ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5985

TrivialName: PA14_34120

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_34120

PAO1 Ortholog Locus:

Sequence Length: 3906

Protein Length: 1301

Start: 3036135

Stop: 3032230

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC16118.1| (AF010496) potential exonuclease [Rhodobacter capsulatus] Identities = 169/680 (24%), Positives = 238/680 (35%), Gaps = 146/680 (21%)

Sequence:

GTGCGCACGCATCATGCGCAGCAGCGCCCAGGAGCCCTGGTAGCTCCAGCCGGCCTCGAGGTCGGCCACCGC
CAGGCTGGCCTGGCGCGGGTCGTCTGCCGGACGCTGCGAGCCGTTCTTCGCCCAGCGCAGCATGATCTTCAG
CGGATCGCCGACGTTCCAGGTCAGGCCCTTGTCCTGCGCGCCGGGGAACCGGCTTTCCTGGTCGCCCGAGTA
CAGGCTCCAGGCGATCACCTGGTCGGCGCCGCGTTCCAGGCTGCGGTCGCTGCGCCAGTCGATGTCCAGGGC
GACGCCGAGCAGGCCCGACTTGTCGCGCTCGAACAGCGGGCCGAGCCAGCGCTGCGCCTGCTCCAGGCGGCG
GACGAAGTCCTCGGCGGCCGGCAGGTCCGGCGAGCGAACCTGGGCCAGCCCTTCGCGCACCTGCGGCAAGCG
CGTCTCCATCAGCTTCAGCAGGTGCCGCACCCGCCCCGGCTCGGCATCGGCCGCTTCCAGGCTGTAGGCGAA
CGGGAAGCGTCCGGCGAGGTACTGGTTGAAGTAGTCGGCGAGGTCCTTCCAGGCCTGCGCCGCCTGCTGCTG
TTGCAACGACTGGCAGCGCCCGAGCGCGCCCTGGCGCAGGTCCACCAGGCGCGTCGCCAGGTCGCTGCGGCT
GGACGGCAGGAGCACGCCGTTGAGAATGTCGGCGCAACTGCCGATGTCCATCTGGTTGAAATCGTTACCCAC
CAGCTTCGCCAGCTGCGCCGCGGTGCTCGCCGGGTTGTCGGCCTTGAATTTCTGCAGTTCGGCGTTGAGCGC
GCTGAAGCGCACGAACGCGTTGTAGTCGGCGGTGGCCAGGCTGGACTGCTGCGCCTGCAGCCACTCCAGCGC
CGGGGCGTGGCGCTCGGCGACCGCGGCCATGGCATTGAACTGGCTGGTCAGGCTCTGCTTCAGCTCGGCGCT
GTCCTGGGCGCGGAACGCCTGCAGGCCGAAATTCGGCGCGCCCGACCAACGGCTGAAATCGACCGGCTCGCG
CAGCACCGCCTGCTCGTCGATGTCGCGCAGGGCCTGGCCGATATCGGCCACGGCCAGCGCGTTGAGGCTGGC
CAGCAGGCGCGCGCCGGCCTGCATGTCCTGCAACTCCAGCAGCGCCGCCTGCAATGCCTGGACCTGCTTGAC
CTGCACGTCGAAGCGCGAGGCATTGCGGCTGGTCAGGCTGCGACTGCGCGGCCCGAGGCTCTGCCACATGGC
CTCGGTCGTCGCGCTGGCGGCGGCGTGCAGGACCGAGTAGCGATAGCGCGGGTTGAGCGACGGCAGGGTGCT
CTCGTAGTAGCCGCTGAAGTCGTTGAAGAAGCTCAACGCCTGAGTCACGCCGATGTCGTCGATGCTCAGCAA
GGAGTGCTCCGCCAGTGTCTTGCCGGCCAGGGCCACGGAGACGAAGTCCTTGGTCTTCAGGTCATCGATGGC
GCGTTTCAGGCCGAGCAGGTCATCGGCCAGCTTGAGCGTCGCACCCTGTTTCACCAGCAGGCCGTCGCCGGC
AGCCTCCGGAGGCGCGATCCATTCGCTGCGGAACTGCTGCTGCAACTGCACCGTGAGGTTCTGCAGTTCCTC
CACGCGATCTCCCAGCAGGCTGCTTTGCTGGGCGCTCTTGAGCAGGTTCTGGTAGCCAGGGACGAGATCCTG
GCCGACGCCATTGCCCCAGATCAGGTTGATGCGGTTGACCTGCTGCTGCAGGTGGTTGATCAATTCGCCGAC
