGTGGATGATCTGGTTGAGCTGGTCGCTGATCAGCGCATCGATCTGGCTGATGCG
GTCGTTGATCATCGCCACGGTGTCCTTGTCGACGGCCATGCCCTCGTCGAGGACCTGGGTGGCGAATTCCGC
GAGCATGTCGCGGGCATAGTCCTGCTGGCTGTCGTCGTGGGCCATGCGGCCCTTGGCGATGATCTCGTCGAG
CAGGGACAGGGTCTGGGTCGAACTCTCGCCGGATTGTTCGGCGGCGGATGA

Translation:

MIASIASDSWRGAVWNGKGAPPALPAGADSRRYRRRQVGDQADRRAEFLELEVRPEEHRGAVGPRFAGHLAD
IHPRLAQRVLRLDFLRCVVVDQHVVGDPVVQVGLHVVAGHEAADLVAHDHLQVVGEARCRQHVRQHRRQARV
GVGLVGVVEPGLVGGLAAEEHRHVAVLLVAQGNEAEIVEFLLAAVGDRHLGRALQRQVAGAGAERVRRQALD
RAAAFRAADRRAPAVLGEGLGDALRQDPGGVAPEVLGVVGAVDVLDIVHAFHRARLRAVGQAQEEVRQHQRH
VARVLALAEGAPLDQLQALEDLGQVARHGQFGEAVHVEQAWAGGGDERRVGSRGDVRQLLQQADVLRMATEG
EVADQQAEGLSAEGAVFLFVDLLEQCALVELDRLLQVVLQFVLADVQQAQLEPRAGLGVAHQLVQAAPGGFQ
LLQLGVVDDLVELVADQRIDLADAVVDHRHGVLVDGHALVEDLGGEFREHVAGIVLLAVVVGHAALGDDLVE
QGQGLGRTLAGLFGGG*

AnnotationID:5989 GeneID:5988

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:10

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11876

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29097