CCCCAGCAACTGGGCCGCCGTGGCATCTCGTTCCTGGCCGAGCTGCGCGAGTTCCTGGGTCAGGGCATTGCC
GGTGCGTTCCAGGCTGTCGGTGAGAAAGTAGGCGTTCAGCCAGCGTGCCATCAGGTCATGGAAGTTATCCGC
CGCCGTGGCGCCGACCCGGCCCAGGTCGAGGGCGGCGAGATCGGCCGGACGCTCGGCGAACAGCGTGCGGTT
GTAGTAGGCCAGGCGCGCCAGGCTGCCGCCGTTGTAGCTGCTGCCCAGGGCGTCGTTGCTCAGTTGCAGGAG
ATCGTCGAGCGGCGTCTTGCGGTTGTCGATGGCCTGGGCGAACAGGCGATTGTGGCGCTCCAGGGTAGTGGC
GCGGGCGACCAGGTCCTTCGCCGCCAGGTAGTCCTTCCACTGGCTGGGGTCGTCGCCCTCCTTCAGGCCGGG
CTGGCCGTCGCTGCGGATCGCCCGCAGGTCGCTCGCCTCGCCTTCCAGCAGGCTGCGCAGCGGGCGCACCAG
CAGGCGCTCGGAAACGCGGCGATACGCGCTGTCGATACGTGCATCCAGGGAGGAAAACCAGGAACTGGGGAA
CGCCAGCGAGGTGAAGCGCCAGCGCGGCGCCTGTGCCACCAGTTGCCACCAGGCCTGGACGTTCTGCCGGAC
CTGGGCGGCGCGCCGGGTGTCGTCGTCGAGCGGCTGGTAGCGCTCGCTGGCGCCATGCAGCAGTTGCGACAG
TTCGCCGGCGTCGCGCAGCGCGTCACGCCAGACCCAGGTCATCAGGCCGCCCCAGAGCAGGCACAGGCACAG
CGCAACGAGGCCGATACCGCGCTGCCAGCGCTGGCGCAGCTGGAGGATGCGCGGCACCGCCTGGGCCAGGCC
TTCCTCGGCAAGGATCCGCCGTGCCCACAGTTGGCTGGCGAAGCTGCTGCGCCGACGCGGCGCGTCGACCGC
CGGCAGGGCTTCGTCGCTTGCCGCCCCCGCCGCCTCGCTGCCGCTCAGGTAGAGACCGCGAAAGCGCGGCGC
CTCACCCCTGGCGTTGCCCTGGAAGACCGGTTCGAGCAGCGCCTGCAACGAACCGCGGAGGCTTTCCAGGCG
TGGCGGCAGGCAATACAGGTCGTTGTTCACCTGGCCGCGCAAGGTACCGAGTTCGACGATCGACTCGGTCAG
GGTGGCGGTGATTTCCTCCAGCGCCTGCTCGCACCAGCGCGACTGCCAGGCCGCCTCGGCGGCGAACGGCGA
GGACCAGCCGAGGGCGCGCTCGCGCGCCTCCTCGGGCAGCGCCGCGAGAAGTTCCTGGAAACCCGGCAGGTC
TTCCAGGCCAGTGATCACCACGTACACCGGCAGGCTCAGGCCAAGGCGCTGGGTCAGCTCCACGTAGCGACG
ACGGGCGGCGAGGCCGAGGGCGGCCGCCTGCTCGCCATCCTGCAACCGCGCCAGCGGAATGTTCCAGACCAC
CCCGTCCAGCGCGCGCCTGCCGCGCAGGCGCAGGAACAGACGCAACAGGCGCAGCCAGGCGCCGCTTTGCCG
GCGCAGGCCCTCGTCGGGCAGGAACACCGACTCGGGCACCAGCAGGATCGCCCCCTCGCCGTCCGACCACCA
GCGGCCGAACCAGGCCGGACGCGCCACCGGCAGCAGGCGCCAGGTAGCGCACAACTGCTCGCCCTCGGTCTC
GTTGCCGAGCATCAGCAGCCAGGGCGCTTCGTAGCGGCCCTGCCAGCCCTGCTCGCGCTCCATCTGCCGGAC
CGCCGCGTAGAAGCTGCGGATCTCCGTACCGCCCCGGGTCCGCCACCACCAGCCCAGCGCCCCCAGCAGCAG
CGCCAGCAGCAGCAGGAGGAGAACCAGCATGAACAGCGTCGCGCCGCTCATGGCGCCTGCTCCGCATCGGCC
AGGTGGGTCACCGCCGCCATTTCATGCTGGATGTCGCGCCAGAACAGGTGCCCGATGCCGCTCATCAGCAGC
ACCAGGCCGAGCACCGCCAGGCCCAGGCGGAAACCGTCCGGCAGCGCCGCGCGCACCGGCAGGCGCCGTGGC
GGCGCGGCGGCAGGCTGCTCAAGGCGACGGCCGAGGTCGGCGGCGTCCGCCTCGCGCTGCCAGGCGAAGGCG
AACAGCGCCTGCCGCCACTTCTCGTGCAGCGCCTCGCCGCGCGGCCCGCGCAGGCGACCGCGGAAGCCGAGG
ATCAGGCATTGCAGGTAG

Translation:

MRTHHAQQRPGALVAPAGLEVGHRQAGLARVVCRTLRAVLRPAQHDLQRIADVPGQALVLRAGEPAFLVARV
QAPGDHLVGAAFQAAVAAPVDVQGDAEQARLVALEQRAEPALRLLQAADEVLGGRQVRRANLGQPFAHLRQA
RLHQLQQVPHPPRLGIGRFQAVGEREASGEVLVEVVGEVLPGLRRLLLLQRLAAPERALAQVHQARRQVAAA
GRQEHAVENVGATADVHLVEIVTHQLRQLRRGARRVVGLEFLQFGVERAEAHERVVVGGGQAGLLRLQPLQR
RGVALGDRGHGIELAGQALLQLGAVLGAERLQAEIRRARPTAEIDRLAQHRLLVDVAQGLADIGHGQRVEAG
QQARAGLHVLQLQQRRLQCLDLLDLHVEARGIAAGQAATARPEALPHGLGRRAGGGVQDRVAIARVERRQGA
LVVAAEVVEEAQRLSHADVVDAQQGVLRQCLAGQGHGDEVLGLQVIDGAFQAEQVIGQLERRTLFHQQAVAG
SLRRRDPFAAELLLQLHREVLQFLHAISQQAALLGALEQVLVARDEILADAIAPDQVDAVDLLLQVVDQFAD
PQQLGRRGISFLAELREFLGQGIAGAFQAVGEKVGVQPACHQVMEVIRRRGADPAQVEGGEIGRTLGEQRAV
VVGQARQAAAVVAAAQGVVAQLQEIVERRLAVVDGLGEQAIVALQGSGAGDQVLRRQVVLPLAGVVALLQAG
LAVAADRPQVARLAFQQAAQRAHQQALGNAAIRAVDTCIQGGKPGTGERQRGEAPARRLCHQLPPGLDVLPD
LGGAPGVVVERLVALAGAMQQLRQFAGVAQRVTPDPGHQAAPEQAQAQRNEADTALPALAQLEDARHRLGQA
FLGKDPPCPQLAGEAAAPTRRVDRRQGFVACRPRRLAAAQVETAKARRLTPGVALEDRFEQRLQRTAEAFQA
WRQAIQVVVHLAAQGTEFDDRLGQGGGDFLQRLLAPARLPGRLGGERRGPAEGALARLLGQRREKFLETRQV
FQASDHHVHRQAQAKALGQLHVATTGGEAEGGRLLAILQPRQRNVPDHPVQRAPAAQAQEQTQQAQPGAALP
AQALVGQEHRLGHQQDRPLAVRPPAAEPGRTRHRQQAPGSAQLLALGLVAEHQQPGRFVAALPALLALHLPD
RRVEAADLRTAPGPPPPAQRPQQQRQQQQEENQHEQRRAAHGACSASARWVTAAISCWMSRQNRCPMPLISS
TRPSTARPRRKPSGSAARTGRRRGGAAAGCSRRRPRSAASASRCQAKANSACRHFSCSASPRGPRRRPRKPR
IRHCR*

AnnotationID:5986 GeneID:5985

AnnotatorUID: danlee

Modification Date/Time: 2006-04-04 11:11:16

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15836

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29091